CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51164	Soybean	cytosol	88.78	90.39
KRH36548	Soybean	cytosol, plastid	55.61	55.61
KRH11533	Soybean	cytosol	55.87	55.58
Solyc01g008660.2.1	Tomato	cytosol	28.32	32.27
AT4G12560.2	Thale cress	cytosol	32.65	30.99
CDX78638	Canola	cytosol	30.61	30.69
CDX76370	Canola	cytosol	31.12	29.98
Bra006309.1-P	Field mustard	cytosol	29.08	28.79
Bra018485.1-P	Field mustard	cytosol	30.1	28.71
Bra006310.1-P	Field mustard	cytosol	26.53	28.18
Bra020847.1-P	Field mustard	cytosol	28.83	27.97
KRH35044	Soybean	cytosol, extracellular, golgi	25.26	27.58
PGSC0003DMT400054287	Potato	cytosol, extracellular, mitochondrion, plastid	13.27	27.51
CDX78640	Canola	cytosol	27.04	27.32
Bra006311.1-P	Field mustard	cytosol	27.3	27.3
AT4G22390.1	Thale cress	cytosol	27.81	27.11
CDY67179	Canola	cytosol	29.59	27.1
CDX97333	Canola	cytosol	22.96	26.87
KRH11340	Soybean	cytosol, peroxisome, plastid	26.02	26.63
CDX78642	Canola	cytosol	27.04	26.57
KRH11341	Soybean	cytosol, plastid	26.53	26.46
CDX78639	Canola	cytosol	26.28	26.41
CDX78641	Canola	cytosol	26.02	25.5
CDX70626	Canola	cytosol	28.06	25.46
KRH20939	Soybean	cytosol, mitochondrion	26.28	25.37
Bra006312.1-P	Field mustard	cytosol	25.51	25.0
KRH72048	Soybean	cytosol	21.94	24.36
CDX78643	Canola	cytosol	26.79	24.19
KRH35047	Soybean	cytosol, peroxisome, plastid	22.19	22.14
Bra006313.1-P	Field mustard	plasma membrane	27.81	12.84
CDX78644	Canola	plasma membrane	1.79	1.62

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100791213	MapMan:19.2.2.8.1.4.6	EMBL:ACUP02010293	InterPro:F-box-assoc_dom_typ1	InterPro:F-box-assoc_interact_dom
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_17G008200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Gal_Oxase/kelch_b-propeller	UniProt:I1MR05	InterPro:IPR001810	EnsemblPlants:KRH01989	ProteinID:KRH01989	ProteinID:KRH01989.1
ProteinID:KRH01990.1	PFAM:PF00646	PFAM:PF07734	PFscan:PS50181	PANTHER:PTHR31790	PANTHER:PTHR31790:SF34
SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	TIGRFAMs:TIGR01640	UniParc:UPI0001CA9145	:

Description

hypothetical protein

Coordinates

chr17:+:685577..688365

Molecular Weight (calculated)

44652.0 Da

IEP (calculated)

8.731

GRAVY (calculated)

-0.158

Length

392 amino acids

Sequence
(BLAST)

001: MHANPITVSN MANLPVEVVT EILSRLPVKS VIRLRSTCKW WRSIIDSRHF ILFHLNKSHT SLILRHRSQL YSLDLKSLLD PNPFELSHPL MCYSNSIKVL
101: GSSNGLLCIS NVADDIALWN PFLRKHRILP SDRFHRPESS LFAARVYGFG HHPPSNDYKL LSITYFVDLH KRTFDSQVQL YTLKSDSWKN LPSMPYALCC
201: ARTMGVFVSG SLHWLVTRKL QPDEPDLIVA FDLTSETFCE VPLPATVNGN FDMQVALLGG CLCVVEHRGT GFHVWVMRVY GSRDSWEKLF SLTENHHHEM
301: GSGKLKYVRP LALDDGDRVL FEHNRSKLCW YDLKTGDVSC VKLPSGIGNT IEGTVCVQSL VPPTLLSLRD ESQEKNRKKR DDFLSKGFKL TL

Best Arabidopsis Sequence Match ( AT4G12560.1 )
(BLAST)

001: MATIPMDIVN DIFLRLPAKT LVRCRALSKP CYHLINDPDF IESHLHRVLQ TGDHLMILLR GALRLYSVDL DSLDSVSDVE HPMKRGGPTE VFGSSNGLIG
101: LSNSPTDLAV FNPSTRQIHR LPPSSIDLPD GSSTRGYVFY GLGYDSVSDD YKVVRMVQFK IDSEDELGCS FPYEVKVFSL KKNSWKRIES VASSIQLLFY
201: FYYHLLYRRG YGVLAGNSLH WVLPRRPGLI AFNLIVRFDL ALEEFEIVRF PEAVANGNVD IQMDIGVLDG CLCLMCNYDQ SYVDVWMMKE YNVRDSWTKV
301: FTVQKPKSVK SFSYMRPLVY SKDKKKVLLE LNNTKLVWFD LESKKMSTLR IKDCPSSYSA ELVVSSLVLG CKGDLNNIKY RKEQQAKEAR EAKIMQNTKR
401: RDDFLSKGFK LVL

Arabidopsis Description

CPR1F-box protein CPR30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.