Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 2
- mitochondrion 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055826 | Potato | cytosol, extracellular, plasma membrane | 81.95 | 85.37 |
| Solyc01g067010.2.1 | Tomato | cytosol, extracellular, plasma membrane | 61.32 | 57.68 |
| Solyc09g091690.1.1 | Tomato | cytosol | 52.15 | 46.91 |
| KRH11340 | Soybean | cytosol, peroxisome, plastid | 34.1 | 31.07 |
| Solyc10g052710.1.1 | Tomato | cytosol | 33.81 | 30.89 |
| Solyc09g091220.1.1 | Tomato | cytosol | 33.52 | 29.4 |
| KRH20939 | Soybean | cytosol, mitochondrion | 34.1 | 29.31 |
| Solyc01g067030.2.1 | Tomato | extracellular | 30.66 | 29.0 |
| KRH35044 | Soybean | cytosol, extracellular, golgi | 29.51 | 28.69 |
| Solyc09g091710.1.1 | Tomato | nucleus | 32.66 | 28.36 |
| VIT_18s0041g01100.t01 | Wine grape | cytosol | 19.48 | 27.98 |
| Solyc02g033040.2.1 | Tomato | nucleus | 26.93 | 27.65 |
| Solyc05g005110.1.1 | Tomato | mitochondrion, plastid | 31.52 | 27.16 |
| Solyc05g007530.1.1 | Tomato | cytosol | 28.94 | 27.15 |
| KRH11341 | Soybean | cytosol, plastid | 29.8 | 26.46 |
| Solyc05g007400.1.1 | Tomato | cytosol | 28.65 | 26.32 |
| Solyc12g099550.1.1 | Tomato | cytosol | 25.21 | 26.11 |
| Solyc09g083230.1.1 | Tomato | cytosol, peroxisome, plastid | 28.37 | 25.98 |
| Solyc09g072930.1.1 | Tomato | cytosol, plasma membrane | 28.65 | 25.91 |
| KRH35047 | Soybean | cytosol, peroxisome, plastid | 28.37 | 25.19 |
| Solyc10g075010.1.1 | Tomato | extracellular | 25.5 | 25.07 |
| Solyc10g068340.1.1 | Tomato | cytosol | 18.05 | 24.23 |
| KRH72048 | Soybean | cytosol | 24.36 | 24.08 |
| Solyc09g072910.1.1 | Tomato | plasma membrane | 30.09 | 24.03 |
| Solyc07g052580.1.1 | Tomato | cytosol, peroxisome, plastid | 29.51 | 23.79 |
| VIT_18s0041g01090.t01 | Wine grape | cytosol | 26.65 | 23.43 |
| Solyc01g008660.2.1 | Tomato | cytosol | 22.92 | 23.26 |
| Bra014991.1-P | Field mustard | cytosol | 23.78 | 22.43 |
| AT3G23880.1 | Thale cress | cytosol | 23.21 | 22.25 |
| Solyc05g007360.1.1 | Tomato | extracellular | 25.21 | 21.95 |
| Solyc05g007380.1.1 | Tomato | endoplasmic reticulum, golgi | 24.36 | 21.04 |
| Solyc05g007370.1.1 | Tomato | golgi, mitochondrion, plasma membrane | 23.21 | 20.82 |
Protein Annotations
| EnsemblPlants:Solyc10g008450.1.1 | EnsemblPlantsGene:Solyc10g008450.1 | InterPro:F-box-assoc_dom_typ1 | InterPro:F-box-assoc_interact_dom | PANTHER:PTHR44355 | PANTHER:PTHR44355:SF1 |
| PFAM:PF07734 | SEG:seg | TIGRFAMs:TIGR01640 | UniParc:UPI000276B991 | UniProt:K4CY22 | MapMan:19.2.2.8.1.4.6 |
Description
No Description!
Coordinates
chr10:+:2574498..2575547
Molecular Weight (calculated)
38990.9 Da
IEP (calculated)
8.188
GRAVY (calculated)
0.052
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSLLKFRCV SKSWFFLLSS PLFSKTHVDF CLKNPNLTGY RLAVVASVYG SGRKCNFYNL GFENSCLSLA RNSCPVKSLA ISARILGSCN GLICLTSDSF
101: TLMLLNPCTG KVNVFPDSML RSNGGGGGGV GCFIRYGFGY DASFEDYKVV KIFSFPHIEG RFENMVSVYS LKAKSWKMIE GFNSSSLNGK VGVFVNGALH
201: WEACHSHCSG LFWEIVILDL AVERYGKIAL PSYEDGGVYW TLSVSRGYLV GCCNYEKNKA DVWVMKEYGV EESWTKLVTI LLPVHRRAYI LPLFVAENCD
301: EFLLQLGEEL ALYNSRDGSY KRLDGYSSGD YFRQAQATTY FESLASPHM
101: TLMLLNPCTG KVNVFPDSML RSNGGGGGGV GCFIRYGFGY DASFEDYKVV KIFSFPHIEG RFENMVSVYS LKAKSWKMIE GFNSSSLNGK VGVFVNGALH
201: WEACHSHCSG LFWEIVILDL AVERYGKIAL PSYEDGGVYW TLSVSRGYLV GCCNYEKNKA DVWVMKEYGV EESWTKLVTI LLPVHRRAYI LPLFVAENCD
301: EFLLQLGEEL ALYNSRDGSY KRLDGYSSGD YFRQAQATTY FESLASPHM
001: MATIPMDIVN DIFLRLPAKT LVRCRALSKP CYHLINDPDF IESHLHRVLQ TGDHLMILLR GALRLYSVDL DSLDSVSDVE HPMKRGGPTE VFGSSNGLIG
101: LSNSPTDLAV FNPSTRQIHR LPPSSIDLPD GSSTRGYVFY GLGYDSVSDD YKVVRMVQFK IDSEDELGCS FPYEVKVFSL KKNSWKRIES VASSIQLLFY
201: FYYHLLYRRG YGVLAGNSLH WVLPRRPGLI AFNLIVRFDL ALEEFEIVRF PEAVANGNVD IQMDIGVLDG CLCLMCNYDQ SYVDVWMMKE YNVRDSWTKV
301: FTVQKPKSVK SFSYMRPLVY SKDKKKVLLE LNNTKLVWFD LESKKMSTLR IKDCPSSYSA ELVVSSLVLG CKGDLNNIKY RKEQQAKEAR EAKIMQNTKR
401: RDDFLSKGFK LVL
101: LSNSPTDLAV FNPSTRQIHR LPPSSIDLPD GSSTRGYVFY GLGYDSVSDD YKVVRMVQFK IDSEDELGCS FPYEVKVFSL KKNSWKRIES VASSIQLLFY
201: FYYHLLYRRG YGVLAGNSLH WVLPRRPGLI AFNLIVRFDL ALEEFEIVRF PEAVANGNVD IQMDIGVLDG CLCLMCNYDQ SYVDVWMMKE YNVRDSWTKV
301: FTVQKPKSVK SFSYMRPLVY SKDKKKVLLE LNNTKLVWFD LESKKMSTLR IKDCPSSYSA ELVVSSLVLG CKGDLNNIKY RKEQQAKEAR EAKIMQNTKR
401: RDDFLSKGFK LVL
Arabidopsis Description
CPR1F-box protein CPR30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.