Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019766_P001 | Maize | nucleus | 26.43 | 92.5 |
| TraesCS4D01G003000.2 | Wheat | nucleus | 56.71 | 55.76 |
| HORVU4Hr1G000090.6 | Barley | cytosol, mitochondrion, nucleus | 41.57 | 53.1 |
| TraesCS4A01G311200.1 | Wheat | nucleus | 48.71 | 47.69 |
| TraesCS4B01G003100.1 | Wheat | nucleus | 48.29 | 47.54 |
| KRH66429 | Soybean | nucleus | 12.71 | 41.78 |
| Solyc03g071680.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 25.57 | 41.63 |
| GSMUA_Achr1P00380_001 | Banana | nucleus | 38.71 | 40.69 |
| EES06049 | Sorghum | nucleus | 44.14 | 40.5 |
| GSMUA_Achr5P12430_001 | Banana | nucleus | 39.57 | 37.79 |
| GSMUA_Achr8P11220_001 | Banana | nucleus | 40.14 | 37.32 |
| VIT_13s0019g05390.t01 | Wine grape | nucleus | 44.86 | 36.38 |
| PGSC0003DMT400070376 | Potato | nucleus | 43.71 | 35.42 |
| OQU93435 | Sorghum | nucleus | 32.0 | 34.3 |
| PGSC0003DMT400043571 | Potato | nucleus | 41.43 | 33.76 |
| Bra009452.1-P | Field mustard | nucleus | 40.0 | 33.45 |
| VIT_06s0061g00860.t01 | Wine grape | nucleus, plastid | 38.29 | 33.0 |
| AT5G04460.1 | Thale cress | nucleus | 40.0 | 32.45 |
| Bra029846.1-P | Field mustard | nucleus | 35.43 | 32.08 |
| Bra034121.1-P | Field mustard | nucleus | 36.29 | 31.75 |
| CDX71406 | Canola | cytosol | 24.71 | 30.95 |
| AT2G27950.2 | Thale cress | nucleus | 33.0 | 27.53 |
| Bra011990.1-P | Field mustard | nucleus, plastid | 29.86 | 27.36 |
| PGSC0003DMT400018447 | Potato | nucleus | 29.57 | 27.13 |
| PGSC0003DMT400001109 | Potato | mitochondrion | 31.57 | 25.58 |
| EER99396 | Sorghum | plastid | 9.14 | 8.29 |
Protein Annotations
| EnsemblPlants:KXG35138 | EnsemblPlantsGene:SORBI_3002G137400 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF106 | PFAM:PF13920 | PFscan:PS50089 |
| ProteinID:KXG35138 | ProteinID:KXG35138.1 | SEG:seg | SUPFAM:SSF57850 | UniParc:UPI0003C65DA2 | UniProt:A0A1B6QB33 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:20976862..20981654
Molecular Weight (calculated)
79926.8 Da
IEP (calculated)
4.727
GRAVY (calculated)
-0.974
Length
700 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDVPVPAPA PPVPDIDMTP SRRREPSEPR SDSDWDAGSS REGSPDLLRR APAVQISRAS SSSSSWLREI ERDRVRLVRE WVHMAARDRD DDAGPPPSPV
101: PEHARRDAPR IRGRQARLEL VMRMAADRQA ELHRLSQHRA VSDFPHRNRI HALLRGRFLR NGGLPEERRP PSVAARELGQ LRQRHPVSGL REEFRFRLEN
201: LVRGQADSQV EASSARDVEL STNDRSELRP SETTQERHEW TSENISLQQI DSTATTSGFE SGSPSIAEVF CGSHSQAESQ EDLEHDRRDW QQFSQAVIGE
301: ESERSWHDNA DISSREGTAV EEDNNEHLPE ANEESTSVDH LPEGLEESIS NGSLPEAQED HHDSDHLPAV LEELHDSNHF QESHGEWSRD DRPIEVYDEW
401: QSDDHLPEVN EEWHNDDESN DTADNWHDNN SDQPIDHDAA LIRRANTFIP GDDDNVYSTE LRELLSRRSV SNLLHSAFRE NLDRLIRSYV ERQGRGPLPW
501: DLEGTTPAPP SPDQNQEQQR DDEDQELQNT VNRPPLVIPP PPMPPRQPLW HSELHRNNWI RQNIHRSSSD IEWEAINDLR ADMARLQQGM SHMQRMLEAC
601: MDMQLELQRS VRQEVSAALN RFIGEQGGES REIIDDGSKW INVRKGTCCI CCETPIDSLL YRCGHMCTCS KCANELVRGG GKCPLCRAPI IEVIRAYFIM
101: PEHARRDAPR IRGRQARLEL VMRMAADRQA ELHRLSQHRA VSDFPHRNRI HALLRGRFLR NGGLPEERRP PSVAARELGQ LRQRHPVSGL REEFRFRLEN
201: LVRGQADSQV EASSARDVEL STNDRSELRP SETTQERHEW TSENISLQQI DSTATTSGFE SGSPSIAEVF CGSHSQAESQ EDLEHDRRDW QQFSQAVIGE
301: ESERSWHDNA DISSREGTAV EEDNNEHLPE ANEESTSVDH LPEGLEESIS NGSLPEAQED HHDSDHLPAV LEELHDSNHF QESHGEWSRD DRPIEVYDEW
401: QSDDHLPEVN EEWHNDDESN DTADNWHDNN SDQPIDHDAA LIRRANTFIP GDDDNVYSTE LRELLSRRSV SNLLHSAFRE NLDRLIRSYV ERQGRGPLPW
501: DLEGTTPAPP SPDQNQEQQR DDEDQELQNT VNRPPLVIPP PPMPPRQPLW HSELHRNNWI RQNIHRSSSD IEWEAINDLR ADMARLQQGM SHMQRMLEAC
601: MDMQLELQRS VRQEVSAALN RFIGEQGGES REIIDDGSKW INVRKGTCCI CCETPIDSLL YRCGHMCTCS KCANELVRGG GKCPLCRAPI IEVIRAYFIM
001: MTSIQPLLQK SESRDDVRAE FERGLEEFMR GHLDECISFG SCSSVHNPED EDNEDDQLVR RRRRSELEGD NLAESSAARR RQSQILSRWA ARQAQEMITT
101: IERRNRESEL IALAGLQTVS MLDSSFLRES QSQSPSSRRQ GAASERPNTQ ASGILQMWRE LEDEHVLNRA RERVRERLRQ QRSVESNTNL SSSIASESQL
201: SENNGSLRDS SESENDFGSW SHDRNEHGDN NNTSSREQSP DLGDGERERV RHIARGWMDS RINDHSSNVR QRDDNRRPEW LGDTERERVR IIREWMQMTS
301: QQRGGARATP REDQRSTSEA DRNHDAAPQV DRVRVGLAVN HEEGQPPHVR RDLRRVRGRQ ALLDLLMRAE RERQRELQGL LEHRAVSDFA HRNRIQSLLR
401: GRFLRNERPT VPERTPSMAS RELLQLRERQ TVSGLREGFH NGRENIVHEN TSNTDNDNSN TSTNALAIAI TAGNSQRVTD ESSTSSRQGN DSPILPDNSE
501: SNLANADRDW EEDTNQRRIW QENVPVDERP NLEQTTLTQF DGYDNTDINR DETSVSDMHR EASGFADDEY RTQEAHGVWH ENSSRQSDGN WPGTRSEALR
601: SRRVVQLRRL NRFHPPEDDN VYSMELRELL SRRSVSNLLH SGFRESLDQL IQSYAERRGH THVDWDLHAN LQTAIPDSPE RDTDHQVFVR NDNQLNGING
701: SQLLPTPPAP PPQPIWHQDL HHTSWSRHSM HRSEIEWEVM NDLRGDVARL QQGMSQMQRM LEACMDMQLE LQRSVRQEVS AALNRSAGDQ GMSAETSEDG
801: SRWSHVSKGT CCVCCDNHID ALLYRCGHMC TCSKCANELV RNGGKCPLCR APIIEVIRAY SIL
101: IERRNRESEL IALAGLQTVS MLDSSFLRES QSQSPSSRRQ GAASERPNTQ ASGILQMWRE LEDEHVLNRA RERVRERLRQ QRSVESNTNL SSSIASESQL
201: SENNGSLRDS SESENDFGSW SHDRNEHGDN NNTSSREQSP DLGDGERERV RHIARGWMDS RINDHSSNVR QRDDNRRPEW LGDTERERVR IIREWMQMTS
301: QQRGGARATP REDQRSTSEA DRNHDAAPQV DRVRVGLAVN HEEGQPPHVR RDLRRVRGRQ ALLDLLMRAE RERQRELQGL LEHRAVSDFA HRNRIQSLLR
401: GRFLRNERPT VPERTPSMAS RELLQLRERQ TVSGLREGFH NGRENIVHEN TSNTDNDNSN TSTNALAIAI TAGNSQRVTD ESSTSSRQGN DSPILPDNSE
501: SNLANADRDW EEDTNQRRIW QENVPVDERP NLEQTTLTQF DGYDNTDINR DETSVSDMHR EASGFADDEY RTQEAHGVWH ENSSRQSDGN WPGTRSEALR
601: SRRVVQLRRL NRFHPPEDDN VYSMELRELL SRRSVSNLLH SGFRESLDQL IQSYAERRGH THVDWDLHAN LQTAIPDSPE RDTDHQVFVR NDNQLNGING
701: SQLLPTPPAP PPQPIWHQDL HHTSWSRHSM HRSEIEWEVM NDLRGDVARL QQGMSQMQRM LEACMDMQLE LQRSVRQEVS AALNRSAGDQ GMSAETSEDG
801: SRWSHVSKGT CCVCCDNHID ALLYRCGHMC TCSKCANELV RNGGKCPLCR APIIEVIRAY SIL
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JWA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.