Factsheet for Solyc09g091690.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076216	Potato	cytosol	91.49	91.26
Solyc01g067010.2.1	Tomato	cytosol, extracellular, plasma membrane	50.52	52.83
Solyc10g008450.1.1	Tomato	extracellular, vacuole	46.91	52.15
KRH11340	Soybean	cytosol, peroxisome, plastid	33.25	33.68
Solyc01g067030.2.1	Tomato	extracellular	31.96	33.6
Solyc10g052710.1.1	Tomato	cytosol	32.73	33.25
Solyc09g091220.1.1	Tomato	cytosol	33.76	32.91
KRH20939	Soybean	cytosol, mitochondrion	34.02	32.51
Solyc02g033040.2.1	Tomato	nucleus	28.35	32.35
Solyc09g091710.1.1	Tomato	nucleus	33.51	32.34
Solyc09g083230.1.1	Tomato	cytosol, peroxisome, plastid	31.19	31.76
Solyc05g007530.1.1	Tomato	cytosol	29.38	30.65
Solyc10g075010.1.1	Tomato	extracellular	27.06	29.58
KRH35044	Soybean	cytosol, extracellular, golgi	27.32	29.53
Solyc10g068340.1.1	Tomato	cytosol	19.59	29.23
Solyc09g072930.1.1	Tomato	cytosol, plasma membrane	28.87	29.02
Solyc05g007400.1.1	Tomato	cytosol	28.35	28.95
VIT_18s0041g01100.t01	Wine grape	cytosol	18.04	28.81
KRH11341	Soybean	cytosol, plastid	29.12	28.75
Solyc01g008660.2.1	Tomato	cytosol	25.26	28.49
Solyc12g099550.1.1	Tomato	cytosol	24.48	28.19
Solyc05g005110.1.1	Tomato	mitochondrion, plastid	29.38	28.15
Solyc09g072910.1.1	Tomato	plasma membrane	30.93	27.46
KRH35047	Soybean	cytosol, peroxisome, plastid	26.8	26.46
VIT_18s0041g01090.t01	Wine grape	cytosol	26.8	26.2
Solyc05g007370.1.1	Tomato	golgi, mitochondrion, plasma membrane	26.03	25.96
AT3G23880.1	Thale cress	cytosol	24.23	25.82
Solyc05g007360.1.1	Tomato	extracellular	26.55	25.69
Solyc07g052580.1.1	Tomato	cytosol, peroxisome, plastid	28.35	25.4
Bra014991.1-P	Field mustard	cytosol	23.71	24.86
KRH72048	Soybean	cytosol	21.91	24.08
Solyc05g007380.1.1	Tomato	endoplasmic reticulum, golgi	24.74	23.76

Protein Annotations

EnsemblPlants:Solyc09g091690.1.1	EnsemblPlantsGene:Solyc09g091690.1	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR44355	PANTHER:PTHR44355:SF1
PFAM:PF00646	PFscan:PS50181	SEG:seg	SMART:SM00256	SUPFAM:SSF81383	TIGRFAMs:TIGR01640
UniParc:UPI000276B5B4	UniProt:K4CWJ5	MapMan:19.2.2.8.1.4.6	:	:	:

Description

No Description!

Coordinates

chr9:+:70938293..70939459

Molecular Weight (calculated)

43044.7 Da

IEP (calculated)

6.731

GRAVY (calculated)

-0.044

Length

388 amino acids

Sequence
(BLAST)

001: METQNKLAEA KIPQELLQFS CLPDEIIIEI LLRLPVKSIL KFRCVSKSWL SLISTPYFIN TQIKFCVKKS KNVNLRLVIV ASVAGLMGKM CSVYSLDCEN
101: SSVNVDKIDY PLKPPFGSAK FLGSCNGLIC LTPMSFKLMI WNPVTGKHKE FEDSFVQCAV NCYIRYGFGY DYVNDDYKVV KIFSFPRNEG RYENKVKVYS
201: LKYDSWKMGE AFDSGYVNAQ SGMCLNGYLH WEVSHCRDSG DGDGGGGSSE IMTLDLSTET YGIMALPNCG NGNTSWSLSV LNGCLVACCN YHSVRTDMWV
301: MKEYGVESSW TKLVSNITAP SGRLGYVSPL SVSENGGEVL VRLGTNISLY NARNASHESL DIHSLGYCLQ VQAITYIESL ASPNVGDT

Best Arabidopsis Sequence Match ( AT3G06240.1 )
(BLAST)

001: MKAIQLLWEA IMEATKRERR REDDDGEKAS PESLVLPPEI ITEILLRLPA KSIGRFRCVS KLFCTLSSDP GFAKIHLDLI LRNESVRSLH RKLIVSSHNL
101: YSLDFNSIGD GIRDLAAVEH NYPLKDDPSI FSEMIRNYVG DHLYDDRRVM LKLNAKSYRR NWVEIVGSSN GLVCISPGEG AVFLYNPTTG DSKRLPENFR
201: PKSVEYERDN FQTYGFGFDG LTDDYKLVKL VATSEDILDA SVYSLKADSW RRICNLNYEH NDGSYTSGVH FNGAIHWVFT ESRHNQRVVV AFDIQTEEFR
301: EMPVPDEAED CSHRFSNFVV GSLNGRLCVV NSCYDVHDDI WVMSEYGEAK SWSRIRINLL YRSMKPLCST KNDEEVLLEL DGDLVLYNFE TNASSNLGIC
401: GVKLSDGFEA NTYVESLISP NSYGIES

Arabidopsis Description

F-box/kelch-repeat protein At3g06240 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.