Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014991.1-P | Field mustard | cytosol | 42.51 | 94.32 |
| CDX77477 | Canola | cytosol | 42.51 | 94.32 |
| AT3G23880.1 | Thale cress | cytosol | 37.03 | 83.52 |
| KRH11340 | Soybean | cytosol, peroxisome, plastid | 13.52 | 28.98 |
| KRH20939 | Soybean | cytosol, mitochondrion | 13.64 | 27.59 |
| KRH11341 | Soybean | cytosol, plastid | 12.3 | 25.7 |
| VIT_18s0041g01100.t01 | Wine grape | cytosol | 7.55 | 25.51 |
| KRH35044 | Soybean | cytosol, extracellular, golgi | 10.96 | 25.07 |
| VIT_18s0041g01090.t01 | Wine grape | cytosol | 11.45 | 23.68 |
| KRH35047 | Soybean | cytosol, peroxisome, plastid | 10.96 | 22.9 |
| KRH72048 | Soybean | cytosol | 9.26 | 21.53 |
| CDY58343 | Canola | cytosol | 10.47 | 21.29 |
| CDY08063 | Canola | cytosol | 10.11 | 20.65 |
| CDX78638 | Canola | cytosol | 9.74 | 20.46 |
| CDX76370 | Canola | cytosol | 10.11 | 20.39 |
| CDX97333 | Canola | cytosol | 8.28 | 20.3 |
| CDX78640 | Canola | cytosol | 9.38 | 19.85 |
| CDY67179 | Canola | cytosol | 10.11 | 19.39 |
| CDX78639 | Canola | cytosol | 9.14 | 19.23 |
| CDX78642 | Canola | cytosol | 8.77 | 18.05 |
| CDX70626 | Canola | cytosol | 9.38 | 17.82 |
| CDX78641 | Canola | cytosol | 8.65 | 17.75 |
| CDX78643 | Canola | cytosol | 9.26 | 17.51 |
| CDY27453 | Canola | cytosol, mitochondrion | 1.1 | 9.38 |
| CDX78644 | Canola | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.6 | EnsemblPlants:CDX85142 | ProteinID:CDX85142 | ProteinID:CDX85142.1 | ncoils:Coil |
| InterPro:F-box-assoc_dom_typ1 | InterPro:F-box-assoc_interact_dom | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00142702001 | InterPro:IPR001810 | PFAM:PF00646 | PFAM:PF07734 | PFscan:PS50181 |
| PANTHER:PTHR36037 | SMART:SM00256 | SUPFAM:SSF81383 | TIGRFAMs:TIGR01640 | UniParc:UPI0004EEEC9F | SEG:seg |
Description
BnaC07g07640D
Coordinates
chrLK031840:-:1339491..1344194
Molecular Weight (calculated)
93280.6 Da
IEP (calculated)
5.576
GRAVY (calculated)
-0.293
Length
821 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDHPHDESF DLQEIHSRVK ELEYRHRNCI DESVESIPCG FEALAQDYAL QLETKVKEIV EDYCHVDSMD VEESDAYLEY LRKELHSAEA ESAQVSQEIE
101: RLSKSHAKDC TSLEADLEGL LLSIDFLTSQ DVNKSKENLP SSSLMEVCDV DYDAKFKMCE LENQIEEKRV VLKSLEDLDS VRKRLDATEQ IEDAFTGLRV
201: LKFDENFITL QLRTCIPKLD GLLGQHDLVH TTEPSELIHE LLIHLKDKTT EITKVEMLPN DVYIGDIIDA ADPFRQIRLH SALLDTRSSL QWLVAKVKER
301: IISATLRKCM AKSSKTIRHT FEYYDKDETI VAHTAGGIDA FLKVSDGWPL LNSPLKLASL KNSENHSNGI SLSLICKVEE LANSLDLQTR QNLSSFMDAI
401: EKILMQQSRE ELNSSEPSQK FDMKEPNFYC PITSSAKKSA VPLLTLMEEP TIESFFFSPT NLPPEMMEEI LLRLPVKSLK RFKCVCTSWR SLISETLFIL
501: KHALWLEASK ATTSKKSPYG VITTSRYHLK SCCVHSLYNQ PMANVFEHDG ELLGRDYYQV VGTCNGLVCF HVDYNKSFYL WNPTIKLQQR LRGSDLETGD
601: EAVVNYGFGY DESEDDYKIV ALLQQRKIGA LLQQRKREVM VYSTRKKLWR RSSSNTCFPS GVVLANKSRS GIYINGTLNW AATHSSSSVS TIISYDMSRD
701: VFKELLGPGC CKRGCFTMTL GDLRGCLSMV CYCKGANADV WVMKEFGEGE SWSKLLSIPG LTEFVRPLWI SRGLVVLLEF RSGLALYNCA NGKFQYPVQD
801: SLSSCRDAKV YIKTLVSPRD L
101: RLSKSHAKDC TSLEADLEGL LLSIDFLTSQ DVNKSKENLP SSSLMEVCDV DYDAKFKMCE LENQIEEKRV VLKSLEDLDS VRKRLDATEQ IEDAFTGLRV
201: LKFDENFITL QLRTCIPKLD GLLGQHDLVH TTEPSELIHE LLIHLKDKTT EITKVEMLPN DVYIGDIIDA ADPFRQIRLH SALLDTRSSL QWLVAKVKER
301: IISATLRKCM AKSSKTIRHT FEYYDKDETI VAHTAGGIDA FLKVSDGWPL LNSPLKLASL KNSENHSNGI SLSLICKVEE LANSLDLQTR QNLSSFMDAI
401: EKILMQQSRE ELNSSEPSQK FDMKEPNFYC PITSSAKKSA VPLLTLMEEP TIESFFFSPT NLPPEMMEEI LLRLPVKSLK RFKCVCTSWR SLISETLFIL
501: KHALWLEASK ATTSKKSPYG VITTSRYHLK SCCVHSLYNQ PMANVFEHDG ELLGRDYYQV VGTCNGLVCF HVDYNKSFYL WNPTIKLQQR LRGSDLETGD
601: EAVVNYGFGY DESEDDYKIV ALLQQRKIGA LLQQRKREVM VYSTRKKLWR RSSSNTCFPS GVVLANKSRS GIYINGTLNW AATHSSSSVS TIISYDMSRD
701: VFKELLGPGC CKRGCFTMTL GDLRGCLSMV CYCKGANADV WVMKEFGEGE SWSKLLSIPG LTEFVRPLWI SRGLVVLLEF RSGLALYNCA NGKFQYPVQD
801: SLSSCRDAKV YIKTLVSPRD L
001: MEEETHDGSL DLQEIRRRVK ELDFFPRNCR EEPVESCSSD YETLVVQDFV LQFEPKVKEI VEEYGDVDLL DVEDSDAYLE YLRNELQSVE AESAKVSEEI
101: ERLSQSHAQD SSRLQRDLEG LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD SLRKRFDAAE QVEDALTGLK
201: VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301: KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA
401: IEKILVEQTR EELQSNKSSQ K
101: ERLSQSHAQD SSRLQRDLEG LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD SLRKRFDAAE QVEDALTGLK
201: VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301: KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA
401: IEKILVEQTR EELQSNKSSQ K
Arabidopsis Description
HAPp48,5 protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:P92952]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.