Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G339300.1 | Wheat | cytosol | 92.26 | 92.41 |
| TraesCS7A01G440500.1 | Wheat | cytosol | 92.1 | 92.25 |
| TraesCS7D01G430000.2 | Wheat | cytosol | 90.52 | 90.81 |
| Os06t0688100-02 | Rice | cytosol | 73.78 | 75.08 |
| KXG20689 | Sorghum | cytosol | 66.51 | 67.79 |
| Zm00001d014575_P002 | Maize | cytosol | 65.09 | 62.42 |
| GSMUA_Achr3P11670_001 | Banana | cytosol | 52.61 | 52.69 |
| GSMUA_Achr1P19720_001 | Banana | cytosol | 52.29 | 52.62 |
| Zm00001d036138_P002 | Maize | cytosol | 18.33 | 48.13 |
| VIT_04s0044g01700.t01 | Wine grape | cytosol | 43.44 | 43.86 |
| CDY71933 | Canola | cytosol | 23.54 | 42.82 |
| KRH39395 | Soybean | cytosol | 42.18 | 42.52 |
| KRH07819 | Soybean | cytosol | 42.02 | 42.42 |
| Bra022989.1-P | Field mustard | cytosol | 37.44 | 40.58 |
| AT2G34750.1 | Thale cress | cytosol | 39.18 | 40.46 |
| CDX79576 | Canola | cytosol | 38.39 | 39.97 |
| CDX84629 | Canola | cytosol | 38.23 | 39.48 |
| Solyc02g082340.2.1 | Tomato | nucleus | 38.39 | 39.38 |
| AT1G30590.2 | Thale cress | cytosol | 37.76 | 39.37 |
| CDY43658 | Canola | cytosol | 37.6 | 39.34 |
| Bra021928.1-P | Field mustard | nucleus | 36.81 | 38.96 |
| CDY31637 | Canola | cytosol | 34.6 | 37.56 |
| CDX84284 | Canola | cytosol | 35.23 | 37.17 |
| AT2G39240.1 | Thale cress | cytosol | 33.18 | 36.65 |
| Bra005396.1-P | Field mustard | cytosol | 35.07 | 35.35 |
| VIT_04s0044g01800.t01 | Wine grape | cytosol, extracellular, nucleus | 8.69 | 29.89 |
| CDY36511 | Canola | plastid | 8.37 | 19.63 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G100370.1 | EnsemblPlantsGene:HORVU7Hr1G100370 | InterPro:RNA_pol_I_trans_ini_fac_RRN3 | PANTHER:PTHR12790 | PFAM:PF05327 | SEG:seg |
| UniParc:UPI000B466980 | UniProt:A0A287XKI8 | MapMan:15.2.1 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:604693989..604701301
Molecular Weight (calculated)
72076.8 Da
IEP (calculated)
4.583
GRAVY (calculated)
-0.107
Length
633 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAELRRDDM AGEAMPVRDA VAFRLVEHVL QSVRMEPLLV NPYDQEQYGK MLDTLDTSKR KSADDEALYV TYLKALSEAV SKIDIMYHHS LLNNIFSVRI
101: WYLQRDTMVA LLDLITRLAA VADQYLRECL QMLVNNFTPP IIVKHNNEVP PWAVSRKKEI FSRLCESLKT ISDTVPLAPR MLRDIIDRSM PKLFDNKAKM
201: ISFVECMLGL DTDRMGDLIG AILLAKVVDL ITELDVNITW EDILQEEHNK GIFEMELEDL DGDEDGDGFG QAGTKVLFGG NACAEKLDGL MVVVCEHLKS
301: LDRQCLYKEF VILKTIFRAS LLRVHRSKFA QFIMFYACSL DPLILGEEFA LFLTDIVKNK EEDPISRMSA VSYVGSYLSR ARFIPANTVV TILKKLVDWC
401: VGYCDYQSGR DATAIPNHQL FYATCQAVMY VLCFRLRSIM DYPNLKSDLF HMPFGFLFRH RLEPLKVCLP SIVNEFLRQA KDAGLVAAFV DPASEDAIES
501: DLSRTFGGID RLDMFFPFDP YLLKESDRYI RPNFEFWSMV KTTYSDDTDD DDDELEGLDA PEMNVGSLDD HVEIDINSDD DDLEYSMNKM SITPHHSFFH
601: QMAMDSDGGL SMPARIRPST SPPSRWAMSG GSP
101: WYLQRDTMVA LLDLITRLAA VADQYLRECL QMLVNNFTPP IIVKHNNEVP PWAVSRKKEI FSRLCESLKT ISDTVPLAPR MLRDIIDRSM PKLFDNKAKM
201: ISFVECMLGL DTDRMGDLIG AILLAKVVDL ITELDVNITW EDILQEEHNK GIFEMELEDL DGDEDGDGFG QAGTKVLFGG NACAEKLDGL MVVVCEHLKS
301: LDRQCLYKEF VILKTIFRAS LLRVHRSKFA QFIMFYACSL DPLILGEEFA LFLTDIVKNK EEDPISRMSA VSYVGSYLSR ARFIPANTVV TILKKLVDWC
401: VGYCDYQSGR DATAIPNHQL FYATCQAVMY VLCFRLRSIM DYPNLKSDLF HMPFGFLFRH RLEPLKVCLP SIVNEFLRQA KDAGLVAAFV DPASEDAIES
501: DLSRTFGGID RLDMFFPFDP YLLKESDRYI RPNFEFWSMV KTTYSDDTDD DDDELEGLDA PEMNVGSLDD HVEIDINSDD DDLEYSMNKM SITPHHSFFH
601: QMAMDSDGGL SMPARIRPST SPPSRWAMSG GSP
001: MGAVELMSDP SSLCTVENYV DNVDLSDTQL VQTVRKALTS VKTGDSDLYS EMVGVMARDI KEFKDPDVVA QLETVLKALS GAVACIDVLH HQKLLSALFR
101: MKLWDHRPDV MDALVNLVIS LAVTSGKYLD SCLNMLVSNF VPPPWVVNNL SHSRILNKKI DVLSRVHAAL LKISILVPLT PSRLVPMLFQ QMPKMHKKDH
201: SIVIYVESLL KLENSSIGQV GGSMILGMVM ERLRDLDLEI EWDDIPQDDS SRGMFDMELE DAAEGTMNDG DELPVGPLKQ DTSDGSIVSK LLDKLMVVAF
301: EHLESCQNDG RLDQVFESLF KSFENFILNT YKSKFTQFLI FYACSLDPEN CGVKFASKLV EIFLSSNKHV ATRMSAVAYL ASFLARGKFL PVSFVASMLK
401: RLIDECVGYC RTCNDDTRPE AHQIFFSGCQ AIMYVLCFRM RSILDVPRFR SQLTPLESIL MHKLNPLMVC LPSVVAEFLR QAKEGGLFIV SDSFIFDDLL
501: ESELSRAFGG FERLDTFFPF DPCLLKSSNS FISPNFIYWS MVKATYDEDD DDNDAEVIVN GDEDSDEDDE ADLDYALNKM SITPKHSFKN KMERDRLLRM
601: PSRIRPSTSP ESL
101: MKLWDHRPDV MDALVNLVIS LAVTSGKYLD SCLNMLVSNF VPPPWVVNNL SHSRILNKKI DVLSRVHAAL LKISILVPLT PSRLVPMLFQ QMPKMHKKDH
201: SIVIYVESLL KLENSSIGQV GGSMILGMVM ERLRDLDLEI EWDDIPQDDS SRGMFDMELE DAAEGTMNDG DELPVGPLKQ DTSDGSIVSK LLDKLMVVAF
301: EHLESCQNDG RLDQVFESLF KSFENFILNT YKSKFTQFLI FYACSLDPEN CGVKFASKLV EIFLSSNKHV ATRMSAVAYL ASFLARGKFL PVSFVASMLK
401: RLIDECVGYC RTCNDDTRPE AHQIFFSGCQ AIMYVLCFRM RSILDVPRFR SQLTPLESIL MHKLNPLMVC LPSVVAEFLR QAKEGGLFIV SDSFIFDDLL
501: ESELSRAFGG FERLDTFFPF DPCLLKSSNS FISPNFIYWS MVKATYDEDD DDNDAEVIVN GDEDSDEDDE ADLDYALNKM SITPKHSFKN KMERDRLLRM
601: PSRIRPSTSP ESL
Arabidopsis Description
RNA polymerase I specific transcription initiation factor RRN3 protein [Source:UniProtKB/TrEMBL;Acc:Q8L643]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.