Factsheet for Solyc01g067010.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, cytosol

Predictor Summary:

plastid 1
extracellular 1
nucleus 1
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008825	Potato	extracellular, golgi, plastid	91.37	91.62
PGSC0003DMT400008824	Potato	extracellular, golgi, plastid	90.84	91.08
Solyc10g008450.1.1	Tomato	extracellular, vacuole	57.68	61.32
Solyc09g091690.1.1	Tomato	cytosol	52.83	50.52
Solyc01g067030.2.1	Tomato	extracellular	31.27	31.44
Solyc09g091220.1.1	Tomato	cytosol	33.69	31.41
Solyc02g033040.2.1	Tomato	nucleus	28.57	31.18
Solyc10g052710.1.1	Tomato	cytosol	31.81	30.89
KRH11340	Soybean	cytosol, peroxisome, plastid	31.0	30.03
Solyc09g091710.1.1	Tomato	nucleus	31.81	29.35
KRH20939	Soybean	cytosol, mitochondrion	31.81	29.06
Solyc09g083230.1.1	Tomato	cytosol, peroxisome, plastid	29.38	28.61
KRH11341	Soybean	cytosol, plastid	30.19	28.5
Solyc05g007530.1.1	Tomato	cytosol	28.03	27.96
Solyc09g072930.1.1	Tomato	cytosol, plasma membrane	28.84	27.72
Solyc05g005110.1.1	Tomato	mitochondrion, plastid	29.65	27.16
KRH35044	Soybean	cytosol, extracellular, golgi	26.15	27.02
Solyc10g068340.1.1	Tomato	cytosol	18.6	26.54
VIT_18s0041g01100.t01	Wine grape	cytosol	17.25	26.34
Solyc09g072910.1.1	Tomato	plasma membrane	30.46	25.86
Solyc12g099550.1.1	Tomato	cytosol	23.45	25.82
KRH35047	Soybean	cytosol, peroxisome, plastid	26.95	25.45
Solyc10g075010.1.1	Tomato	extracellular	24.26	25.35
Solyc05g007400.1.1	Tomato	cytosol	25.61	25.0
VIT_18s0041g01090.t01	Wine grape	cytosol	26.15	24.43
AT3G23880.1	Thale cress	cytosol	22.91	23.35
Solyc07g052580.1.1	Tomato	cytosol, peroxisome, plastid	26.95	23.09
Bra014991.1-P	Field mustard	cytosol	22.91	22.97
Solyc01g008660.2.1	Tomato	cytosol	21.29	22.97
KRH72048	Soybean	cytosol	21.29	22.38
Solyc05g007360.1.1	Tomato	extracellular	23.72	21.95
Solyc05g007370.1.1	Tomato	golgi, mitochondrion, plasma membrane	21.83	20.82
Solyc05g007380.1.1	Tomato	endoplasmic reticulum, golgi	21.02	19.31

Protein Annotations

MapMan:19.2.2.8.1.4.6	Gene3D:3.80.10.10	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	InterPro:IPR032675	UniProt:K4AWV0
InterPro:LRR_dom_sf	PFAM:PF00646	PFscan:PS50181	PANTHER:PTHR44355	PANTHER:PTHR44355:SF1	SMART:SM00256
SUPFAM:SSF50965	SUPFAM:SSF81383	EnsemblPlantsGene:Solyc01g067010.2	EnsemblPlants:Solyc01g067010.2.1	TIGRFAMs:TIGR01640	UniParc:UPI0002762D4B
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:75348972..75350445

Molecular Weight (calculated)

41262.4 Da

IEP (calculated)

6.667

GRAVY (calculated)

-0.026

Length

371 amino acids

Sequence
(BLAST)

001: MKMKEIPTLP QDIIIEILIR LPLKTLLKFR SVSKSWLYLL SDAQFHKTHI SFSTNNPKFT DYTLAAIPTL SGLGKICHVY TISSENSSVI VSKHGCPSKT
101: LSLSAWILGS CNGLICLTSD SFNLMLLNPC TGKFSLFPDL MIEYEVGDGG VHIRYGFGYD ASTDDYKVVK MFSFPRIDNE GRHVNMVSVY SLKGSSWSSI
201: QGFDSGHVNG NVAVFANGVL HWEGCYDYVS GGVSSEIVTL DLAKERYGRI ALPRYEGGGI HWTLGESRGR LVACCNYESD KADMWVLKEY GVEKTWTKVV
301: TISSPDDRRV SISPLFVAEN GDEVLVKLGT EVTLYNSRNA SFKRIADYVS MDDFLQVQVT TYLESLASPH I

Best Arabidopsis Sequence Match ( AT4G12560.1 )
(BLAST)

001: MATIPMDIVN DIFLRLPAKT LVRCRALSKP CYHLINDPDF IESHLHRVLQ TGDHLMILLR GALRLYSVDL DSLDSVSDVE HPMKRGGPTE VFGSSNGLIG
101: LSNSPTDLAV FNPSTRQIHR LPPSSIDLPD GSSTRGYVFY GLGYDSVSDD YKVVRMVQFK IDSEDELGCS FPYEVKVFSL KKNSWKRIES VASSIQLLFY
201: FYYHLLYRRG YGVLAGNSLH WVLPRRPGLI AFNLIVRFDL ALEEFEIVRF PEAVANGNVD IQMDIGVLDG CLCLMCNYDQ SYVDVWMMKE YNVRDSWTKV
301: FTVQKPKSVK SFSYMRPLVY SKDKKKVLLE LNNTKLVWFD LESKKMSTLR IKDCPSSYSA ELVVSSLVLG CKGDLNNIKY RKEQQAKEAR EAKIMQNTKR
401: RDDFLSKGFK LVL

Arabidopsis Description

CPR1F-box protein CPR30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.