Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G036300.1 | Wheat | nucleus | 79.49 | 88.57 |
| TraesCS2D01G594800.1 | Wheat | nucleus | 79.49 | 88.39 |
| TraesCS2B01G601400.1 | Wheat | nucleus | 79.3 | 88.0 |
| HORVU2Hr1G122920.2 | Barley | nucleus | 65.85 | 69.17 |
| Os04t0682400-01 | Rice | nucleus | 53.15 | 56.05 |
| KXG27463 | Sorghum | nucleus | 51.18 | 50.56 |
| HORVU4Hr1G033990.7 | Barley | golgi, nucleus | 9.69 | 23.46 |
| HORVU2Hr1G031260.2 | Barley | nucleus, plastid | 10.82 | 23.14 |
| HORVU7Hr1G052090.3 | Barley | nucleus | 10.54 | 22.67 |
| HORVU2Hr1G078910.4 | Barley | mitochondrion, nucleus | 7.71 | 19.2 |
| HORVU5Hr1G069180.3 | Barley | nucleus, peroxisome, plastid | 7.81 | 19.17 |
| HORVU1Hr1G038240.1 | Barley | nucleus | 6.59 | 19.02 |
| HORVU4Hr1G075700.5 | Barley | nucleus | 7.34 | 18.75 |
| HORVU2Hr1G106810.1 | Barley | nucleus | 8.09 | 18.61 |
| HORVU6Hr1G048390.1 | Barley | cytoskeleton, nucleus, peroxisome | 7.24 | 18.47 |
| HORVU2Hr1G064650.4 | Barley | nucleus | 5.83 | 18.18 |
| HORVU7Hr1G066510.3 | Barley | plastid | 7.06 | 17.16 |
| HORVU2Hr1G087390.3 | Barley | cytosol, mitochondrion, nucleus | 9.5 | 16.53 |
| HORVU4Hr1G059070.1 | Barley | cytosol | 9.31 | 15.14 |
| HORVU5Hr1G050560.1 | Barley | plastid | 9.88 | 14.96 |
| HORVU7Hr1G063970.1 | Barley | cytosol, nucleus, plastid | 10.07 | 14.94 |
| HORVU2Hr1G046380.2 | Barley | nucleus | 4.89 | 11.79 |
| Bra039841.1-P | Field mustard | cytosol | 1.22 | 6.1 |
| CDY37229 | Canola | cytosol | 1.22 | 6.1 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G123110.1 | EnsemblPlantsGene:HORVU2Hr1G123110 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| PANTHER:PTHR24012 | PANTHER:PTHR24012:SF491 | PFAM:PF00076 | PFscan:PS50102 | SEG:seg | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI000B481B2E | UniProt:A0A287JRD7 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr2H:-:754712647..754717489
Molecular Weight (calculated)
115567.0 Da
IEP (calculated)
5.479
GRAVY (calculated)
-0.460
Length
1063 amino acids
Sequence
(BLAST)
(BLAST)
0001: SHAAPQPTTV TPPPPPPPSA ASLRPSIHPT SHHTLRLRGR IADGNPPLPR PRRQAPSPSP AAEKVAGTRM GCKSDLTDQL QKDGMSVVTA DYEEGSEEEE
0101: PFEREFYDDD DDDYEEGSEE EEPFEREFYD DEDGDDDDCE PKTQAVDSSE VSLADVSEEE PCDVAAPLED EDASYEEPFV SELCYEEEDS CEQDSYYAGP
0201: HTDSYRKKLY EVEPCDDQVA HEYEFVKKKS STVQTINKEQ NKKVVLKRAL RKGSSNELKA VPVIDDMETK PSKKRLSVRF ATDVSCYTYS TESFGAAKLE
0301: KRKAQFDDQD SHLRKRQEHI VSSLKDGGKL KEVDETNLYV GNLPASVSSH KLIELFLPFG RIVRSKVADD RITGISQGYG FVKYASARSA AAATERMNGR
0401: LIDGKALEVR VAGPPTSVSN PCKQSVSETC SLPSKEIDAS NLYVSNLPLS MDTLKLLDHF LPFGKVTYIK VPRDHTTGLS KGYGHVKYAD SRHAAQAIIH
0501: LNGLLVEGKR IEVRLSDISP TLSNSAVGSH TNSRTIKEID MANLYVCNIP ASINTNKLID LFLPFGKITQ ARVAADQEGA HSAKGYGFVK FADSQCAAEA
0601: IALMNGALVE GETLNVRVAG LSSSASSSAV QGSSIKSPEI NKSRLYITNL PQTMNDNKLI ELFLPFGQIS KVVINPEYSL VYYADVASAM TAAERMDGYL
0701: IGGKRLVVRG SEYCQPNAAE QALSQPAGKP TKEIDMANVY VGSIPPTVTC DQLVELFRPF GQIVQSRLFH GYGMVRYNHP SSATAAIDHM DGYQIGGSSL
0801: VVRVAGLPNP GDYLTVRAPV SGNEQRQIDM TNLYVCHLPL HVTAEKLIEI FLPCGQITQA KVVVDWHTGG SRGFGFVKFG DAYGAAVALT HMNGCPLEGH
0901: ILGVRIAGVH PSDMDSYMTR LYSQFTLPDP SMMAVGIPTS SYWPYYCAES AYVEGQGADT ASQTSQEESV SASSFAEKGS SSVSSHVTDS SQQHSSAGWA
1001: GPPGFNPHTI SSQPPSTGRA GPPSFNPHAT AKKDSATARK PSQPCSKVHL AQSGGSQKRR SIV
0101: PFEREFYDDD DDDYEEGSEE EEPFEREFYD DEDGDDDDCE PKTQAVDSSE VSLADVSEEE PCDVAAPLED EDASYEEPFV SELCYEEEDS CEQDSYYAGP
0201: HTDSYRKKLY EVEPCDDQVA HEYEFVKKKS STVQTINKEQ NKKVVLKRAL RKGSSNELKA VPVIDDMETK PSKKRLSVRF ATDVSCYTYS TESFGAAKLE
0301: KRKAQFDDQD SHLRKRQEHI VSSLKDGGKL KEVDETNLYV GNLPASVSSH KLIELFLPFG RIVRSKVADD RITGISQGYG FVKYASARSA AAATERMNGR
0401: LIDGKALEVR VAGPPTSVSN PCKQSVSETC SLPSKEIDAS NLYVSNLPLS MDTLKLLDHF LPFGKVTYIK VPRDHTTGLS KGYGHVKYAD SRHAAQAIIH
0501: LNGLLVEGKR IEVRLSDISP TLSNSAVGSH TNSRTIKEID MANLYVCNIP ASINTNKLID LFLPFGKITQ ARVAADQEGA HSAKGYGFVK FADSQCAAEA
0601: IALMNGALVE GETLNVRVAG LSSSASSSAV QGSSIKSPEI NKSRLYITNL PQTMNDNKLI ELFLPFGQIS KVVINPEYSL VYYADVASAM TAAERMDGYL
0701: IGGKRLVVRG SEYCQPNAAE QALSQPAGKP TKEIDMANVY VGSIPPTVTC DQLVELFRPF GQIVQSRLFH GYGMVRYNHP SSATAAIDHM DGYQIGGSSL
0801: VVRVAGLPNP GDYLTVRAPV SGNEQRQIDM TNLYVCHLPL HVTAEKLIEI FLPCGQITQA KVVVDWHTGG SRGFGFVKFG DAYGAAVALT HMNGCPLEGH
0901: ILGVRIAGVH PSDMDSYMTR LYSQFTLPDP SMMAVGIPTS SYWPYYCAES AYVEGQGADT ASQTSQEESV SASSFAEKGS SSVSSHVTDS SQQHSSAGWA
1001: GPPGFNPHTI SSQPPSTGRA GPPSFNPHAT AKKDSATARK PSQPCSKVHL AQSGGSQKRR SIV
001: MAQVQLQGQT PNGSTAAVTS APATSGGATA TQFGNTSLYV GDLDFNVTDS QLFDAFGQMG TVVTVRVCRD LVTRRSLGYG YVNFTNPQDA ARAIQELNYI
101: PLYGKPIRVM YSHRDPSVRR SGAGNIFIKN LDESIDHKAL HDTFSSFGNI VSCKVAVDSS GQSKGYGFVQ YANEESAQKA IEKLNGMLLN DKQVYVGPFL
201: RRQERDSTAN KTKFTNVYVK NLAESTTDDD LKNAFGEYGK ITSAVVMKDG EGKSKGFGFV NFENADDAAR AVESLNGHKF DDKEWYVGRA QKKSERETEL
301: RVRYEQNLKE AADKFQSSNL YVKNLDPSIS DEKLKEIFSP FGTVTSSKVM RDPNGTSKGS GFVAFATPEE ATEAMSQLSG KMIESKPLYV AIAQRKEDRR
401: VRLQAQFSQV RPVAMQPSVG PRMPVYPPGG PGIGQQMFYG QAPPAMIPPQ PGYGYQQQLV PGMRPGGGPV PSFFMPMVQP QQQRPGGGRR PGGIQHSQQQ
501: NPMMQQQMHP RGRMFRYPQG RGGSGDVPPY DMGNNMPLTI GALASNLSNA TPEQQRTMLG EVLYPLVEQV EAESAAKVTG MLLEMDQTEV LHLLESPEAL
601: KAKVAEAMDV LRSVAAGGAT EQLASLNLS
101: PLYGKPIRVM YSHRDPSVRR SGAGNIFIKN LDESIDHKAL HDTFSSFGNI VSCKVAVDSS GQSKGYGFVQ YANEESAQKA IEKLNGMLLN DKQVYVGPFL
201: RRQERDSTAN KTKFTNVYVK NLAESTTDDD LKNAFGEYGK ITSAVVMKDG EGKSKGFGFV NFENADDAAR AVESLNGHKF DDKEWYVGRA QKKSERETEL
301: RVRYEQNLKE AADKFQSSNL YVKNLDPSIS DEKLKEIFSP FGTVTSSKVM RDPNGTSKGS GFVAFATPEE ATEAMSQLSG KMIESKPLYV AIAQRKEDRR
401: VRLQAQFSQV RPVAMQPSVG PRMPVYPPGG PGIGQQMFYG QAPPAMIPPQ PGYGYQQQLV PGMRPGGGPV PSFFMPMVQP QQQRPGGGRR PGGIQHSQQQ
501: NPMMQQQMHP RGRMFRYPQG RGGSGDVPPY DMGNNMPLTI GALASNLSNA TPEQQRTMLG EVLYPLVEQV EAESAAKVTG MLLEMDQTEV LHLLESPEAL
601: KAKVAEAMDV LRSVAAGGAT EQLASLNLS
Arabidopsis Description
PAB2Polyadenylate-binding protein [Source:UniProtKB/TrEMBL;Acc:A0A178UWB3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.