Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G529500.1 | Wheat | plastid | 79.83 | 78.83 |
| HORVU4Hr1G086680.2 | Barley | mitochondrion | 44.15 | 71.95 |
| OQU93435 | Sorghum | nucleus | 37.09 | 40.28 |
| Zm00001d027308_P001 | Maize | nucleus | 37.52 | 39.76 |
| GSMUA_Achr1P00380_001 | Banana | nucleus | 32.02 | 34.08 |
| GSMUA_Achr8P11220_001 | Banana | nucleus | 34.27 | 32.27 |
| GSMUA_Achr5P12430_001 | Banana | nucleus | 31.88 | 30.83 |
| TraesCS6D01G389100.1 | Wheat | nucleus | 32.44 | 30.03 |
| Solyc03g071680.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 17.91 | 29.53 |
| PGSC0003DMT400070376 | Potato | nucleus | 35.97 | 29.51 |
| VIT_13s0019g05390.t01 | Wine grape | nucleus | 35.12 | 28.85 |
| Bra034121.1-P | Field mustard | nucleus | 32.02 | 28.38 |
| Bra009452.1-P | Field mustard | nucleus | 33.43 | 28.32 |
| PGSC0003DMT400043571 | Potato | nucleus | 34.13 | 28.17 |
| AT5G04460.1 | Thale cress | nucleus | 33.85 | 27.81 |
| Bra029846.1-P | Field mustard | nucleus | 30.04 | 27.55 |
| TraesCS4D01G003000.2 | Wheat | nucleus | 27.5 | 27.39 |
| VIT_06s0061g00860.t01 | Wine grape | nucleus, plastid | 29.34 | 25.62 |
| CDX71406 | Canola | cytosol | 19.61 | 24.87 |
| KRH66429 | Soybean | nucleus | 7.33 | 24.41 |
| PGSC0003DMT400018447 | Potato | nucleus | 24.4 | 22.67 |
| Bra011990.1-P | Field mustard | nucleus, plastid | 24.26 | 22.51 |
| AT2G27950.2 | Thale cress | nucleus | 26.38 | 22.29 |
| PGSC0003DMT400001109 | Potato | mitochondrion | 24.26 | 19.91 |
| TraesCS2D01G233500.1 | Wheat | cytosol, plastid | 8.32 | 7.79 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G354300.1 | EnsemblPlantsGene:TraesCS4D01G354300 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF106 | PFAM:PF13920 | PFscan:PS50089 | SEG:seg |
| SUPFAM:SSF57850 | TIGR:cd16647 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr4D:-:504197679..504200945
Molecular Weight (calculated)
77569.9 Da
IEP (calculated)
6.919
GRAVY (calculated)
-0.758
Length
709 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNSLGPHHS SSSSSSSSTS RSGQRPASGF ARLLWTNSSS SSSARAPVEK CRLRLPACCS TYTCHSPSRL ARTMSASAME DLRAKSMACA GVGGGEASSS
101: AAASAAASRI IAQWAARRRQ ACEQMVLGGL DRRDRDSELM ALARLHAVST MLDASSFLRA RADANDDDDD DGRRARSPER ALVRRIAREW TAPAPAQPQG
201: SPRGGNDGGV GEEWLGETER ERVRSVRERV RRASQGGDGG DGHAPGLRWR QARAPTAARR MSMERLRELQ GLSEHRAVSS FAHRGRIQSI LRGRIIGGGR
301: PTRDDVTIST AAGESGQITQ SRPGSGAENI TSDQATHLEN ASANHEIIQT LQPAQDQPDN VPNTSDALQD GQLDQAQDMH GYQEYSSDSG SSAQSGEHSG
401: SSSDGNGSAR QEAIAYVQPP PSVQWPGETS GSGASGQEAE EEEEEWHVID NPEAEAQQWR PEDLGGFARH NRLQEDALYG MYRAELRELL SRRSVSNLLS
501: SGFRESLDQL VHSYAQRQEH DPPAPLNQDH VQHQRIGGSD RAEHAAAGAQ PAAGQRQQRR WRMVPPRRDW NRQPVHRPDE LEVDEAIHDL RDDMAVLQRG
601: MASTQQMLQA CMEMQVELQR SIRQEVASAM HRSLSLHGTV RWYDDGSQWE LVRKGTCCIC CDSQIDSLLY RCGHMCTCSK CARELLRGAG KCPLCRAPIV
701: EVVRAYSII
101: AAASAAASRI IAQWAARRRQ ACEQMVLGGL DRRDRDSELM ALARLHAVST MLDASSFLRA RADANDDDDD DGRRARSPER ALVRRIAREW TAPAPAQPQG
201: SPRGGNDGGV GEEWLGETER ERVRSVRERV RRASQGGDGG DGHAPGLRWR QARAPTAARR MSMERLRELQ GLSEHRAVSS FAHRGRIQSI LRGRIIGGGR
301: PTRDDVTIST AAGESGQITQ SRPGSGAENI TSDQATHLEN ASANHEIIQT LQPAQDQPDN VPNTSDALQD GQLDQAQDMH GYQEYSSDSG SSAQSGEHSG
401: SSSDGNGSAR QEAIAYVQPP PSVQWPGETS GSGASGQEAE EEEEEWHVID NPEAEAQQWR PEDLGGFARH NRLQEDALYG MYRAELRELL SRRSVSNLLS
501: SGFRESLDQL VHSYAQRQEH DPPAPLNQDH VQHQRIGGSD RAEHAAAGAQ PAAGQRQQRR WRMVPPRRDW NRQPVHRPDE LEVDEAIHDL RDDMAVLQRG
601: MASTQQMLQA CMEMQVELQR SIRQEVASAM HRSLSLHGTV RWYDDGSQWE LVRKGTCCIC CDSQIDSLLY RCGHMCTCSK CARELLRGAG KCPLCRAPIV
701: EVVRAYSII
001: MAIAGLQNIL VIDSSFRRDS EVQATRQREN EGRSSVRASS LLQMWRELED DHVMGHARER DGERRSVSSP SNTMRGNGCD SNISAHDIVR DSVNLGENEL
101: GGWSPTQSHV GSHNSSEDLG PFQSEHFSDL GMGERERVRQ IFREWTSSGT GQHTDSASQA TNSSRAEWLG ETEQERVRII REMVQMNSQQ RPALGDLREE
201: QPIEGANQIE RVLDGIVVNP NSIQNEHARR GIRKLCGRQV WVDMLKMAEM ERQRELEGLM QHHAVSNFAH RNRIQALLRG RFLRNGDNDD KEKPTSSAAT
301: ELGFLRERHT VSELREEFIS RLDRSASGQA SSSHSETSSN AETDHNRGEQ NDLNCLDSIN DADGGSDQNG READNQSSLD EITNSGRCCS RSTSLEERTA
401: RVEGWQRSEI DDFSQRRNDT EVDLNATGCS SSSIHGDEIR YGCQLRETIE IPYEQSLQIS EEIATMGPIN RTTNFQENLG ESINLTVTLE EQTVEQMENE
501: ESDWQLINGA TSAWRDDAEE EADTDVPENF PNQLSQLSSV DEDREANILG ELTEMQPDDD AASLQSTIQD WSEEHSDQDT VSMGRATTFF PPDDGNENNM
601: ELRELSSRRR VSNLLQSGFR ENLSQLIQSY MDRRSQNPVD WEEAETYSDH TIVGEDTEQQ DDAQSGGQEL DAVESPPLTL PSPVIPIQPR WDHDRSHSNW
701: PAHDLHQGIG MDWDSINDLR VDMGRIQQRM DNLQRMLEAC MEMQLELQRS IRQEVSAAMH RSTDQPGPSK DTASYESKWE YVRKGICCVC CESNIDSLLY
801: RCGHMNTCEK CAKKLVEAGG KCPMCQAPVI EVVRAYSIL
101: GGWSPTQSHV GSHNSSEDLG PFQSEHFSDL GMGERERVRQ IFREWTSSGT GQHTDSASQA TNSSRAEWLG ETEQERVRII REMVQMNSQQ RPALGDLREE
201: QPIEGANQIE RVLDGIVVNP NSIQNEHARR GIRKLCGRQV WVDMLKMAEM ERQRELEGLM QHHAVSNFAH RNRIQALLRG RFLRNGDNDD KEKPTSSAAT
301: ELGFLRERHT VSELREEFIS RLDRSASGQA SSSHSETSSN AETDHNRGEQ NDLNCLDSIN DADGGSDQNG READNQSSLD EITNSGRCCS RSTSLEERTA
401: RVEGWQRSEI DDFSQRRNDT EVDLNATGCS SSSIHGDEIR YGCQLRETIE IPYEQSLQIS EEIATMGPIN RTTNFQENLG ESINLTVTLE EQTVEQMENE
501: ESDWQLINGA TSAWRDDAEE EADTDVPENF PNQLSQLSSV DEDREANILG ELTEMQPDDD AASLQSTIQD WSEEHSDQDT VSMGRATTFF PPDDGNENNM
601: ELRELSSRRR VSNLLQSGFR ENLSQLIQSY MDRRSQNPVD WEEAETYSDH TIVGEDTEQQ DDAQSGGQEL DAVESPPLTL PSPVIPIQPR WDHDRSHSNW
701: PAHDLHQGIG MDWDSINDLR VDMGRIQQRM DNLQRMLEAC MEMQLELQRS IRQEVSAAMH RSTDQPGPSK DTASYESKWE YVRKGICCVC CESNIDSLLY
801: RCGHMNTCEK CAKKLVEAGG KCPMCQAPVI EVVRAYSIL
Arabidopsis Description
Ring/U-Box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IHN6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.