Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 73.42 | 66.28 |
| GSMUA_Achr11P... | Banana | nucleus | 54.02 | 53.18 |
| GSMUA_Achr1P00380_001 | Banana | nucleus | 48.56 | 50.75 |
| GSMUA_Achr5P12430_001 | Banana | nucleus | 49.57 | 47.07 |
| GSMUA_Achr2P03990_001 | Banana | nucleus | 45.55 | 45.09 |
| Solyc03g071680.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 27.44 | 44.42 |
| GSMUA_Achr8P11220_001 | Banana | nucleus | 47.7 | 44.09 |
| VIT_13s0019g05390.t01 | Wine grape | nucleus | 53.45 | 43.11 |
| PGSC0003DMT400070376 | Potato | nucleus | 52.16 | 42.01 |
| PGSC0003DMT400043571 | Potato | nucleus | 50.86 | 41.21 |
| KRH66429 | Soybean | nucleus | 11.93 | 38.97 |
| AT5G04460.1 | Thale cress | nucleus | 47.13 | 38.01 |
| Bra009452.1-P | Field mustard | nucleus | 45.69 | 37.99 |
| VIT_06s0061g00860.t01 | Wine grape | nucleus, plastid | 44.11 | 37.81 |
| Bra034121.1-P | Field mustard | nucleus | 41.52 | 36.12 |
| Bra029846.1-P | Field mustard | nucleus | 39.37 | 35.45 |
| CDX71406 | Canola | cytosol | 24.71 | 30.77 |
| Bra011990.1-P | Field mustard | nucleus, plastid | 32.61 | 29.71 |
| AT2G27950.2 | Thale cress | nucleus | 35.49 | 29.44 |
| PGSC0003DMT400018447 | Potato | nucleus | 31.75 | 28.96 |
| PGSC0003DMT400001109 | Potato | mitochondrion | 34.2 | 27.55 |
| GSMUA_Achr4P33210_001 | Banana | nucleus | 8.33 | 10.68 |
| GSMUA_Achr7P00390_001 | Banana | nucleus | 7.61 | 7.29 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P17370_001 | EnsemblPlants:GSMUA_Achr1T17370_001 | EnsemblPlantsGene:GSMUA_Achr1G17370_001 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF106 | PFAM:PF13920 |
| PFscan:PS50089 | SEG:seg | SUPFAM:SSF57850 | UniParc:UPI0002950516 | UniProt:M0S0P5 | MapMan:35.2 |
Description
protein binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G17370_001]
Coordinates
chr1:-:12930296..12936380
Molecular Weight (calculated)
80104.9 Da
IEP (calculated)
5.078
GRAVY (calculated)
-0.920
Length
696 amino acids
Sequence
(BLAST)
(BLAST)
001: MALAGLHTVS ALDSSFLRES GRSTSSSPVE RPAAARASAI LQMWRELEHE EDNQRSSREQ SPELGDNERG VRQIVRGWMT ESGVSDTESR ISPRNDTQRA
101: EWLGEIERER VRLVRQWVQM ASQQHRDARP QHVHRELLRL RGRQAHLELI MRMVTERQRE LQRLSQQHAV SEFAHHNRIQ SLLRGRFLRD RRPSEDDEER
201: PLSAAAREIV QLRQHRRVSG LRYVKKNAMA AFFKAQKYDV SRRGFLPCHI NQEYMLVEGF RFRLENIVRG QANNHNDFLA SQSMGNVGTD HSQEGIALEL
301: SNDDEDQNQS SIETISVHQV IETHATTELE SEITNNTIDV EESVTQVAGL QEEAAQERGD QEPSNDDAFS DWHAEAGEEF DRNWHENIVE DWPQETSENR
401: DGEDAHLPGL HEEWREDESH DTEETWHNEQ SDGLRDSRSR PGRRLDGFIL RDDGNVYSME LRELLSRRSV SNLLHSGFRE SLDRLVQSYV ERQGRTPDGW
501: DLQRPLPIPN PPEEDQDDEG DNLDEDIQDA VVRPQSAFPP PPLPPQQPIW HSGLHHNWAR QNMHRPETQW DAINDLRADM ARLQEGMNNM QRMLEACMDM
601: QLELQRSVRQ EVSAALNRAV GRQGVNEESS DDGSKWSQVR KGTCCICCDS HIDSLLYRCG HMCTCLKCAN ELVRSGGKCP LCRAPIIEAV RAYSVL
101: EWLGEIERER VRLVRQWVQM ASQQHRDARP QHVHRELLRL RGRQAHLELI MRMVTERQRE LQRLSQQHAV SEFAHHNRIQ SLLRGRFLRD RRPSEDDEER
201: PLSAAAREIV QLRQHRRVSG LRYVKKNAMA AFFKAQKYDV SRRGFLPCHI NQEYMLVEGF RFRLENIVRG QANNHNDFLA SQSMGNVGTD HSQEGIALEL
301: SNDDEDQNQS SIETISVHQV IETHATTELE SEITNNTIDV EESVTQVAGL QEEAAQERGD QEPSNDDAFS DWHAEAGEEF DRNWHENIVE DWPQETSENR
401: DGEDAHLPGL HEEWREDESH DTEETWHNEQ SDGLRDSRSR PGRRLDGFIL RDDGNVYSME LRELLSRRSV SNLLHSGFRE SLDRLVQSYV ERQGRTPDGW
501: DLQRPLPIPN PPEEDQDDEG DNLDEDIQDA VVRPQSAFPP PPLPPQQPIW HSGLHHNWAR QNMHRPETQW DAINDLRADM ARLQEGMNNM QRMLEACMDM
601: QLELQRSVRQ EVSAALNRAV GRQGVNEESS DDGSKWSQVR KGTCCICCDS HIDSLLYRCG HMCTCLKCAN ELVRSGGKCP LCRAPIIEAV RAYSVL
001: MTSIQPLLQK SESRDDVRAE FERGLEEFMR GHLDECISFG SCSSVHNPED EDNEDDQLVR RRRRSELEGD NLAESSAARR RQSQILSRWA ARQAQEMITT
101: IERRNRESEL IALAGLQTVS MLDSSFLRES QSQSPSSRRQ GAASERPNTQ ASGILQMWRE LEDEHVLNRA RERVRERLRQ QRSVESNTNL SSSIASESQL
201: SENNGSLRDS SESENDFGSW SHDRNEHGDN NNTSSREQSP DLGDGERERV RHIARGWMDS RINDHSSNVR QRDDNRRPEW LGDTERERVR IIREWMQMTS
301: QQRGGARATP REDQRSTSEA DRNHDAAPQV DRVRVGLAVN HEEGQPPHVR RDLRRVRGRQ ALLDLLMRAE RERQRELQGL LEHRAVSDFA HRNRIQSLLR
401: GRFLRNERPT VPERTPSMAS RELLQLRERQ TVSGLREGFH NGRENIVHEN TSNTDNDNSN TSTNALAIAI TAGNSQRVTD ESSTSSRQGN DSPILPDNSE
501: SNLANADRDW EEDTNQRRIW QENVPVDERP NLEQTTLTQF DGYDNTDINR DETSVSDMHR EASGFADDEY RTQEAHGVWH ENSSRQSDGN WPGTRSEALR
601: SRRVVQLRRL NRFHPPEDDN VYSMELRELL SRRSVSNLLH SGFRESLDQL IQSYAERRGH THVDWDLHAN LQTAIPDSPE RDTDHQVFVR NDNQLNGING
701: SQLLPTPPAP PPQPIWHQDL HHTSWSRHSM HRSEIEWEVM NDLRGDVARL QQGMSQMQRM LEACMDMQLE LQRSVRQEVS AALNRSAGDQ GMSAETSEDG
801: SRWSHVSKGT CCVCCDNHID ALLYRCGHMC TCSKCANELV RNGGKCPLCR APIIEVIRAY SIL
101: IERRNRESEL IALAGLQTVS MLDSSFLRES QSQSPSSRRQ GAASERPNTQ ASGILQMWRE LEDEHVLNRA RERVRERLRQ QRSVESNTNL SSSIASESQL
201: SENNGSLRDS SESENDFGSW SHDRNEHGDN NNTSSREQSP DLGDGERERV RHIARGWMDS RINDHSSNVR QRDDNRRPEW LGDTERERVR IIREWMQMTS
301: QQRGGARATP REDQRSTSEA DRNHDAAPQV DRVRVGLAVN HEEGQPPHVR RDLRRVRGRQ ALLDLLMRAE RERQRELQGL LEHRAVSDFA HRNRIQSLLR
401: GRFLRNERPT VPERTPSMAS RELLQLRERQ TVSGLREGFH NGRENIVHEN TSNTDNDNSN TSTNALAIAI TAGNSQRVTD ESSTSSRQGN DSPILPDNSE
501: SNLANADRDW EEDTNQRRIW QENVPVDERP NLEQTTLTQF DGYDNTDINR DETSVSDMHR EASGFADDEY RTQEAHGVWH ENSSRQSDGN WPGTRSEALR
601: SRRVVQLRRL NRFHPPEDDN VYSMELRELL SRRSVSNLLH SGFRESLDQL IQSYAERRGH THVDWDLHAN LQTAIPDSPE RDTDHQVFVR NDNQLNGING
701: SQLLPTPPAP PPQPIWHQDL HHTSWSRHSM HRSEIEWEVM NDLRGDVARL QQGMSQMQRM LEACMDMQLE LQRSVRQEVS AALNRSAGDQ GMSAETSEDG
801: SRWSHVSKGT CCVCCDNHID ALLYRCGHMC TCSKCANELV RNGGKCPLCR APIIEVIRAY SIL
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JWA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.