Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G354300.1 | Wheat | plastid | 78.83 | 79.83 |
| HORVU4Hr1G086680.2 | Barley | mitochondrion | 41.5 | 68.51 |
| Zm00001d027308_P001 | Maize | nucleus | 37.88 | 40.66 |
| OQU93435 | Sorghum | nucleus | 36.63 | 40.28 |
| GSMUA_Achr1P00380_001 | Banana | nucleus | 30.36 | 32.73 |
| GSMUA_Achr8P11220_001 | Banana | nucleus | 33.7 | 32.14 |
| GSMUA_Achr5P12430_001 | Banana | nucleus | 31.48 | 30.83 |
| PGSC0003DMT400070376 | Potato | nucleus | 36.49 | 30.32 |
| Solyc03g071680.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 18.11 | 30.23 |
| TraesCS6A01G405400.1 | Wheat | nucleus | 32.17 | 30.16 |
| PGSC0003DMT400043571 | Potato | nucleus | 34.96 | 29.22 |
| VIT_13s0019g05390.t01 | Wine grape | nucleus | 34.82 | 28.97 |
| Bra034121.1-P | Field mustard | nucleus | 32.17 | 28.88 |
| Bra009452.1-P | Field mustard | nucleus | 33.57 | 28.79 |
| TraesCS4A01G311200.1 | Wheat | nucleus | 27.58 | 27.69 |
| AT5G04460.1 | Thale cress | nucleus | 33.01 | 27.46 |
| Bra029846.1-P | Field mustard | nucleus | 28.83 | 26.78 |
| VIT_06s0061g00860.t01 | Wine grape | nucleus, plastid | 28.55 | 25.25 |
| KRH66429 | Soybean | nucleus | 7.38 | 24.88 |
| CDX71406 | Canola | cytosol | 18.52 | 23.79 |
| PGSC0003DMT400018447 | Potato | nucleus | 23.96 | 22.54 |
| Bra011990.1-P | Field mustard | nucleus, plastid | 23.96 | 22.51 |
| AT2G27950.2 | Thale cress | nucleus | 26.18 | 22.41 |
| PGSC0003DMT400001109 | Potato | mitochondrion | 24.51 | 20.37 |
| TraesCS2A01G229600.2 | Wheat | nucleus, plastid | 8.36 | 8.12 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G529500.1 | EnsemblPlantsGene:TraesCS5A01G529500 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF106 | PFAM:PF13920 | PFscan:PS50089 | SEG:seg |
| SUPFAM:SSF57850 | TIGR:cd16647 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr5A:-:688859894..688863043
Molecular Weight (calculated)
78232.5 Da
IEP (calculated)
6.626
GRAVY (calculated)
-0.770
Length
718 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNPLGPHHS SSSSSSSSST SRSGQRPASG FARLLWTNSS SSSSSARAPV EKCRLRLPAC CSTYTHHSPS RLARSMSASA MEDLRPKSMA CAGVGGDTSS
101: SSSSSASAAA SRIIAQWAAR RRQACEQMVL GGLDRRDRDS ELMALARLHA VSTMLDASSF LRARADATDD DDDGRRARSP ERALVRRIAR EWTASAPAQQ
201: PQGAPRGGDG VGVGGGEEWL GETERERVRT VRERVRRASQ GGDGVDGRAP GLRGRQARAP SAARRMSMER LRELQGLSEH RAVSSFAHRG RIQSILRGRI
301: SRGGRPAQDG GPISTAAAGE AGQVTQSHPA SGAENIASDQ VVRDHVHDME NASASHEIQT LQSSTQDQSA NVPNTRDALE NGQLDQEQGM HGYQEYSSDS
401: GTSEQSGEQS GSSSSDGNGS ARQEAIAYVQ PPPSVQWPGE TSGSGASGQE AEEEEEEEEE EEWHVIDNPE AAEAQQWRPE DIGGFARHNR LQEDALYGMY
501: RAELRELLSR RSVSNLLSSG FRESLDQLVH SYAQRQEHDP PAPLNNGPDR AGDAAAAAQP PAGQRQQRRW RMVPPRRDWS RQPVHRPDEL EVDEAIHDLR
601: DDMAVLQRGM ASTQQMLQAC MEMQVELQRS IRQEVASAMH RSLSVHGTVR WYDDGSQWEL VRKGTCCICC DSQIDSLLYR CGHMCTCSKC ARELLRGAGK
701: CPLCRAPIVE VVRAYSII
101: SSSSSASAAA SRIIAQWAAR RRQACEQMVL GGLDRRDRDS ELMALARLHA VSTMLDASSF LRARADATDD DDDGRRARSP ERALVRRIAR EWTASAPAQQ
201: PQGAPRGGDG VGVGGGEEWL GETERERVRT VRERVRRASQ GGDGVDGRAP GLRGRQARAP SAARRMSMER LRELQGLSEH RAVSSFAHRG RIQSILRGRI
301: SRGGRPAQDG GPISTAAAGE AGQVTQSHPA SGAENIASDQ VVRDHVHDME NASASHEIQT LQSSTQDQSA NVPNTRDALE NGQLDQEQGM HGYQEYSSDS
401: GTSEQSGEQS GSSSSDGNGS ARQEAIAYVQ PPPSVQWPGE TSGSGASGQE AEEEEEEEEE EEWHVIDNPE AAEAQQWRPE DIGGFARHNR LQEDALYGMY
501: RAELRELLSR RSVSNLLSSG FRESLDQLVH SYAQRQEHDP PAPLNNGPDR AGDAAAAAQP PAGQRQQRRW RMVPPRRDWS RQPVHRPDEL EVDEAIHDLR
601: DDMAVLQRGM ASTQQMLQAC MEMQVELQRS IRQEVASAMH RSLSVHGTVR WYDDGSQWEL VRKGTCCICC DSQIDSLLYR CGHMCTCSKC ARELLRGAGK
701: CPLCRAPIVE VVRAYSII
001: MTSIQPLLQK SESRDDVRAE FERGLEEFMR GHLDECISFG SCSSVHNPED EDNEDDQLVR RRRRSELEGD NLAESSAARR RQSQILSRWA ARQAQEMITT
101: IERRNRESEL IALAGLQTVS MLDSSFLRES QSQSPSSRRQ GAASERPNTQ ASGILQMWRE LEDEHVLNRA RERVRERLRQ QRSVESNTNL SSSIASESQL
201: SENNGSLRDS SESENDFGSW SHDRNEHGDN NNTSSREQSP DLGDGERERV RHIARGWMDS RINDHSSNVR QRDDNRRPEW LGDTERERVR IIREWMQMTS
301: QQRGGARATP REDQRSTSEA DRNHDAAPQV DRVRVGLAVN HEEGQPPHVR RDLRRVRGRQ ALLDLLMRAE RERQRELQGL LEHRAVSDFA HRNRIQSLLR
401: GRFLRNERPT VPERTPSMAS RELLQLRERQ TVSGLREGFH NGRENIVHEN TSNTDNDNSN TSTNALAIAI TAGNSQRVTD ESSTSSRQGN DSPILPDNSE
501: SNLANADRDW EEDTNQRRIW QENVPVDERP NLEQTTLTQF DGYDNTDINR DETSVSDMHR EASGFADDEY RTQEAHGVWH ENSSRQSDGN WPGTRSEALR
601: SRRVVQLRRL NRFHPPEDDN VYSMELRELL SRRSVSNLLH SGFRESLDQL IQSYAERRGH THVDWDLHAN LQTAIPDSPE RDTDHQVFVR NDNQLNGING
701: SQLLPTPPAP PPQPIWHQDL HHTSWSRHSM HRSEIEWEVM NDLRGDVARL QQGMSQMQRM LEACMDMQLE LQRSVRQEVS AALNRSAGDQ GMSAETSEDG
801: SRWSHVSKGT CCVCCDNHID ALLYRCGHMC TCSKCANELV RNGGKCPLCR APIIEVIRAY SIL
101: IERRNRESEL IALAGLQTVS MLDSSFLRES QSQSPSSRRQ GAASERPNTQ ASGILQMWRE LEDEHVLNRA RERVRERLRQ QRSVESNTNL SSSIASESQL
201: SENNGSLRDS SESENDFGSW SHDRNEHGDN NNTSSREQSP DLGDGERERV RHIARGWMDS RINDHSSNVR QRDDNRRPEW LGDTERERVR IIREWMQMTS
301: QQRGGARATP REDQRSTSEA DRNHDAAPQV DRVRVGLAVN HEEGQPPHVR RDLRRVRGRQ ALLDLLMRAE RERQRELQGL LEHRAVSDFA HRNRIQSLLR
401: GRFLRNERPT VPERTPSMAS RELLQLRERQ TVSGLREGFH NGRENIVHEN TSNTDNDNSN TSTNALAIAI TAGNSQRVTD ESSTSSRQGN DSPILPDNSE
501: SNLANADRDW EEDTNQRRIW QENVPVDERP NLEQTTLTQF DGYDNTDINR DETSVSDMHR EASGFADDEY RTQEAHGVWH ENSSRQSDGN WPGTRSEALR
601: SRRVVQLRRL NRFHPPEDDN VYSMELRELL SRRSVSNLLH SGFRESLDQL IQSYAERRGH THVDWDLHAN LQTAIPDSPE RDTDHQVFVR NDNQLNGING
701: SQLLPTPPAP PPQPIWHQDL HHTSWSRHSM HRSEIEWEVM NDLRGDVARL QQGMSQMQRM LEACMDMQLE LQRSVRQEVS AALNRSAGDQ GMSAETSEDG
801: SRWSHVSKGT CCVCCDNHID ALLYRCGHMC TCSKCANELV RNGGKCPLCR APIIEVIRAY SIL
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JWA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.