Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g007910.1.1 | Tomato | nucleus | 94.79 | 97.73 |
| PGSC0003DMT400043571 | Potato | nucleus | 73.84 | 74.27 |
| VIT_13s0019g05390.t01 | Wine grape | nucleus | 70.72 | 70.8 |
| KRG92104 | Soybean | nucleus | 67.13 | 68.4 |
| KRH34682 | Soybean | nucleus | 66.9 | 68.08 |
| AT5G04460.1 | Thale cress | nucleus | 61.46 | 61.53 |
| CDX70223 | Canola | cytosol | 51.62 | 57.55 |
| CDY44857 | Canola | nucleus | 51.16 | 56.89 |
| Bra009452.1-P | Field mustard | nucleus | 54.63 | 56.39 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.96 | 54.86 |
| Bra029846.1-P | Field mustard | nucleus | 48.38 | 54.08 |
| CDY41355 | Canola | nucleus | 46.64 | 53.52 |
| CDY08599 | Canola | nucleus | 44.68 | 53.39 |
| GSMUA_Achr11P... | Banana | nucleus | 42.94 | 52.48 |
| Bra034121.1-P | Field mustard | nucleus | 48.38 | 52.25 |
| GSMUA_Achr1P17370_001 | Banana | nucleus | 42.01 | 52.16 |
| CDY00948 | Canola | cytosol | 42.59 | 51.04 |
| GSMUA_Achr8P11220_001 | Banana | nucleus | 43.75 | 50.2 |
| GSMUA_Achr1P00380_001 | Banana | nucleus | 37.62 | 48.8 |
| Zm00001d019766_P001 | Maize | nucleus | 10.88 | 47.0 |
| Os09t0570500-01 | Rice | nucleus | 23.96 | 45.9 |
| GSMUA_Achr5P12430_001 | Banana | nucleus | 38.66 | 45.57 |
| Os02t0823300-01 | Rice | nucleus | 38.31 | 43.9 |
| KXG35138 | Sorghum | nucleus | 35.42 | 43.71 |
| EES06049 | Sorghum | nucleus | 38.31 | 43.38 |
| HORVU4Hr1G000090.6 | Barley | cytosol, mitochondrion, nucleus | 27.2 | 42.88 |
| Zm00001d019765_P001 | Maize | nucleus | 18.52 | 42.78 |
| TraesCS6A01G405400.1 | Wheat | nucleus | 37.62 | 42.43 |
| TraesCS6B01G449800.2 | Wheat | nucleus | 37.5 | 42.19 |
| GSMUA_Achr2P03990_001 | Banana | nucleus | 34.14 | 41.96 |
| TraesCS6D01G389100.1 | Wheat | nucleus | 37.04 | 41.78 |
| TraesCS4D01G003000.2 | Wheat | nucleus | 33.1 | 40.17 |
| OQU93435 | Sorghum | nucleus | 29.63 | 39.2 |
| Zm00001d027308_P001 | Maize | nucleus | 30.21 | 39.01 |
| Zm00001d051871_P002 | Maize | nucleus | 37.73 | 38.81 |
| TraesCS4B01G003100.1 | Wheat | nucleus | 31.37 | 38.12 |
| TraesCS4A01G311200.1 | Wheat | nucleus | 31.25 | 37.76 |
| HORVU4Hr1G086680.2 | Barley | mitochondrion | 18.87 | 37.47 |
| HORVU6Hr1G092920.1 | Barley | cytosol | 27.78 | 37.38 |
| TraesCS5A01G529500.1 | Wheat | plastid | 30.32 | 36.49 |
| TraesCS4D01G354300.1 | Wheat | plastid | 29.51 | 35.97 |
| PGSC0003DMT400018447 | Potato | nucleus | 30.9 | 34.99 |
| PGSC0003DMT400001109 | Potato | mitochondrion | 32.06 | 32.06 |
| PGSC0003DMT400029374 | Potato | nucleus, plastid | 9.14 | 8.01 |
| PGSC0003DMT400035458 | Potato | nucleus | 8.68 | 7.25 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400070376 | EnsemblPlantsGene:PGSC0003DMG400027362 | EntrezGene:102590154 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF106 | PFAM:PF13920 |
| PFscan:PS50089 | PGSC:PGSC0003DMG400027362 | SEG:seg | SUPFAM:SSF57850 | UniParc:UPI00029540B4 | UniProt:M1CM30 |
| MapMan:35.2 | : | : | : | : | : |
Description
Glu-rich protein [Source:PGSC_GENE;Acc:PGSC0003DMG400027362]
Coordinates
chr11:+:4243443..4250329
Molecular Weight (calculated)
98910.3 Da
IEP (calculated)
5.525
GRAVY (calculated)
-1.072
Length
864 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDVQQQMQQ KPESTGDDVR SEFERGLEEL VCGHLDECMS YASCSSVRNT EDEDEESDQL VRRRRRSDLE GDDLAESSAA RRRHSRILSR WAARQAQEMI
101: TTIERRNRES ELMALAGLHT VSMLDSSFLR ESQSPTSRRQ GGDSERISTR ASNILQMWRE LEDEHVLNRA RERVRERLTQ RRSMDSNTNV SSANMSESRE
201: TDNQGSLVDA SESENEYGTW SHDPIGPQND HRDRDNSSRE PSPDLGEVER ERVRQIVRGW MESGISDHSS NVSQPQRNGG PRGEWLGETE RERVRIVREW
301: VQMTSQQRGA RGSQREEQST RLSSQGDRAR EGSVVDHEEA QPEHIRRDML RLRGRQALLD LLMRIERERQ RELQGLLEHR AVSDFAHRNR IQSLLRGRFL
401: HERPAEEERP PSIAASELVQ LRQRNTVSGL REGFRSRLEN IVRGQVSSNS ENSSNSRNSD SRNNQTHAHP SQEIENENGE LMQTGELEST VHQLPDRGEN
501: SGQSMNQQPP PNQGRDRVEA VVEAEEGIQR NLTSNDSNVW TDETTENVSR NWQENPSTAR SLETTAYVGR AEHRFPENQE VWHEDASREA VESWSAGPSD
601: PPRMRRPVPL RRVSRFHPPD DDNVYSMELR ELLSRRSVSN LLRSGFRESL DQLIQSYVER QGRSPIDWDL HRNLPIPASP EMGPDQQNDE QNDDQQDGVG
701: RPSIVLPSPP VPPPQPLWHQ DLHHSSWPRH AVHRSELEWE MINELRSDMA RLQQGMNHMQ RMLESCMDMQ LELQRSVRQE VSAALNRSAG GQGAAETSVD
801: GSKWGNVKKG TCCVCCDSHI DSLLYRCGHM CTCSKCANEL VRGGGKCPLC RAPIVEVIRA YSIL
101: TTIERRNRES ELMALAGLHT VSMLDSSFLR ESQSPTSRRQ GGDSERISTR ASNILQMWRE LEDEHVLNRA RERVRERLTQ RRSMDSNTNV SSANMSESRE
201: TDNQGSLVDA SESENEYGTW SHDPIGPQND HRDRDNSSRE PSPDLGEVER ERVRQIVRGW MESGISDHSS NVSQPQRNGG PRGEWLGETE RERVRIVREW
301: VQMTSQQRGA RGSQREEQST RLSSQGDRAR EGSVVDHEEA QPEHIRRDML RLRGRQALLD LLMRIERERQ RELQGLLEHR AVSDFAHRNR IQSLLRGRFL
401: HERPAEEERP PSIAASELVQ LRQRNTVSGL REGFRSRLEN IVRGQVSSNS ENSSNSRNSD SRNNQTHAHP SQEIENENGE LMQTGELEST VHQLPDRGEN
501: SGQSMNQQPP PNQGRDRVEA VVEAEEGIQR NLTSNDSNVW TDETTENVSR NWQENPSTAR SLETTAYVGR AEHRFPENQE VWHEDASREA VESWSAGPSD
601: PPRMRRPVPL RRVSRFHPPD DDNVYSMELR ELLSRRSVSN LLRSGFRESL DQLIQSYVER QGRSPIDWDL HRNLPIPASP EMGPDQQNDE QNDDQQDGVG
701: RPSIVLPSPP VPPPQPLWHQ DLHHSSWPRH AVHRSELEWE MINELRSDMA RLQQGMNHMQ RMLESCMDMQ LELQRSVRQE VSAALNRSAG GQGAAETSVD
801: GSKWGNVKKG TCCVCCDSHI DSLLYRCGHM CTCSKCANEL VRGGGKCPLC RAPIVEVIRA YSIL
001: MTSIQPLLQK SESRDDVRAE FERGLEEFMR GHLDECISFG SCSSVHNPED EDNEDDQLVR RRRRSELEGD NLAESSAARR RQSQILSRWA ARQAQEMITT
101: IERRNRESEL IALAGLQTVS MLDSSFLRES QSQSPSSRRQ GAASERPNTQ ASGILQMWRE LEDEHVLNRA RERVRERLRQ QRSVESNTNL SSSIASESQL
201: SENNGSLRDS SESENDFGSW SHDRNEHGDN NNTSSREQSP DLGDGERERV RHIARGWMDS RINDHSSNVR QRDDNRRPEW LGDTERERVR IIREWMQMTS
301: QQRGGARATP REDQRSTSEA DRNHDAAPQV DRVRVGLAVN HEEGQPPHVR RDLRRVRGRQ ALLDLLMRAE RERQRELQGL LEHRAVSDFA HRNRIQSLLR
401: GRFLRNERPT VPERTPSMAS RELLQLRERQ TVSGLREGFH NGRENIVHEN TSNTDNDNSN TSTNALAIAI TAGNSQRVTD ESSTSSRQGN DSPILPDNSE
501: SNLANADRDW EEDTNQRRIW QENVPVDERP NLEQTTLTQF DGYDNTDINR DETSVSDMHR EASGFADDEY RTQEAHGVWH ENSSRQSDGN WPGTRSEALR
601: SRRVVQLRRL NRFHPPEDDN VYSMELRELL SRRSVSNLLH SGFRESLDQL IQSYAERRGH THVDWDLHAN LQTAIPDSPE RDTDHQVFVR NDNQLNGING
701: SQLLPTPPAP PPQPIWHQDL HHTSWSRHSM HRSEIEWEVM NDLRGDVARL QQGMSQMQRM LEACMDMQLE LQRSVRQEVS AALNRSAGDQ GMSAETSEDG
801: SRWSHVSKGT CCVCCDNHID ALLYRCGHMC TCSKCANELV RNGGKCPLCR APIIEVIRAY SIL
101: IERRNRESEL IALAGLQTVS MLDSSFLRES QSQSPSSRRQ GAASERPNTQ ASGILQMWRE LEDEHVLNRA RERVRERLRQ QRSVESNTNL SSSIASESQL
201: SENNGSLRDS SESENDFGSW SHDRNEHGDN NNTSSREQSP DLGDGERERV RHIARGWMDS RINDHSSNVR QRDDNRRPEW LGDTERERVR IIREWMQMTS
301: QQRGGARATP REDQRSTSEA DRNHDAAPQV DRVRVGLAVN HEEGQPPHVR RDLRRVRGRQ ALLDLLMRAE RERQRELQGL LEHRAVSDFA HRNRIQSLLR
401: GRFLRNERPT VPERTPSMAS RELLQLRERQ TVSGLREGFH NGRENIVHEN TSNTDNDNSN TSTNALAIAI TAGNSQRVTD ESSTSSRQGN DSPILPDNSE
501: SNLANADRDW EEDTNQRRIW QENVPVDERP NLEQTTLTQF DGYDNTDINR DETSVSDMHR EASGFADDEY RTQEAHGVWH ENSSRQSDGN WPGTRSEALR
601: SRRVVQLRRL NRFHPPEDDN VYSMELRELL SRRSVSNLLH SGFRESLDQL IQSYAERRGH THVDWDLHAN LQTAIPDSPE RDTDHQVFVR NDNQLNGING
701: SQLLPTPPAP PPQPIWHQDL HHTSWSRHSM HRSEIEWEVM NDLRGDVARL QQGMSQMQRM LEACMDMQLE LQRSVRQEVS AALNRSAGDQ GMSAETSEDG
801: SRWSHVSKGT CCVCCDNHID ALLYRCGHMC TCSKCANELV RNGGKCPLCR APIIEVIRAY SIL
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JWA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.