Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35044 | Soybean | cytosol, extracellular, golgi | 47.33 | 51.81 |
| KRH72048 | Soybean | cytosol | 45.8 | 50.99 |
| KRH11340 | Soybean | cytosol, peroxisome, plastid | 35.62 | 36.55 |
| KRH20939 | Soybean | cytosol, mitochondrion | 36.13 | 34.98 |
| KRH11341 | Soybean | cytosol, plastid | 30.79 | 30.79 |
| PGSC0003DMT400006240 | Potato | mitochondrion | 25.19 | 30.18 |
| Solyc01g067030.2.1 | Tomato | extracellular | 27.99 | 29.81 |
| PGSC0003DMT400058350 | Potato | cytosol, extracellular, plasma membrane, plastid | 27.99 | 29.73 |
| PGSC0003DMT400055826 | Potato | cytosol, extracellular, plasma membrane | 25.19 | 29.55 |
| PGSC0003DMT400035180 | Potato | golgi, nucleus, plastid | 27.74 | 28.84 |
| Solyc10g008450.1.1 | Tomato | extracellular, vacuole | 25.19 | 28.37 |
| PGSC0003DMT400080382 | Potato | golgi | 26.97 | 28.19 |
| PGSC0003DMT400016504 | Potato | cytosol | 27.48 | 27.98 |
| PGSC0003DMT400076274 | Potato | cytosol | 27.48 | 27.91 |
| Solyc09g091710.1.1 | Tomato | nucleus | 28.5 | 27.86 |
| PGSC0003DMT400008824 | Potato | extracellular, golgi, plastid | 26.21 | 27.84 |
| PGSC0003DMT400059337 | Potato | cytosol, plasma membrane | 26.21 | 27.69 |
| PGSC0003DMT400076275 | Potato | nucleus | 28.24 | 27.61 |
| PGSC0003DMT400008825 | Potato | extracellular, golgi, plastid | 25.95 | 27.57 |
| Solyc09g083230.1.1 | Tomato | cytosol, peroxisome, plastid | 26.72 | 27.56 |
| PGSC0003DMT400009785 | Potato | cytosol | 26.46 | 27.44 |
| PGSC0003DMT400009708 | Potato | cytosol, peroxisome, plastid | 22.9 | 27.44 |
| PGSC0003DMT400035091 | Potato | mitochondrion | 27.23 | 27.3 |
| PGSC0003DMT400031977 | Potato | cytosol | 27.48 | 27.2 |
| PGSC0003DMT400055337 | Potato | plastid | 27.99 | 27.09 |
| PGSC0003DMT400076216 | Potato | cytosol | 26.72 | 26.99 |
| PGSC0003DMT400096925 | Potato | cytosol | 17.3 | 26.98 |
| Solyc01g067010.2.1 | Tomato | cytosol, extracellular, plasma membrane | 25.45 | 26.95 |
| Solyc05g007530.1.1 | Tomato | cytosol | 25.45 | 26.88 |
| Solyc09g091690.1.1 | Tomato | cytosol | 26.46 | 26.8 |
| PGSC0003DMT400025788 | Potato | cytosol | 26.72 | 26.79 |
| Solyc02g033040.2.1 | Tomato | nucleus | 23.16 | 26.76 |
| Solyc05g005110.1.1 | Tomato | mitochondrion, plastid | 27.48 | 26.67 |
| PGSC0003DMT400015598 | Potato | cytosol, nucleus, peroxisome, plastid | 26.97 | 26.5 |
| PGSC0003DMT400034123 | Potato | golgi | 24.68 | 26.43 |
| VIT_18s0041g01100.t01 | Wine grape | cytosol | 16.29 | 26.34 |
| PGSC0003DMT400009709 | Potato | cytosol | 25.19 | 26.19 |
| Solyc09g091220.1.1 | Tomato | cytosol | 26.46 | 26.13 |
| Solyc10g052710.1.1 | Tomato | cytosol | 25.19 | 25.92 |
| PGSC0003DMT400059327 | Potato | cytosol | 24.17 | 25.75 |
| PGSC0003DMT400080239 | Potato | cytosol, plastid | 20.87 | 25.71 |
| PGSC0003DMT400092235 | Potato | cytosol | 21.63 | 25.68 |
| Solyc09g072930.1.1 | Tomato | cytosol, plasma membrane | 25.19 | 25.65 |
| AT3G23880.1 | Thale cress | cytosol | 23.41 | 25.27 |
| Solyc05g007400.1.1 | Tomato | cytosol | 24.17 | 25.0 |
| PGSC0003DMT400096151 | Potato | cytosol | 25.19 | 24.87 |
| Bra014991.1-P | Field mustard | cytosol | 23.41 | 24.86 |
| PGSC0003DMT400090382 | Potato | cytosol | 24.17 | 24.74 |
| PGSC0003DMT400094422 | Potato | extracellular, golgi, plastid | 22.14 | 24.65 |
| PGSC0003DMT400095263 | Potato | cytosol | 17.05 | 24.63 |
| PGSC0003DMT400059330 | Potato | extracellular | 23.66 | 24.6 |
| CDX77477 | Canola | cytosol | 22.9 | 24.32 |
| PGSC0003DMT400067303 | Potato | extracellular | 22.65 | 24.32 |
| PGSC0003DMT400080369 | Potato | nucleus | 24.68 | 24.31 |
| PGSC0003DMT400085500 | Potato | cytosol | 23.66 | 24.28 |
| PGSC0003DMT400076284 | Potato | cytosol | 25.95 | 24.06 |
| Solyc09g072910.1.1 | Tomato | plasma membrane | 26.72 | 24.03 |
| Solyc10g068340.1.1 | Tomato | cytosol | 15.78 | 23.85 |
| PGSC0003DMT400076282 | Potato | nucleus | 9.41 | 23.42 |
| KRH51164 | Soybean | cytosol | 22.9 | 23.38 |
| PGSC0003DMT400030295 | Potato | cytosol | 11.7 | 23.23 |
| PGSC0003DMT400093810 | Potato | plastid | 16.54 | 23.21 |
| PGSC0003DMT400045556 | Potato | cytosol | 27.23 | 23.16 |
| KRH11533 | Soybean | cytosol | 23.16 | 23.1 |
| VIT_18s0041g01090.t01 | Wine grape | cytosol | 23.16 | 22.92 |
| Solyc10g075010.1.1 | Tomato | extracellular | 20.61 | 22.82 |
| KRH36548 | Soybean | cytosol, plastid | 22.65 | 22.7 |
| Solyc05g007360.1.1 | Tomato | extracellular | 23.16 | 22.69 |
| PGSC0003DMT400059329 | Potato | vacuole | 22.9 | 22.44 |
| KRH01989 | Soybean | cytosol | 22.14 | 22.19 |
| Solyc05g007370.1.1 | Tomato | golgi, mitochondrion, plasma membrane | 21.88 | 22.11 |
| Solyc05g007380.1.1 | Tomato | endoplasmic reticulum, golgi | 22.39 | 21.78 |
| PGSC0003DMT400015653 | Potato | cytosol, plastid | 27.23 | 21.75 |
| PGSC0003DMT400080292 | Potato | cytosol | 10.94 | 21.72 |
| PGSC0003DMT400090333 | Potato | cytosol | 17.05 | 21.61 |
| PGSC0003DMT400088797 | Potato | cytosol | 13.49 | 21.54 |
| PGSC0003DMT400094202 | Potato | cytosol | 15.52 | 21.25 |
| Solyc07g052580.1.1 | Tomato | cytosol, peroxisome, plastid | 23.41 | 21.25 |
| PGSC0003DMT400096882 | Potato | cytosol, plasma membrane, plastid | 14.5 | 20.65 |
| PGSC0003DMT400053926 | Potato | cytosol | 13.74 | 20.53 |
| PGSC0003DMT400053922 | Potato | extracellular, golgi | 21.37 | 20.1 |
| PGSC0003DMT400097507 | Potato | cytosol | 11.96 | 19.75 |
| PGSC0003DMT400031274 | Potato | extracellular, plasma membrane | 8.91 | 19.44 |
| PGSC0003DMT400059334 | Potato | plastid | 17.3 | 18.89 |
| PGSC0003DMT400080293 | Potato | nucleus | 9.67 | 14.96 |
| CDX85142 | Canola | cytosol | 22.9 | 10.96 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.6 | UniProt:A0A0R0HX77 | EMBL:ACUP02006650 | InterPro:F-box-assoc_interact_dom | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | EnsemblPlantsGene:GLYMA_10G220500 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031146 | InterPro:IPR001810 | EnsemblPlants:KRH35047 |
| ProteinID:KRH35047 | ProteinID:KRH35047.1 | PFAM:PF00646 | PFscan:PS50181 | PANTHER:PTHR44355 | PANTHER:PTHR44355:SF1 |
| SMART:SM00256 | SUPFAM:SSF81383 | TIGRFAMs:TIGR01640 | UniParc:UPI0003DEC112 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:-:45186649..45187830
Molecular Weight (calculated)
45300.1 Da
IEP (calculated)
9.023
GRAVY (calculated)
-0.171
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKNTHCHSV STQTMPETTA KIPKLVSPTG DEYPSCHSLA VLPYDLIWEI LLRVPVRSLI LFKCVCKSWK TLISDPQFAK DHLCISTADP NMTHQRIVAR
101: HHRDILSFSV QSLLQNPSNP AKPHSWRMSH KYCIVGSCNG LLCLSRFKHG YCRLRLWNPC TGLKSKRLSI GFYPVDITFH GLGYDHVNHR YKLLAGVVDY
201: FETQTKIYSF GSDSSTLIQN QNLPREPIRM QGKFVSGTLN WIIEKGTSDD HQWVILSLDM VTETFGEVFL PKCVEDSEKI CHPILGVSRD CLFVCFLDSK
301: KAHWSVLMMK EYGVRDSWTK LLMTPHISIF RTQYLYPLFE TLRISENGVV LLRTRTNLLL YNSNDGWLVY PRIRRKLGFD MHIYHESLVS PKS
101: HHRDILSFSV QSLLQNPSNP AKPHSWRMSH KYCIVGSCNG LLCLSRFKHG YCRLRLWNPC TGLKSKRLSI GFYPVDITFH GLGYDHVNHR YKLLAGVVDY
201: FETQTKIYSF GSDSSTLIQN QNLPREPIRM QGKFVSGTLN WIIEKGTSDD HQWVILSLDM VTETFGEVFL PKCVEDSEKI CHPILGVSRD CLFVCFLDSK
301: KAHWSVLMMK EYGVRDSWTK LLMTPHISIF RTQYLYPLFE TLRISENGVV LLRTRTNLLL YNSNDGWLVY PRIRRKLGFD MHIYHESLVS PKS
001: MDETTREMFS PHNLPLEMME EILLRLPVKS LTRFKCVCSS WRSLISETLF ALKHALILET SKATTSTKSP YGVITTSRYH LKSCCIHSLY NASTVYVSEH
101: DGELLGRDYY QVVGTCHGLV CFHVDYDKSL YLWNPTIKLQ QRLSSSDLET SDDECVVTYG FGYDESEDDY KVVALLQQRH QVKIETKIYS TRQKLWRSNT
201: SFPSGVVVAD KSRSGIYING TLNWAATSSS SSWTIISYDM SRDEFKELPG PVCCGRGCFT MTLGDLRGCL SMVCYCKGAN ADVWVMKEFG EVYSWSKLLS
301: IPGLTDFVRP LWISDGLVVL LEFRSGLALY NCSNGRFHYP VSNSISGCRD AKVYLKTMVS PNDL
101: DGELLGRDYY QVVGTCHGLV CFHVDYDKSL YLWNPTIKLQ QRLSSSDLET SDDECVVTYG FGYDESEDDY KVVALLQQRH QVKIETKIYS TRQKLWRSNT
201: SFPSGVVVAD KSRSGIYING TLNWAATSSS SSWTIISYDM SRDEFKELPG PVCCGRGCFT MTLGDLRGCL SMVCYCKGAN ADVWVMKEFG EVYSWSKLLS
301: IPGLTDFVRP LWISDGLVVL LEFRSGLALY NCSNGRFHYP VSNSISGCRD AKVYLKTMVS PNDL
Arabidopsis Description
F-box/kelch-repeat protein At3g23880 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIR8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.