Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- vacuole 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 51.07 | 50.78 |
| GSMUA_Achr1P17370_001 | Banana | nucleus | 45.09 | 45.55 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.23 | 43.06 |
| GSMUA_Achr1P00380_001 | Banana | nucleus | 39.69 | 41.89 |
| Solyc03g071680.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 25.6 | 41.86 |
| GSMUA_Achr5P12430_001 | Banana | nucleus | 40.54 | 38.88 |
| GSMUA_Achr8P11220_001 | Banana | nucleus | 39.12 | 36.52 |
| VIT_13s0019g05390.t01 | Wine grape | nucleus | 42.67 | 34.76 |
| PGSC0003DMT400070376 | Potato | nucleus | 41.96 | 34.14 |
| PGSC0003DMT400043571 | Potato | nucleus | 40.26 | 32.95 |
| VIT_06s0061g00860.t01 | Wine grape | nucleus, plastid | 35.56 | 30.79 |
| Bra029846.1-P | Field mustard | nucleus | 33.29 | 30.27 |
| AT5G04460.1 | Thale cress | nucleus | 36.98 | 30.13 |
| KRH66429 | Soybean | nucleus | 9.1 | 30.05 |
| Bra034121.1-P | Field mustard | nucleus | 33.85 | 29.75 |
| Bra009452.1-P | Field mustard | nucleus | 35.42 | 29.75 |
| PGSC0003DMT400018447 | Potato | nucleus | 28.16 | 25.95 |
| CDX71406 | Canola | cytosol | 20.63 | 25.94 |
| AT2G27950.2 | Thale cress | nucleus | 29.16 | 24.43 |
| PGSC0003DMT400001109 | Potato | mitochondrion | 29.73 | 24.19 |
| Bra011990.1-P | Field mustard | nucleus, plastid | 25.18 | 23.17 |
| GSMUA_Achr4P33210_001 | Banana | nucleus | 8.11 | 10.5 |
| GSMUA_Achr7P00390_001 | Banana | nucleus | 8.82 | 8.53 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P03990_001 | EnsemblPlants:GSMUA_Achr2T03990_001 | EnsemblPlantsGene:GSMUA_Achr2G03990_001 | Gene3D:3.30.40.10 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil |
| PANTHER:PTHR10044 | PANTHER:PTHR10044:SF106 | PFAM:PF13920 | PFscan:PS50089 | SEG:seg | SUPFAM:SSF57850 |
| TMHMM:TMhelix | UniParc:UPI0002957361 | UniProt:M0S4Z0 | MapMan:35.2 | : | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G03990_001]
Coordinates
chr2:+:9520352..9525614
Molecular Weight (calculated)
80002.1 Da
IEP (calculated)
4.885
GRAVY (calculated)
-0.712
Length
703 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIAGLHLVS MLDPSFLRES GRSPMATSNV ERPVAARASS ILQMWRELED MTSAARTERR TTVAASADGS VSREREGVRD GSDTDHEYGQ AEHVRRALLR
101: PRGRQAGLER IMRRMAAERQ RELQILSEHR PVSEFAHRSR IQSLLRGRFL RNGEVVQDDQ ERPPSAAERE LGQLRQHRHV SALRSSSYGC FLDLIILTSL
201: SFFFLIIGIF CFCPHNFLLF LKKYCVQPYI IIDTVSVANA RQVLSQLSLR SSGVNPNHVY ICDGLHFQLE NIVWGQSTSQ PESSADQSIS AADQSQAGIV
301: TELPNYNHEE VLNRIQDSDV HQTTGREETP ESESGSHDDT LDMQEYAAAE VAGQQNEDAR HESRDQEPNT NGGFGDRQEE VREDFNGNWQ ENMDQDWPHE
401: TAGYDVGEES HLPRVNEEWH GDEPADTEET WQDEHTDPLI DQRSSSPPTS GNRFIPPDEE VYNVELRELL SRRSVSNLLR STFRETLEQQ LIESYIEQQG
501: RLSFDWDLYR PPVAPIREET QDQRQDDSDQ AIQDSTAGRS NVFQPPPLPP PPPPLWHSNL HHNTWVRQNM HCHSEIERDA INDLRAEMTS LQQGMSEMQR
601: MLESCMDMQI ELQRAVRQEV SAALNRSAGE GFIEQSSKDG YKWSQVRKGT CCVCCDNHID SLLYRCGHMC ACSKCAHELL GRGERCPLCR APIVEVVRAY
701: SIL
101: PRGRQAGLER IMRRMAAERQ RELQILSEHR PVSEFAHRSR IQSLLRGRFL RNGEVVQDDQ ERPPSAAERE LGQLRQHRHV SALRSSSYGC FLDLIILTSL
201: SFFFLIIGIF CFCPHNFLLF LKKYCVQPYI IIDTVSVANA RQVLSQLSLR SSGVNPNHVY ICDGLHFQLE NIVWGQSTSQ PESSADQSIS AADQSQAGIV
301: TELPNYNHEE VLNRIQDSDV HQTTGREETP ESESGSHDDT LDMQEYAAAE VAGQQNEDAR HESRDQEPNT NGGFGDRQEE VREDFNGNWQ ENMDQDWPHE
401: TAGYDVGEES HLPRVNEEWH GDEPADTEET WQDEHTDPLI DQRSSSPPTS GNRFIPPDEE VYNVELRELL SRRSVSNLLR STFRETLEQQ LIESYIEQQG
501: RLSFDWDLYR PPVAPIREET QDQRQDDSDQ AIQDSTAGRS NVFQPPPLPP PPPPLWHSNL HHNTWVRQNM HCHSEIERDA INDLRAEMTS LQQGMSEMQR
601: MLESCMDMQI ELQRAVRQEV SAALNRSAGE GFIEQSSKDG YKWSQVRKGT CCVCCDNHID SLLYRCGHMC ACSKCAHELL GRGERCPLCR APIVEVVRAY
701: SIL
001: MAIAGLQNIL VIDSSFRRDS EVQATRQREN EGRSSVRASS LLQMWRELED DHVMGHARER DGERRSVSSP SNTMRGNGCD SNISAHDIVR DSVNLGENEL
101: GGWSPTQSHV GSHNSSEDLG PFQSEHFSDL GMGERERVRQ IFREWTSSGT GQHTDSASQA TNSSRAEWLG ETEQERVRII REMVQMNSQQ RPALGDLREE
201: QPIEGANQIE RVLDGIVVNP NSIQNEHARR GIRKLCGRQV WVDMLKMAEM ERQRELEGLM QHHAVSNFAH RNRIQALLRG RFLRNGDNDD KEKPTSSAAT
301: ELGFLRERHT VSELREEFIS RLDRSASGQA SSSHSETSSN AETDHNRGEQ NDLNCLDSIN DADGGSDQNG READNQSSLD EITNSGRCCS RSTSLEERTA
401: RVEGWQRSEI DDFSQRRNDT EVDLNATGCS SSSIHGDEIR YGCQLRETIE IPYEQSLQIS EEIATMGPIN RTTNFQENLG ESINLTVTLE EQTVEQMENE
501: ESDWQLINGA TSAWRDDAEE EADTDVPENF PNQLSQLSSV DEDREANILG ELTEMQPDDD AASLQSTIQD WSEEHSDQDT VSMGRATTFF PPDDGNENNM
601: ELRELSSRRR VSNLLQSGFR ENLSQLIQSY MDRRSQNPVD WEEAETYSDH TIVGEDTEQQ DDAQSGGQEL DAVESPPLTL PSPVIPIQPR WDHDRSHSNW
701: PAHDLHQGIG MDWDSINDLR VDMGRIQQRM DNLQRMLEAC MEMQLELQRS IRQEVSAAMH RSTDQPGPSK DTASYESKWE YVRKGICCVC CESNIDSLLY
801: RCGHMNTCEK CAKKLVEAGG KCPMCQAPVI EVVRAYSIL
101: GGWSPTQSHV GSHNSSEDLG PFQSEHFSDL GMGERERVRQ IFREWTSSGT GQHTDSASQA TNSSRAEWLG ETEQERVRII REMVQMNSQQ RPALGDLREE
201: QPIEGANQIE RVLDGIVVNP NSIQNEHARR GIRKLCGRQV WVDMLKMAEM ERQRELEGLM QHHAVSNFAH RNRIQALLRG RFLRNGDNDD KEKPTSSAAT
301: ELGFLRERHT VSELREEFIS RLDRSASGQA SSSHSETSSN AETDHNRGEQ NDLNCLDSIN DADGGSDQNG READNQSSLD EITNSGRCCS RSTSLEERTA
401: RVEGWQRSEI DDFSQRRNDT EVDLNATGCS SSSIHGDEIR YGCQLRETIE IPYEQSLQIS EEIATMGPIN RTTNFQENLG ESINLTVTLE EQTVEQMENE
501: ESDWQLINGA TSAWRDDAEE EADTDVPENF PNQLSQLSSV DEDREANILG ELTEMQPDDD AASLQSTIQD WSEEHSDQDT VSMGRATTFF PPDDGNENNM
601: ELRELSSRRR VSNLLQSGFR ENLSQLIQSY MDRRSQNPVD WEEAETYSDH TIVGEDTEQQ DDAQSGGQEL DAVESPPLTL PSPVIPIQPR WDHDRSHSNW
701: PAHDLHQGIG MDWDSINDLR VDMGRIQQRM DNLQRMLEAC MEMQLELQRS IRQEVSAAMH RSTDQPGPSK DTASYESKWE YVRKGICCVC CESNIDSLLY
801: RCGHMNTCEK CAKKLVEAGG KCPMCQAPVI EVVRAYSIL
Arabidopsis Description
Ring/U-Box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IHN6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.