Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CAA33977 | Rice | plasma membrane | 99.07 | 99.07 |
| Solyc01g007530.2.1 | Tomato | plastid | 97.21 | 98.12 |
| KRH75043 | Soybean | endoplasmic reticulum, mitochondrion, plastid, vacuole | 49.3 | 91.38 |
| AGP50784 | Barley | plastid | 97.67 | 90.52 |
| HORVU6Hr1G049420.1 | Barley | mitochondrion | 97.67 | 90.52 |
| EES02990 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 97.21 | 90.09 |
| GRMZM5G800780_P01 | Maize | plastid | 97.21 | 90.09 |
| HORVU5Hr1G065020.1 | Barley | golgi, mitochondrion, plasma membrane | 97.21 | 90.09 |
| TraesCS5D01G221600.1 | Wheat | plasma membrane | 94.88 | 89.87 |
| TraesCS1D01G183000.1 | Wheat | plastid | 96.74 | 89.66 |
| TraesCS6A01G192500.1 | Wheat | plasma membrane | 94.88 | 87.93 |
| TraesCS1A01G130200.1 | Wheat | mitochondrion | 55.81 | 83.92 |
| CDX71257 | Canola | cytosol, plastid, vacuole | 38.14 | 83.67 |
| HORVU0Hr1G037920.1 | Barley | plasma membrane | 66.05 | 78.45 |
| HORVU2Hr1G062090.1 | Barley | plasma membrane | 81.4 | 75.43 |
| TraesCS5D01G009100.1 | Wheat | golgi, plastid, vacuole | 31.63 | 73.12 |
| HORVU1Hr1G063040.1 | Barley | plastid | 56.28 | 70.35 |
| HORVU7Hr1G052180.1 | Barley | plastid | 56.28 | 70.35 |
| HORVU1Hr1G003510.1 | Barley | extracellular, mitochondrion, peroxisome | 40.47 | 69.6 |
| PGSC0003DMT400049986 | Potato | cytosol, extracellular, golgi | 26.98 | 66.67 |
| Solyc07g032450.1.1 | Tomato | plasma membrane, plastid, vacuole | 20.93 | 65.22 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 17.21 | 38.14 |
| ATMG00220.1 | Thale cress | mitochondrion, plasma membrane | 23.72 | 12.98 |
| AT2G07727.1 | Thale cress | mitochondrion, plasma membrane | 23.72 | 12.98 |
| HORVU6Hr1G049430.1 | Barley | endoplasmic reticulum, vacuole | 8.37 | 12.95 |
| HORVU0Hr1G034350.1 | Barley | endoplasmic reticulum, vacuole | 8.37 | 12.95 |
| Solyc01g007540.2.1 | Tomato | plastid | 7.91 | 12.23 |
| GRMZM5G884960_P01 | Maize | plastid | 8.84 | 10.92 |
Protein Annotations
| MapMan:1.1.2.2 | Gene3D:1.20.810.10 | EntrezGene:844729 | ArrayExpress:ATCG00720 | EnsemblPlantsGene:ATCG00720 | RefSeq:ATCG00720 |
| TAIR:ATCG00720 | RefSeq:ATCG00720-TAIR-G | EnsemblPlants:ATCG00720.1 | TAIR:ATCG00720.1 | ProteinID:BAA84415.1 | InterPro:Cyt_B6_PetB |
| InterPro:Cyt_b/b6_N | InterPro:Cytb/b6-like_sf | InterPro:Di-haem_cyt_TM | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009507 | GO:GO:0009534 | GO:GO:0009535 |
| GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016491 | GO:GO:0020037 | GO:GO:0022900 | GO:GO:0022904 | GO:GO:0045158 | GO:GO:0046872 |
| GO:GO:0055114 | InterPro:IPR005797 | InterPro:IPR027387 | HAMAP:MF_00633 | RefSeq:NP_051088.1 | UniProt:P56773 |
| Symbol:PETB | PFAM:PF00033 | PIRSF:PIRSF000032 | PFscan:PS51002 | PANTHER:PTHR19271 | PANTHER:PTHR19271:SF8 |
| SUPFAM:SSF81342 | TMHMM:TMhelix | UniParc:UPI00001288C2 | SEG:seg | : | : |
Description
PETBCytochrome b6 [Source:UniProtKB/Swiss-Prot;Acc:P56773]
Coordinates
chrPt:+:74841..76292
Molecular Weight (calculated)
24154.0 Da
IEP (calculated)
8.984
GRAVY (calculated)
0.572
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKVYDWFEE RLEIQAIADD ITSKYVPPHV NIFYCLGGIT LTCFLVQVAT GFAMTFYYRP TVTEAFASVQ YIMTEANFGW LIRSVHRWSA SMMVLMMILH
101: VFRVYLTGGF KKPRELTWVT GVVLGVLTAS FGVTGYSLPW DQIGYWAVKI VTGVPDAIPV IGSPLVELLR GSASVGQSTL TRFYSLHTFV LPLLTAVFML
201: MHFLMIRKQG ISGPL
101: VFRVYLTGGF KKPRELTWVT GVVLGVLTAS FGVTGYSLPW DQIGYWAVKI VTGVPDAIPV IGSPLVELLR GSASVGQSTL TRFYSLHTFV LPLLTAVFML
201: MHFLMIRKQG ISGPL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.