Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P17370_001 | Banana | nucleus | 66.28 | 73.42 |
| GSMUA_Achr11P... | Banana | nucleus | 55.12 | 60.11 |
| GSMUA_Achr1P00380_001 | Banana | nucleus | 44.49 | 51.5 |
| VIT_13s0019g05390.t01 | Wine grape | nucleus | 55.38 | 49.48 |
| PGSC0003DMT400070376 | Potato | nucleus | 54.86 | 48.96 |
| GSMUA_Achr8P11220_001 | Banana | nucleus | 47.6 | 48.74 |
| PGSC0003DMT400043571 | Potato | nucleus | 53.05 | 47.61 |
| GSMUA_Achr2P03990_001 | Banana | nucleus | 43.06 | 47.23 |
| Solyc03g071680.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 26.33 | 47.21 |
| GSMUA_Achr5P12430_001 | Banana | nucleus | 44.75 | 47.07 |
| AT5G04460.1 | Thale cress | nucleus | 51.36 | 45.89 |
| Bra009452.1-P | Field mustard | nucleus | 47.99 | 44.21 |
| Bra029846.1-P | Field mustard | nucleus | 43.58 | 43.47 |
| Bra034121.1-P | Field mustard | nucleus | 44.62 | 43.0 |
| KRH66429 | Soybean | nucleus | 11.67 | 42.25 |
| VIT_06s0061g00860.t01 | Wine grape | nucleus, plastid | 41.76 | 39.66 |
| PGSC0003DMT400018447 | Potato | nucleus | 31.0 | 31.32 |
| CDX71406 | Canola | cytosol | 22.7 | 31.31 |
| AT2G27950.2 | Thale cress | nucleus | 32.94 | 30.27 |
| PGSC0003DMT400001109 | Potato | mitochondrion | 33.59 | 29.98 |
| Bra011990.1-P | Field mustard | nucleus, plastid | 29.7 | 29.97 |
| GSMUA_Achr4P33210_001 | Banana | nucleus | 7.39 | 10.5 |
| GSMUA_Achr7P00390_001 | Banana | nucleus | 8.82 | 9.35 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP07540_001 | EnsemblPlants:GSMUA_AchrUn_randomT07540_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG07540_001 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF106 | PFAM:PF13920 |
| PFscan:PS50089 | SEG:seg | SUPFAM:SSF57850 | UniParc:UPI0002965D2A | UniProt:M0U765 | MapMan:35.2 |
Description
protein binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG07540_001]
Coordinates
chrchrUn_random:+:32412471..32419789
Molecular Weight (calculated)
89011.0 Da
IEP (calculated)
4.952
GRAVY (calculated)
-0.913
Length
771 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAAALASSS SSFCVGDDDD QLARRRRRSV LDGDELAESS AAARRHSRIL SRWAARQAEE MITTIERRNR ETELMALAGL HTVSMLDSSF LREPGRSPSS
101: SPVERPAAAR ASSILQMWRE LEHEEDDQRS SREQSPELGD GERERVRQIV RGWMTESGMS DTESRISPRN DTQRAEWLGE IERERVRLVR EWRNHDGSVT
201: DHEDGQPEHV QRELLRLRGR QARLELIMRM MTERQRELQS LSEHHAVSEF AHRSRIQSLL RGRFLRNERP SEDDEERQPS VAAREIGQLR QRHRVSGLRY
301: VTKVWILHVL RFCYVQLICV INWDVRLASW QVEGFRFRLE NIVRVQANSH NDALASQNFA TARTDHSQEG TTLELPNDNQ DQNQSRTEDI NSHQLIQTHA
401: TTELETSRTG NTINMEESGT QLAGLQEEAA QETRDSEAST EVGFSEWHAD AGEEFDGNRQ ENVVQDWSHD TSENRDEEDS HLPEVHEEWH EDESHDTEET
501: WHDEQSDDLR DPRSSPTRRV SRFIPPDDEN VYSMELRELL SRRSVSNLLH SGFRESLDQL IQSYIERQGR APVDWDLQRS LPSPNSPEDE VNQDDDLNQE
601: IQDVVDRPQS VFPPPPLPPR QPIWRTGLHH NNWSRQNMHR SEIEWDAISD LRADMARLQQ GMSNMQRMLE ACMDMQLELQ RSVRQEVSAA LNRAVGRQGV
701: CEESSDDGSK WSQVRKGTCC ICCDSQIDSL LYRCGHMCTC WKCANELIRS GGKCPLCRAP IVEVVRAYSI L
101: SPVERPAAAR ASSILQMWRE LEHEEDDQRS SREQSPELGD GERERVRQIV RGWMTESGMS DTESRISPRN DTQRAEWLGE IERERVRLVR EWRNHDGSVT
201: DHEDGQPEHV QRELLRLRGR QARLELIMRM MTERQRELQS LSEHHAVSEF AHRSRIQSLL RGRFLRNERP SEDDEERQPS VAAREIGQLR QRHRVSGLRY
301: VTKVWILHVL RFCYVQLICV INWDVRLASW QVEGFRFRLE NIVRVQANSH NDALASQNFA TARTDHSQEG TTLELPNDNQ DQNQSRTEDI NSHQLIQTHA
401: TTELETSRTG NTINMEESGT QLAGLQEEAA QETRDSEAST EVGFSEWHAD AGEEFDGNRQ ENVVQDWSHD TSENRDEEDS HLPEVHEEWH EDESHDTEET
501: WHDEQSDDLR DPRSSPTRRV SRFIPPDDEN VYSMELRELL SRRSVSNLLH SGFRESLDQL IQSYIERQGR APVDWDLQRS LPSPNSPEDE VNQDDDLNQE
601: IQDVVDRPQS VFPPPPLPPR QPIWRTGLHH NNWSRQNMHR SEIEWDAISD LRADMARLQQ GMSNMQRMLE ACMDMQLELQ RSVRQEVSAA LNRAVGRQGV
701: CEESSDDGSK WSQVRKGTCC ICCDSQIDSL LYRCGHMCTC WKCANELIRS GGKCPLCRAP IVEVVRAYSI L
001: MTSIQPLLQK SESRDDVRAE FERGLEEFMR GHLDECISFG SCSSVHNPED EDNEDDQLVR RRRRSELEGD NLAESSAARR RQSQILSRWA ARQAQEMITT
101: IERRNRESEL IALAGLQTVS MLDSSFLRES QSQSPSSRRQ GAASERPNTQ ASGILQMWRE LEDEHVLNRA RERVRERLRQ QRSVESNTNL SSSIASESQL
201: SENNGSLRDS SESENDFGSW SHDRNEHGDN NNTSSREQSP DLGDGERERV RHIARGWMDS RINDHSSNVR QRDDNRRPEW LGDTERERVR IIREWMQMTS
301: QQRGGARATP REDQRSTSEA DRNHDAAPQV DRVRVGLAVN HEEGQPPHVR RDLRRVRGRQ ALLDLLMRAE RERQRELQGL LEHRAVSDFA HRNRIQSLLR
401: GRFLRNERPT VPERTPSMAS RELLQLRERQ TVSGLREGFH NGRENIVHEN TSNTDNDNSN TSTNALAIAI TAGNSQRVTD ESSTSSRQGN DSPILPDNSE
501: SNLANADRDW EEDTNQRRIW QENVPVDERP NLEQTTLTQF DGYDNTDINR DETSVSDMHR EASGFADDEY RTQEAHGVWH ENSSRQSDGN WPGTRSEALR
601: SRRVVQLRRL NRFHPPEDDN VYSMELRELL SRRSVSNLLH SGFRESLDQL IQSYAERRGH THVDWDLHAN LQTAIPDSPE RDTDHQVFVR NDNQLNGING
701: SQLLPTPPAP PPQPIWHQDL HHTSWSRHSM HRSEIEWEVM NDLRGDVARL QQGMSQMQRM LEACMDMQLE LQRSVRQEVS AALNRSAGDQ GMSAETSEDG
801: SRWSHVSKGT CCVCCDNHID ALLYRCGHMC TCSKCANELV RNGGKCPLCR APIIEVIRAY SIL
101: IERRNRESEL IALAGLQTVS MLDSSFLRES QSQSPSSRRQ GAASERPNTQ ASGILQMWRE LEDEHVLNRA RERVRERLRQ QRSVESNTNL SSSIASESQL
201: SENNGSLRDS SESENDFGSW SHDRNEHGDN NNTSSREQSP DLGDGERERV RHIARGWMDS RINDHSSNVR QRDDNRRPEW LGDTERERVR IIREWMQMTS
301: QQRGGARATP REDQRSTSEA DRNHDAAPQV DRVRVGLAVN HEEGQPPHVR RDLRRVRGRQ ALLDLLMRAE RERQRELQGL LEHRAVSDFA HRNRIQSLLR
401: GRFLRNERPT VPERTPSMAS RELLQLRERQ TVSGLREGFH NGRENIVHEN TSNTDNDNSN TSTNALAIAI TAGNSQRVTD ESSTSSRQGN DSPILPDNSE
501: SNLANADRDW EEDTNQRRIW QENVPVDERP NLEQTTLTQF DGYDNTDINR DETSVSDMHR EASGFADDEY RTQEAHGVWH ENSSRQSDGN WPGTRSEALR
601: SRRVVQLRRL NRFHPPEDDN VYSMELRELL SRRSVSNLLH SGFRESLDQL IQSYAERRGH THVDWDLHAN LQTAIPDSPE RDTDHQVFVR NDNQLNGING
701: SQLLPTPPAP PPQPIWHQDL HHTSWSRHSM HRSEIEWEVM NDLRGDVARL QQGMSQMQRM LEACMDMQLE LQRSVRQEVS AALNRSAGDQ GMSAETSEDG
801: SRWSHVSKGT CCVCCDNHID ALLYRCGHMC TCSKCANELV RNGGKCPLCR APIIEVIRAY SIL
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JWA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.