Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH35044 | Soybean | cytosol, extracellular, golgi | 47.88 | 47.08 |
KRH35047 | Soybean | cytosol, peroxisome, plastid | 50.99 | 45.8 |
KRH11340 | Soybean | cytosol, peroxisome, plastid | 32.86 | 30.29 |
KRH20939 | Soybean | cytosol, mitochondrion | 33.43 | 29.06 |
PGSC0003DMT400009708 | Potato | cytosol, peroxisome, plastid | 26.91 | 28.96 |
PGSC0003DMT400096925 | Potato | cytosol | 19.83 | 27.78 |
PGSC0003DMT400095263 | Potato | cytosol | 21.25 | 27.57 |
PGSC0003DMT400055826 | Potato | cytosol, extracellular, plasma membrane | 26.06 | 27.46 |
PGSC0003DMT400006240 | Potato | mitochondrion | 25.21 | 27.13 |
PGSC0003DMT400058350 | Potato | cytosol, extracellular, plasma membrane, plastid | 28.05 | 26.76 |
KRH11341 | Soybean | cytosol, plastid | 29.75 | 26.72 |
PGSC0003DMT400080239 | Potato | cytosol, plastid | 24.08 | 26.65 |
Solyc01g067030.2.1 | Tomato | extracellular | 27.76 | 26.56 |
Solyc02g033040.2.1 | Tomato | nucleus | 25.5 | 26.47 |
PGSC0003DMT400035180 | Potato | golgi, nucleus, plastid | 28.33 | 26.45 |
PGSC0003DMT400076274 | Potato | cytosol | 28.33 | 25.84 |
PGSC0003DMT400080382 | Potato | golgi | 27.2 | 25.53 |
Solyc09g091710.1.1 | Tomato | nucleus | 28.9 | 25.37 |
PGSC0003DMT400035091 | Potato | mitochondrion | 28.05 | 25.26 |
Solyc09g083230.1.1 | Tomato | cytosol, peroxisome, plastid | 27.2 | 25.2 |
PGSC0003DMT400009709 | Potato | cytosol | 26.91 | 25.13 |
Solyc10g068340.1.1 | Tomato | cytosol | 18.41 | 25.0 |
PGSC0003DMT400059337 | Potato | cytosol, plasma membrane | 26.06 | 24.73 |
PGSC0003DMT400076275 | Potato | nucleus | 28.05 | 24.63 |
PGSC0003DMT400009785 | Potato | cytosol | 26.35 | 24.54 |
PGSC0003DMT400059327 | Potato | cytosol | 25.5 | 24.39 |
Solyc10g008450.1.1 | Tomato | extracellular, vacuole | 24.08 | 24.36 |
PGSC0003DMT400059330 | Potato | extracellular | 26.06 | 24.34 |
Solyc05g007530.1.1 | Tomato | cytosol | 25.5 | 24.19 |
Solyc10g075010.1.1 | Tomato | extracellular | 24.08 | 23.94 |
PGSC0003DMT400016504 | Potato | cytosol | 26.06 | 23.83 |
PGSC0003DMT400080292 | Potato | cytosol | 13.31 | 23.74 |
Solyc05g005110.1.1 | Tomato | mitochondrion, plastid | 27.2 | 23.7 |
PGSC0003DMT400031977 | Potato | cytosol | 26.63 | 23.68 |
PGSC0003DMT400055337 | Potato | plastid | 26.91 | 23.4 |
Solyc09g072930.1.1 | Tomato | cytosol, plasma membrane | 25.5 | 23.32 |
Solyc10g052710.1.1 | Tomato | cytosol | 25.21 | 23.3 |
PGSC0003DMT400025788 | Potato | cytosol | 25.78 | 23.21 |
PGSC0003DMT400090382 | Potato | cytosol | 24.93 | 22.92 |
Solyc05g007400.1.1 | Tomato | cytosol | 24.65 | 22.89 |
PGSC0003DMT400096882 | Potato | cytosol, plasma membrane, plastid | 17.85 | 22.83 |
PGSC0003DMT400085500 | Potato | cytosol | 24.65 | 22.72 |
PGSC0003DMT400094422 | Potato | extracellular, golgi, plastid | 22.66 | 22.66 |
PGSC0003DMT400015598 | Potato | cytosol, nucleus, peroxisome, plastid | 25.5 | 22.5 |
PGSC0003DMT400067303 | Potato | extracellular | 23.23 | 22.4 |
PGSC0003DMT400076216 | Potato | cytosol | 24.65 | 22.36 |
PGSC0003DMT400096151 | Potato | cytosol | 25.21 | 22.36 |
PGSC0003DMT400034123 | Potato | golgi | 23.23 | 22.34 |
KRH51164 | Soybean | cytosol | 24.36 | 22.34 |
PGSC0003DMT400076284 | Potato | cytosol | 26.63 | 22.17 |
PGSC0003DMT400092235 | Potato | cytosol | 20.68 | 22.05 |
KRH36548 | Soybean | cytosol, plastid | 24.36 | 21.94 |
KRH01989 | Soybean | cytosol | 24.36 | 21.94 |
Solyc09g091690.1.1 | Tomato | cytosol | 24.08 | 21.91 |
PGSC0003DMT400008825 | Potato | extracellular, golgi, plastid | 22.95 | 21.89 |
PGSC0003DMT400008824 | Potato | extracellular, golgi, plastid | 22.95 | 21.89 |
Solyc09g091220.1.1 | Tomato | cytosol | 24.65 | 21.86 |
Solyc05g007370.1.1 | Tomato | golgi, mitochondrion, plasma membrane | 24.08 | 21.85 |
PGSC0003DMT400080369 | Potato | nucleus | 24.65 | 21.8 |
KRH11533 | Soybean | cytosol | 24.08 | 21.57 |
PGSC0003DMT400093810 | Potato | plastid | 17.0 | 21.43 |
VIT_18s0041g01100.t01 | Wine grape | cytosol | 14.73 | 21.4 |
Solyc01g067010.2.1 | Tomato | cytosol, extracellular, plasma membrane | 22.38 | 21.29 |
PGSC0003DMT400053926 | Potato | cytosol | 15.86 | 21.29 |
AT3G23880.1 | Thale cress | cytosol | 21.53 | 20.88 |
Bra014991.1-P | Field mustard | cytosol | 21.81 | 20.81 |
CDX77477 | Canola | cytosol | 21.81 | 20.81 |
Solyc05g007380.1.1 | Tomato | endoplasmic reticulum, golgi | 23.8 | 20.79 |
PGSC0003DMT400059329 | Potato | vacuole | 23.51 | 20.7 |
VIT_18s0041g01090.t01 | Wine grape | cytosol | 22.66 | 20.15 |
PGSC0003DMT400045556 | Potato | cytosol | 26.35 | 20.13 |
Solyc05g007360.1.1 | Tomato | extracellular | 22.66 | 19.95 |
PGSC0003DMT400088797 | Potato | cytosol | 13.88 | 19.92 |
PGSC0003DMT400094202 | Potato | cytosol | 16.15 | 19.86 |
Solyc09g072910.1.1 | Tomato | plasma membrane | 24.08 | 19.45 |
Solyc07g052580.1.1 | Tomato | cytosol, peroxisome, plastid | 23.8 | 19.4 |
PGSC0003DMT400090333 | Potato | cytosol | 17.0 | 19.35 |
PGSC0003DMT400015653 | Potato | cytosol, plastid | 26.35 | 18.9 |
PGSC0003DMT400053922 | Potato | extracellular, golgi | 22.1 | 18.66 |
PGSC0003DMT400059334 | Potato | plastid | 18.98 | 18.61 |
PGSC0003DMT400097507 | Potato | cytosol | 11.33 | 16.81 |
PGSC0003DMT400031274 | Potato | extracellular, plasma membrane | 8.22 | 16.11 |
PGSC0003DMT400076282 | Potato | nucleus | 7.08 | 15.82 |
PGSC0003DMT400080293 | Potato | nucleus | 10.48 | 14.57 |
PGSC0003DMT400030295 | Potato | cytosol | 7.93 | 14.14 |
CDX85142 | Canola | cytosol | 21.53 | 9.26 |
Protein Annotations
Gene3D:1.20.1280.50 | EntrezGene:102666059 | MapMan:19.2.2.8.1.4.6 | UniProt:A0A0R0KYN2 | EMBL:ACUP02001157 | InterPro:F-box-assoc_dom_typ1 |
InterPro:F-box-assoc_interact_dom | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | EnsemblPlantsGene:GLYMA_02G188000 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | InterPro:IPR001810 | EnsemblPlants:KRH72048 | ProteinID:KRH72048 | ProteinID:KRH72048.1 | PFAM:PF00646 |
PFAM:PF07734 | PANTHER:PTHR44355 | PANTHER:PTHR44355:SF1 | SMART:SM00256 | SUPFAM:SSF81383 | TIGRFAMs:TIGR01640 |
UniParc:UPI0003DEBC97 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:34824517..34828786
Molecular Weight (calculated)
39501.1 Da
IEP (calculated)
7.697
GRAVY (calculated)
0.020
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEITTKMPK ILLSPTAGGE SESPRCHASP VLLEELISNI LHRVPVRSLL QFKCVCKSWN SLISDPLFAK DHLCASTADP NMTHQRLLSF TVCDPKIVSF
101: PMHLLLQNPP TPAKPLCSSS LNDSYLILGS CNGLLCLYHI PRCYVALWNP SIRFTSKRLP TGLSPGEGFS TFHGFGYDAV NDKYKLLLAM RVLGETVTKI
201: YTFGADSSCK VIQNLPLDPH PTERLGKFVS GTLNWIAPKM GVSDEKWVIC SFDFATETSG QVVLPYGDRD NVCKPVINAV RNCLCVCFFD SRKAHWAVWL
301: MKEYGVQDSW TKLMVIPRFV QEDSWPWKLI PHDELCTCRG FPALEPLCIS GNE
101: PMHLLLQNPP TPAKPLCSSS LNDSYLILGS CNGLLCLYHI PRCYVALWNP SIRFTSKRLP TGLSPGEGFS TFHGFGYDAV NDKYKLLLAM RVLGETVTKI
201: YTFGADSSCK VIQNLPLDPH PTERLGKFVS GTLNWIAPKM GVSDEKWVIC SFDFATETSG QVVLPYGDRD NVCKPVINAV RNCLCVCFFD SRKAHWAVWL
301: MKEYGVQDSW TKLMVIPRFV QEDSWPWKLI PHDELCTCRG FPALEPLCIS GNE
001: MDETTREMFS PHNLPLEMME EILLRLPVKS LTRFKCVCSS WRSLISETLF ALKHALILET SKATTSTKSP YGVITTSRYH LKSCCIHSLY NASTVYVSEH
101: DGELLGRDYY QVVGTCHGLV CFHVDYDKSL YLWNPTIKLQ QRLSSSDLET SDDECVVTYG FGYDESEDDY KVVALLQQRH QVKIETKIYS TRQKLWRSNT
201: SFPSGVVVAD KSRSGIYING TLNWAATSSS SSWTIISYDM SRDEFKELPG PVCCGRGCFT MTLGDLRGCL SMVCYCKGAN ADVWVMKEFG EVYSWSKLLS
301: IPGLTDFVRP LWISDGLVVL LEFRSGLALY NCSNGRFHYP VSNSISGCRD AKVYLKTMVS PNDL
101: DGELLGRDYY QVVGTCHGLV CFHVDYDKSL YLWNPTIKLQ QRLSSSDLET SDDECVVTYG FGYDESEDDY KVVALLQQRH QVKIETKIYS TRQKLWRSNT
201: SFPSGVVVAD KSRSGIYING TLNWAATSSS SSWTIISYDM SRDEFKELPG PVCCGRGCFT MTLGDLRGCL SMVCYCKGAN ADVWVMKEFG EVYSWSKLLS
301: IPGLTDFVRP LWISDGLVVL LEFRSGLALY NCSNGRFHYP VSNSISGCRD AKVYLKTMVS PNDL
Arabidopsis Description
F-box/kelch-repeat protein At3g23880 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIR8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.