Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g071670.1.1 | Tomato | nucleus | 40.75 | 78.3 |
| PGSC0003DMT400070376 | Potato | nucleus | 74.27 | 73.84 |
| VIT_13s0019g05390.t01 | Wine grape | nucleus | 67.64 | 67.32 |
| KRG92104 | Soybean | nucleus | 64.73 | 65.57 |
| KRH34682 | Soybean | nucleus | 64.26 | 65.02 |
| AT5G04460.1 | Thale cress | nucleus | 57.86 | 57.59 |
| CDX70223 | Canola | cytosol | 50.41 | 55.87 |
| CDY44857 | Canola | nucleus | 49.59 | 54.83 |
| Bra009452.1-P | Field mustard | nucleus | 52.97 | 54.36 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.61 | 53.05 |
| CDY08599 | Canola | nucleus | 43.19 | 51.31 |
| CDY41355 | Canola | nucleus | 44.82 | 51.13 |
| Bra029846.1-P | Field mustard | nucleus | 45.98 | 51.1 |
| GSMUA_Achr1P17370_001 | Banana | nucleus | 41.21 | 50.86 |
| GSMUA_Achr11P... | Banana | nucleus | 41.56 | 50.49 |
| Bra034121.1-P | Field mustard | nucleus | 46.33 | 49.75 |
| CDY00948 | Canola | cytosol | 41.09 | 48.96 |
| GSMUA_Achr8P11220_001 | Banana | nucleus | 42.03 | 47.94 |
| Zm00001d019766_P001 | Maize | nucleus | 10.94 | 47.0 |
| GSMUA_Achr1P00380_001 | Banana | nucleus | 36.32 | 46.85 |
| GSMUA_Achr5P12430_001 | Banana | nucleus | 37.37 | 43.79 |
| Os09t0570500-01 | Rice | nucleus | 22.82 | 43.46 |
| Os02t0823300-01 | Rice | nucleus | 37.14 | 42.31 |
| HORVU4Hr1G000090.6 | Barley | cytosol, mitochondrion, nucleus | 26.78 | 41.97 |
| KXG35138 | Sorghum | nucleus | 33.76 | 41.43 |
| Zm00001d019765_P001 | Maize | nucleus | 17.93 | 41.18 |
| EES06049 | Sorghum | nucleus | 36.44 | 41.02 |
| TraesCS6B01G449800.2 | Wheat | nucleus | 36.67 | 41.02 |
| TraesCS6A01G405400.1 | Wheat | nucleus | 36.44 | 40.86 |
| TraesCS6D01G389100.1 | Wheat | nucleus | 36.2 | 40.6 |
| GSMUA_Achr2P03990_001 | Banana | nucleus | 32.95 | 40.26 |
| TraesCS4D01G003000.2 | Wheat | nucleus | 32.71 | 39.47 |
| Zm00001d027308_P001 | Maize | nucleus | 29.34 | 37.67 |
| TraesCS4B01G003100.1 | Wheat | nucleus | 31.08 | 37.55 |
| TraesCS4A01G311200.1 | Wheat | nucleus | 30.97 | 37.2 |
| Zm00001d051871_P002 | Maize | nucleus | 35.97 | 36.79 |
| OQU93435 | Sorghum | nucleus | 27.71 | 36.45 |
| HORVU6Hr1G092920.1 | Barley | cytosol | 26.19 | 35.05 |
| TraesCS5A01G529500.1 | Wheat | plastid | 29.22 | 34.96 |
| HORVU4Hr1G086680.2 | Barley | mitochondrion | 17.58 | 34.71 |
| TraesCS4D01G354300.1 | Wheat | plastid | 28.17 | 34.13 |
| PGSC0003DMT400018447 | Potato | nucleus | 30.27 | 34.08 |
| PGSC0003DMT400001109 | Potato | mitochondrion | 30.73 | 30.56 |
| PGSC0003DMT400029374 | Potato | nucleus, plastid | 8.73 | 7.61 |
| PGSC0003DMT400035458 | Potato | nucleus | 7.92 | 6.57 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400043571 | EnsemblPlantsGene:PGSC0003DMG400016919 | EntrezGene:102600663 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF106 | PFAM:PF13920 | PFscan:PS50089 |
| PGSC:PGSC0003DMG400016919 | RefSeq:XP_006364444.1 | SEG:seg | SUPFAM:SSF57850 | UniParc:UPI0002965C05 | UniProt:M1BEW0 |
| MapMan:35.2 | : | : | : | : | : |
Description
Glu-rich protein [Source:PGSC_GENE;Acc:PGSC0003DMG400016919]
Coordinates
chr3:+:16911557..16918307
Molecular Weight (calculated)
98312.7 Da
IEP (calculated)
6.043
GRAVY (calculated)
-1.019
Length
859 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHVLQQKPD STGDDAHSEF ERGWEELMCG HLDECMSFAS SSSARNTEDE DDDSDGLVRR RRRRTTSLIE GDDNLAESSA ARRRRSRILS RWAARQAEHM
101: ITTIERRNRE SELMALAGLH TVSTLDSSFL RESQSPTSRR DAERTSSRSS TILQMWRELE DEHILNHARE RVRERLTHQR TVDSNTNISS TSISESRETE
201: NHDTLVDANE SENEYGTWSH DVIGPQIENS ENGNFSREQS PDLGEVERER VRQIVRGWME SGISDHSPNV SQRNGVPRSE WLGETERERV RIVREWVQMT
301: SQQRGPRGGR REEQSNGLSV QADRVRDESV VEHEEGQPEH VHRDMLRLRG RQALLDLLVR SEGERQRELQ RLLEHRAVSD FAHRSRIQSL LRGRFLRNEG
401: PAEEERPPSM AASELVHLRQ RHTVSGLRQG FRSRLENIVR GQVSSHSESS SNSGNGGLRS NQAHANPLQE VQNENLEQLQ SREQERITHQ LPDHRESFDS
501: STTSQATNWL VSPNQGRGQV EPIVEADGAN QRDATSNEQS HGTMENTSGN WPQNQPIVWP PDTTGDMNRD ERRLPENIEV WHEDGSQEAV ENRSEGPSDP
601: PRMRRPVPYR RISRFHPPDD DNVYSMELRE LLSRRSVSNL LHSDFRESLD HLIQSYVERQ GRAPIDWDLH RNLPIPTSTE RDPDNQNVAQ PEGISRPSHG
701: QPSPPVPPPQ PLWHQDLHQS SWPRLTVHRS ELEWEMMNDL RTDMAKLQQG VNHMQKMLEA CMDMQLELQR SVRQEVSAAL NRSADGQGVA ETSADGSKWG
801: HVKKGTCCVC CDIHIDALLY RCGHMCTCYK CANELVRGGG KCPLCRAPIV EVIRAYSIL
101: ITTIERRNRE SELMALAGLH TVSTLDSSFL RESQSPTSRR DAERTSSRSS TILQMWRELE DEHILNHARE RVRERLTHQR TVDSNTNISS TSISESRETE
201: NHDTLVDANE SENEYGTWSH DVIGPQIENS ENGNFSREQS PDLGEVERER VRQIVRGWME SGISDHSPNV SQRNGVPRSE WLGETERERV RIVREWVQMT
301: SQQRGPRGGR REEQSNGLSV QADRVRDESV VEHEEGQPEH VHRDMLRLRG RQALLDLLVR SEGERQRELQ RLLEHRAVSD FAHRSRIQSL LRGRFLRNEG
401: PAEEERPPSM AASELVHLRQ RHTVSGLRQG FRSRLENIVR GQVSSHSESS SNSGNGGLRS NQAHANPLQE VQNENLEQLQ SREQERITHQ LPDHRESFDS
501: STTSQATNWL VSPNQGRGQV EPIVEADGAN QRDATSNEQS HGTMENTSGN WPQNQPIVWP PDTTGDMNRD ERRLPENIEV WHEDGSQEAV ENRSEGPSDP
601: PRMRRPVPYR RISRFHPPDD DNVYSMELRE LLSRRSVSNL LHSDFRESLD HLIQSYVERQ GRAPIDWDLH RNLPIPTSTE RDPDNQNVAQ PEGISRPSHG
701: QPSPPVPPPQ PLWHQDLHQS SWPRLTVHRS ELEWEMMNDL RTDMAKLQQG VNHMQKMLEA CMDMQLELQR SVRQEVSAAL NRSADGQGVA ETSADGSKWG
801: HVKKGTCCVC CDIHIDALLY RCGHMCTCYK CANELVRGGG KCPLCRAPIV EVIRAYSIL
001: MTSIQPLLQK SESRDDVRAE FERGLEEFMR GHLDECISFG SCSSVHNPED EDNEDDQLVR RRRRSELEGD NLAESSAARR RQSQILSRWA ARQAQEMITT
101: IERRNRESEL IALAGLQTVS MLDSSFLRES QSQSPSSRRQ GAASERPNTQ ASGILQMWRE LEDEHVLNRA RERVRERLRQ QRSVESNTNL SSSIASESQL
201: SENNGSLRDS SESENDFGSW SHDRNEHGDN NNTSSREQSP DLGDGERERV RHIARGWMDS RINDHSSNVR QRDDNRRPEW LGDTERERVR IIREWMQMTS
301: QQRGGARATP REDQRSTSEA DRNHDAAPQV DRVRVGLAVN HEEGQPPHVR RDLRRVRGRQ ALLDLLMRAE RERQRELQGL LEHRAVSDFA HRNRIQSLLR
401: GRFLRNERPT VPERTPSMAS RELLQLRERQ TVSGLREGFH NGRENIVHEN TSNTDNDNSN TSTNALAIAI TAGNSQRVTD ESSTSSRQGN DSPILPDNSE
501: SNLANADRDW EEDTNQRRIW QENVPVDERP NLEQTTLTQF DGYDNTDINR DETSVSDMHR EASGFADDEY RTQEAHGVWH ENSSRQSDGN WPGTRSEALR
601: SRRVVQLRRL NRFHPPEDDN VYSMELRELL SRRSVSNLLH SGFRESLDQL IQSYAERRGH THVDWDLHAN LQTAIPDSPE RDTDHQVFVR NDNQLNGING
701: SQLLPTPPAP PPQPIWHQDL HHTSWSRHSM HRSEIEWEVM NDLRGDVARL QQGMSQMQRM LEACMDMQLE LQRSVRQEVS AALNRSAGDQ GMSAETSEDG
801: SRWSHVSKGT CCVCCDNHID ALLYRCGHMC TCSKCANELV RNGGKCPLCR APIIEVIRAY SIL
101: IERRNRESEL IALAGLQTVS MLDSSFLRES QSQSPSSRRQ GAASERPNTQ ASGILQMWRE LEDEHVLNRA RERVRERLRQ QRSVESNTNL SSSIASESQL
201: SENNGSLRDS SESENDFGSW SHDRNEHGDN NNTSSREQSP DLGDGERERV RHIARGWMDS RINDHSSNVR QRDDNRRPEW LGDTERERVR IIREWMQMTS
301: QQRGGARATP REDQRSTSEA DRNHDAAPQV DRVRVGLAVN HEEGQPPHVR RDLRRVRGRQ ALLDLLMRAE RERQRELQGL LEHRAVSDFA HRNRIQSLLR
401: GRFLRNERPT VPERTPSMAS RELLQLRERQ TVSGLREGFH NGRENIVHEN TSNTDNDNSN TSTNALAIAI TAGNSQRVTD ESSTSSRQGN DSPILPDNSE
501: SNLANADRDW EEDTNQRRIW QENVPVDERP NLEQTTLTQF DGYDNTDINR DETSVSDMHR EASGFADDEY RTQEAHGVWH ENSSRQSDGN WPGTRSEALR
601: SRRVVQLRRL NRFHPPEDDN VYSMELRELL SRRSVSNLLH SGFRESLDQL IQSYAERRGH THVDWDLHAN LQTAIPDSPE RDTDHQVFVR NDNQLNGING
701: SQLLPTPPAP PPQPIWHQDL HHTSWSRHSM HRSEIEWEVM NDLRGDVARL QQGMSQMQRM LEACMDMQLE LQRSVRQEVS AALNRSAGDQ GMSAETSEDG
801: SRWSHVSKGT CCVCCDNHID ALLYRCGHMC TCSKCANELV RNGGKCPLCR APIIEVIRAY SIL
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JWA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.