Factsheet for HORVU5Hr1G082990.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
TargetP:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G018470.1
HORVU0Hr1G025410.1
HORVU1Hr1G008160.1
HORVU2Hr1G056160.5
HORVU2Hr1G067660.1
HORVU2Hr1G112000.1
HORVU3Hr1G021300.1
HORVU3Hr1G054660.1
HORVU3Hr1G113750.1
HORVU4Hr1G047410.2
HORVU4Hr1G048730.1
HORVU6Hr1G023630.1
HORVU7Hr1G078010.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34920.1	HORVU0Hr1G018470.1	AT1G22920.1	21798944
AT4G34920.1	HORVU0Hr1G025410.1	AT1G22920.1	21798944
AT4G34920.1	HORVU1Hr1G008160.1	AT1G22920.1	21798944
AT4G34920.1	HORVU2Hr1G056160.5	AT1G22920.1	21798944
AT4G34920.1	HORVU2Hr1G067660.1	AT1G22920.1	21798944
AT4G34920.1	HORVU2Hr1G112000.1	AT1G22920.1	21798944
AT4G34920.1	HORVU3Hr1G021300.1	AT1G22920.1	21798944
AT4G34920.1	HORVU3Hr1G054660.1	AT1G22920.1	21798944
AT4G34920.1	HORVU3Hr1G113750.1	AT1G22920.1	21798944
AT4G34920.1	HORVU4Hr1G047410.2	AT1G22920.1	21798944
AT4G34920.1	HORVU4Hr1G048730.1	AT1G22920.1	21798944
AT4G34920.1	HORVU6Hr1G023630.1	AT1G22920.1	21798944
AT4G34920.1	HORVU7Hr1G078010.1	AT1G22920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G327500.1	Wheat	cytosol	39.11	44.08
TraesCS5A01G327600.1	Wheat	cytosol	39.11	44.08
TraesCS5D01G333500.1	Wheat	cytosol	38.85	44.05
HORVU5Hr1G083100.1	Barley	plastid	31.23	36.84
HORVU5Hr1G045890.1	Barley	plastid	30.71	35.24
Zm00001d006231_P001	Maize	cytosol, mitochondrion	29.4	35.11
EER99259	Sorghum	cytosol	30.45	34.22
VIT_03s0038g02090.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	25.72	30.82
KRH51412	Soybean	cytosol	25.2	30.28
CDX90289	Canola	cytosol	24.41	29.25
Bra010731.1-P	Field mustard	cytosol	24.41	29.25
KRH24254	Soybean	cytosol	24.15	29.02
CDY12097	Canola	plasma membrane	24.15	28.93
AT4G38690.1	Thale cress	cytosol	23.62	28.3
PGSC0003DMT400004106	Potato	cytosol, nucleus, peroxisome	23.62	28.3
Solyc10g055240.1.1	Tomato	cytosol	23.36	27.99
PGSC0003DMT400059705	Potato	cytosol	23.36	27.99
Solyc01g111260.2.1	Tomato	nucleus	22.83	27.36
PGSC0003DMT400004107	Potato	cytosol, mitochondrion, plastid	22.83	26.93
Solyc01g111250.2.1	Tomato	cytosol, nucleus, peroxisome	22.31	26.73
AT4G34920.1	Thale cress	cytosol	21.78	26.1
CDY17493	Canola	peroxisome	21.26	25.47
CDY58810	Canola	peroxisome	21.0	25.08
Bra034663.1-P	Field mustard	cytosol	20.73	24.84
PGSC0003DMT400059701	Potato	cytosol	11.55	21.05
Bra034664.1-P	Field mustard	cytosol	19.68	20.16
CDX76304	Canola	cytoskeleton, cytosol, peroxisome	20.21	19.85
CDY58809	Canola	peroxisome	20.21	19.85
AT4G34930.1	Thale cress	plastid	19.68	19.18
KRH29259	Soybean	plasma membrane	12.6	18.97
CDY71207	Canola	cytoskeleton, cytosol, peroxisome	20.21	17.87
CDY17494	Canola	cytoskeleton, cytosol, peroxisome	20.21	17.3

Protein Annotations

EnsemblPlants:HORVU5Hr1G082990.1	EnsemblPlantsGene:HORVU5Hr1G082990	Gene3D:3.20.20.190	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR017946	InterPro:PLC-like_Pdiesterase_TIM-brl
ncoils:Coil	PANTHER:PTHR13593	PANTHER:PTHR13593:SF35	SEG:seg	SUPFAM:SSF51695	UniParc:UPI000B483E6E
UniProt:A0A287S1L1	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:568918329..568920481

Molecular Weight (calculated)

38882.1 Da

IEP (calculated)

12.527

GRAVY (calculated)

-0.899

Length

381 amino acids

Sequence
(BLAST)

001: MSSPPNSNDS GKKDPLDAMG AFFSAQMNRR KLVTTQKLAM SERCTSCGDE FPGCAHRPAD RKTWMSELGP DRLRLHQVVW PGSHDSATNR IGIPFITRPF
101: AQCQSLSCYH QLALGCRLLD VRVQEERRVX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXPRRARHLL GRRRARRRPA LPRRDRVRAP RPRDPHRVRP
201: RRPAGLRQVP GRAPRGAPDP AGRGGLRQDR RGAAPPAGHL RVEAAQVAGA RARRAAVELR VPAGQLDRHG PAGDQVREQP QVPRRAAAGE GPAVPVQGGE
301: HGDAAGRQPG GVRPAGHEPH PRLRAQLHRR GLRQGPRRPP PGLLHRLHRR RLRRRLRRRH QGPRRRRRVN LTGVPCMGLS A

Best Arabidopsis Sequence Match ( AT4G38690.1 )
(BLAST)

001: MGSHLSKQLE RRKAISTEKK ALTDLEKSCG CEFPGCDYMP SDRKNWMAGV GPEKLHINKI VWPGTHDSAT NKIGIRFVSR PFAKCQSLSI YNQLVAGTRV
101: LDIRVQEDRR VCHGILKTYS VDVVLADLKR FLSETESEIV ILEIRTEFGH EDPPEFDKYL VEQLGEHLIH QDDHVFSKTV AELLPKRVIC VWKPRKSPQP
201: KHGDPLWSAG YLKDNWIDTD LPSTKFESNI KHLSQQQPAT SRKFFYRVEN TVTPQPDNPI MCVKPVTKRI HCYAKVFIIE CVKRGCADKL QIFSTDFIDN
301: EFVDACVGLT FARAEGKA

Arabidopsis Description

AT4g38690/F20M13_250 [Source:UniProtKB/TrEMBL;Acc:Q9SZP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.