Factsheet for Bra035554.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20787	Canola	endoplasmic reticulum, extracellular, vacuole	83.11	85.27
AT5G55120.1	Thale cress	cytosol	57.26	78.65
Bra019082.1-P	Field mustard	cytosol	47.97	71.9
Bra026398.1-P	Field mustard	cytosol	51.69	70.51
Bra010424.1-P	Field mustard	cytosol	51.18	68.71
KRH46222	Soybean	cytosol	45.95	68.0
KRH14364	Soybean	cytosol	47.8	64.91
KRG98713	Soybean	cytosol	47.64	64.83
Solyc06g073320.2.1	Tomato	cytosol	47.47	64.3
PGSC0003DMT400069484	Potato	cytosol	47.3	63.93
KRH73776	Soybean	cytosol	47.13	63.55
GSMUA_Achr10P...	Banana	cytosol	45.95	62.67
VIT_19s0090g01000.t01	Wine grape	cytosol	47.3	61.95
Os12t0190000-01	Rice	cytosol	45.61	61.64
TraesCS4A01G201200.1	Wheat	cytosol	44.76	61.48
TraesCS4D01G102200.1	Wheat	cytosol	44.59	61.25
TraesCS4B01G105300.2	Wheat	cytosol	44.43	61.02
GSMUA_Achr6P12830_001	Banana	cytosol	44.76	60.92
HORVU4Hr1G017030.1	Barley	cytosol	44.09	60.56
TraesCS5A01G107800.2	Wheat	cytosol	43.92	60.47
EES16792	Sorghum	cytosol	44.43	60.46
TraesCS5D01G122900.1	Wheat	cytosol	43.75	60.23
TraesCS5B01G111700.2	Wheat	cytosol	43.41	59.77
HORVU5Hr1G031870.1	Barley	cytosol	43.07	59.03
GSMUA_Achr6P07340_001	Banana	cytosol	41.05	56.78
Zm00001d035337_P001	Maize	cytosol	43.58	55.6
GSMUA_Achr6P17590_001	Banana	cytosol	17.4	49.05

Protein Annotations

MapMan:10.3.1.5	MapMan:11.10.2.2.1	EnsemblPlantsGene:Bra035554	EnsemblPlants:Bra035554.1	EnsemblPlants:Bra035554.1-P	InterPro:GDPGP
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009753	GO:GO:0009987	GO:GO:0010193	GO:GO:0010475
GO:GO:0016740	GO:GO:0019853	GO:GO:0080046	GO:GO:0080048	UniProt:M4F3A4	PFAM:PF04885
PFAM:PF16269	PANTHER:PTHR20884	PANTHER:PTHR20884:SF11	SignalP:SignalP-TM	InterPro:Stig1	TMHMM:TMhelix
UniParc:UPI0002546670	SEG:seg	:	:	:	:

Description

AT5G55120 (E=9e-121) VTC5 | VTC5 (VITAMIN C DEFECTIVE 5); GDP-D-glucose phosphorylase/ galactose-1-phosphate guanylyltransferase (GDP)/ quercetin 4'-O-glucosyltransferase

Coordinates

chrA02:-:7544812..7550063

Molecular Weight (calculated)

65840.7 Da

IEP (calculated)

5.241

GRAVY (calculated)

-0.223

Length

592 amino acids

Sequence
(BLAST)

001: MVQLMKLLVT IALTMAITIA IITTTTTRTN TTTTATFALD DPFEDHTPPG TVKTRPSRFL SEKVDNGQGP KARNPNAADH CNKEPEICSS SYYNTGANST
101: MVCCNNKCMD LSTDDKNCGA CKNKCKFGQT CCRGQCVYVA YDKRHCGTKD PVCGLSSLQL VLFGGSELLD LFVVFGALFP PQSTIKRVPT VVSNHQKDET
201: AEEEEGEGCG RNILSKCCIN VERLPLYTCK PAEENVTFLE SLLLGEWEDR FQRGLFRYDV TACETKVIPG KYGFIAQLNE GRHLKKRPTE FRVDKVLQPF
301: DANKFNFTKV CREELLFQFE ADMPLDVDNS PNVVAINVSP IEYGHVLLIP RVLDCLPQRI DHKSLLLALH MAVEAANPYF RVGYNSLGAF ATINHLHFQA
401: YYLAMPFPIE KAHSLKITTT NDGVRISKLM SYPVRGLLFE GGNSIKELSD DVSNASVCLQ NNNISFNILI SDSGKRIFLL PQCYAEKQAL GGVSSELLDT
501: QVNPAVWEMS GHMVLKRKKD YEGATEEKAR SLLAEVSLSE ERFKEVNTMI FEAIGCSAEE EEEEELEEES SISGGFIRVN CCISVKEEAV SN

Best Arabidopsis Sequence Match ( AT5G55120.1 )
(BLAST)

001: MLLKIKRVPT VVSNYQKDET VEEGGCGRNC LSKCCINGAR LPLYTCKNLD KSVGENTESP VTFLESLVIG EWEDRFQRGL FRYDVTACET KVIPGKYGFI
101: AQLNEGRHLK KRPTEFRVDK VLQPFDGNKF NFTKVGQEEL LFQFKASTND DDSEIQFLAS MPLDADNSPS VVAINVSPIE YGHVLLIPRV LDCLPQRIDH
201: KSLLLALQMA AEADNPYFRL GYNSLGAFAT INHLHFQAYY LAMQFPIEKA SSLKITTTNN GVKISKLLNY PVRGLLVEGG NTIKDLADTV SDASVCLQNN
301: NIPFNILISD SGKRIFLLPQ CYAEKQALGE VSSTLLDTQV NPAVWEMSGH MVLKRKEDYE GASEEKAWRL LAEVSLSEER FREVNTMIFD AIGFSSHEEE
401: EEEELEEQNS MNGGSFTIVH CPSVKEEAVS N

Arabidopsis Description

VTC5VTC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UIM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.