Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 2
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400067303 | Potato | extracellular | 77.37 | 91.53 |
| Solyc05g007530.1.1 | Tomato | cytosol | 61.89 | 72.04 |
| Solyc05g007400.1.1 | Tomato | cytosol | 43.65 | 49.74 |
| Solyc05g007360.1.1 | Tomato | extracellular | 40.42 | 43.64 |
| Solyc05g007370.1.1 | Tomato | golgi, mitochondrion, plasma membrane | 36.49 | 40.62 |
| Solyc09g091710.1.1 | Tomato | nucleus | 36.95 | 39.8 |
| Solyc05g007380.1.1 | Tomato | endoplasmic reticulum, golgi | 36.03 | 38.61 |
| Solyc09g083230.1.1 | Tomato | cytosol, peroxisome, plastid | 31.64 | 35.96 |
| Solyc02g033040.2.1 | Tomato | nucleus | 28.18 | 35.88 |
| Solyc10g068340.1.1 | Tomato | cytosol | 20.79 | 34.62 |
| Solyc09g072930.1.1 | Tomato | cytosol, plasma membrane | 30.72 | 34.46 |
| Solyc10g075010.1.1 | Tomato | extracellular | 27.25 | 33.24 |
| Solyc05g005110.1.1 | Tomato | mitochondrion, plastid | 30.25 | 32.35 |
| Solyc10g052710.1.1 | Tomato | cytosol | 28.41 | 32.2 |
| Solyc01g067030.2.1 | Tomato | extracellular | 26.56 | 31.17 |
| KRH11340 | Soybean | cytosol, peroxisome, plastid | 26.79 | 30.29 |
| Solyc09g072910.1.1 | Tomato | plasma membrane | 30.25 | 29.98 |
| Solyc10g008450.1.1 | Tomato | extracellular, vacuole | 23.79 | 29.51 |
| KRH20939 | Soybean | cytosol, mitochondrion | 27.25 | 29.06 |
| Solyc09g091690.1.1 | Tomato | cytosol | 25.4 | 28.35 |
| KRH11341 | Soybean | cytosol, plastid | 24.94 | 27.48 |
| KRH35044 | Soybean | cytosol, extracellular, golgi | 22.63 | 27.3 |
| Solyc09g091220.1.1 | Tomato | cytosol | 24.94 | 27.14 |
| Solyc01g067010.2.1 | Tomato | cytosol, extracellular, plasma membrane | 23.09 | 26.95 |
| VIT_18s0041g01100.t01 | Wine grape | cytosol | 14.78 | 26.34 |
| Bra014991.1-P | Field mustard | cytosol | 21.94 | 25.68 |
| Solyc12g099550.1.1 | Tomato | cytosol | 19.4 | 24.93 |
| KRH72048 | Soybean | cytosol | 19.4 | 23.8 |
| VIT_18s0041g01090.t01 | Wine grape | cytosol | 21.71 | 23.68 |
| AT3G23880.1 | Thale cress | cytosol | 19.86 | 23.63 |
| KRH35047 | Soybean | cytosol, peroxisome, plastid | 21.25 | 23.41 |
| Solyc01g008660.2.1 | Tomato | cytosol | 18.01 | 22.67 |
Protein Annotations
| MapMan:19.2.2.8.1.4.6 | InterPro:F-box-assoc_dom_typ1 | InterPro:F-box-assoc_interact_dom | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0031146 | InterPro:Gal_Oxase/kelch_b-propeller | InterPro:IPR001810 | UniProt:K4CFF7 | PFAM:PF00646 | PFAM:PF07734 |
| PANTHER:PTHR44355 | PANTHER:PTHR44355:SF1 | SMART:SM00256 | SUPFAM:SSF50965 | SUPFAM:SSF81383 | EnsemblPlantsGene:Solyc07g052580.1 |
| EnsemblPlants:Solyc07g052580.1.1 | TIGRFAMs:TIGR01640 | UniParc:UPI000276B832 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7:-:61061992..61063899
Molecular Weight (calculated)
49021.6 Da
IEP (calculated)
7.894
GRAVY (calculated)
-0.046
Length
433 amino acids
Sequence
(BLAST)
(BLAST)
001: MGARAKAAEG KSNHQQISVS PCLPWIPLPT TIKTKCCWIL TKRPCFATKI TLTEVVTKKK IKILPKGVIM AILLKVPPKS MLKFMGVSKP WLRLISSRKL
101: VKTHVKLTAN DKECSNDRVI FQDSTGNFKV SPLPPLFRKE QRIELFNMDS PMENPNTYTK IVGSVNGLIC MYSKIEEPVL WNPTIRKCKK MPTFEANLRR
201: GCSYYLNYGF GYDESHDDYK VVVVQCIYDD GGSYDTVVNI YSLRTDSWRT IDKFQGNFLI NSPGKFVDGK LYWALSADIN TFNICNIISL DLADETWKSL
301: MLPTSYGEGI YPLALGVFGN DLSVLCLNCH EVTNSDVWIM KHSGVEVSWT KIFTIDHPKD LGEFIFFSSI FSVPSCQSNK GELFLLLLPP VIMIYDCSTR
401: QLEAVDHFEE CFAAEIYVES LVDPLLIAQN DNS
101: VKTHVKLTAN DKECSNDRVI FQDSTGNFKV SPLPPLFRKE QRIELFNMDS PMENPNTYTK IVGSVNGLIC MYSKIEEPVL WNPTIRKCKK MPTFEANLRR
201: GCSYYLNYGF GYDESHDDYK VVVVQCIYDD GGSYDTVVNI YSLRTDSWRT IDKFQGNFLI NSPGKFVDGK LYWALSADIN TFNICNIISL DLADETWKSL
301: MLPTSYGEGI YPLALGVFGN DLSVLCLNCH EVTNSDVWIM KHSGVEVSWT KIFTIDHPKD LGEFIFFSSI FSVPSCQSNK GELFLLLLPP VIMIYDCSTR
401: QLEAVDHFEE CFAAEIYVES LVDPLLIAQN DNS
001: MATIPMDIVN DIFLRLPAKT LVRCRALSKP CYHLINDPDF IESHLHRVLQ TGDHLMILLR GALRLYSVDL DSLDSVSDVE HPMKRGGPTE VFGSSNGLIG
101: LSNSPTDLAV FNPSTRQIHR LPPSSIDLPD GSSTRGYVFY GLGYDSVSDD YKVVRMVQFK IDSEDELGCS FPYEVKVFSL KKNSWKRIES VASSIQLLFY
201: FYYHLLYRRG YGVLAGNSLH WVLPRRPGLI AFNLIVRFDL ALEEFEIVRF PEAVANGNVD IQMDIGVLDG CLCLMCNYDQ SYVDVWMMKE YNVRDSWTKV
301: FTVQKPKSVK SFSYMRPLVY SKDKKKVLLE LNNTKLVWFD LESKKMSTLR IKDCPSSYSA ELVVSSLVLG CKGDLNNIKY RKEQQAKEAR EAKIMQNTKR
401: RDDFLSKGFK LVL
101: LSNSPTDLAV FNPSTRQIHR LPPSSIDLPD GSSTRGYVFY GLGYDSVSDD YKVVRMVQFK IDSEDELGCS FPYEVKVFSL KKNSWKRIES VASSIQLLFY
201: FYYHLLYRRG YGVLAGNSLH WVLPRRPGLI AFNLIVRFDL ALEEFEIVRF PEAVANGNVD IQMDIGVLDG CLCLMCNYDQ SYVDVWMMKE YNVRDSWTKV
301: FTVQKPKSVK SFSYMRPLVY SKDKKKVLLE LNNTKLVWFD LESKKMSTLR IKDCPSSYSA ELVVSSLVLG CKGDLNNIKY RKEQQAKEAR EAKIMQNTKR
401: RDDFLSKGFK LVL
Arabidopsis Description
CPR1F-box protein CPR30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.