Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH02874 | Soybean | cytosol | 92.4 | 92.4 |
| VIT_11s0052g00960.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 31.61 | 61.18 |
| CDY49304 | Canola | cytosol, golgi | 41.95 | 50.74 |
| CDY12994 | Canola | cytosol, golgi | 41.03 | 49.09 |
| CDY03541 | Canola | cytosol, golgi | 41.34 | 48.4 |
| CDY28171 | Canola | cytosol | 40.73 | 48.03 |
| CDY14181 | Canola | golgi | 40.73 | 47.69 |
| Bra010294.1-P | Field mustard | golgi | 40.73 | 47.52 |
| AT4G30240.1 | Thale cress | cytosol, golgi | 41.03 | 45.0 |
| AT2G18860.1 | Thale cress | cytosol | 39.82 | 44.26 |
| CDX68636 | Canola | cytosol | 39.21 | 43.14 |
| Bra011176.1-P | Field mustard | cytosol | 40.73 | 40.73 |
| GSMUA_Achr2P04930_001 | Banana | cytosol | 40.12 | 38.37 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, nucleus | 41.03 | 37.19 |
| CDY14469 | Canola | cytosol, golgi | 40.12 | 36.77 |
| GSMUA_Achr1P10310_001 | Banana | cytosol | 39.51 | 34.95 |
| KRH05610 | Soybean | nucleus | 32.83 | 32.34 |
| KRH61384 | Soybean | cytosol | 31.61 | 30.68 |
| Bra038827.1-P | Field mustard | cytosol, plasma membrane | 38.6 | 30.24 |
| Os08t0244100-01 | Rice | cytosol, golgi, nucleus | 32.83 | 29.92 |
| EES14780 | Sorghum | cytosol, golgi, nucleus | 30.7 | 28.29 |
| Zm00001d024418_P004 | Maize | cytosol | 30.4 | 27.1 |
| KRH52070 | Soybean | cytosol, nucleus, peroxisome | 31.61 | 26.74 |
Protein Annotations
| Gene3D:1.20.58.90 | EntrezGene:100776721 | MapMan:35.2 | EMBL:ACUP02012601 | EnsemblPlantsGene:GLYMA_20G083500 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | GO:GO:0048193 |
| UniProt:I1NEM7 | EnsemblPlants:KRG90327 | ProteinID:KRG90327 | ProteinID:KRG90327.1 | PFAM:PF09177 | PANTHER:PTHR34949 |
| PANTHER:PTHR34949:SF3 | InterPro:SNARE | SUPFAM:SSF47661 | InterPro:Syntaxin-6_N | TMHMM:TMhelix | UniParc:UPI000233D9FD |
Description
hypothetical protein
Coordinates
chr20:+:31448966..31452954
Molecular Weight (calculated)
38080.6 Da
IEP (calculated)
5.097
GRAVY (calculated)
-0.666
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVANSFDLW RKDAFFSAAE EVQESADIME SAYRAWLREK RERSTPEELN ELCRELQTAL GTAKWQLEEF DKAVRLSYRP HSDDNTSTRH RQFISAIESQ
101: ITQVEAALRE SYIEEGKQPL RWVNLDEEER DDLAAFLSGT CQTTQSTNDE YMEVKQAKKE DKIVDIYTFR NRDISASEKS SKDVISVNKD TDYLIEIKAD
201: AVSRSNDDLV SQTDRTTSTR KTWSPPNYGA LKIVIADEGE QRDKPTRTVD ATPKEKGFRN LFWKQKFEDY PQATRIVRMF NQRFGGIGIC QSQRQFQSPL
301: HLRYGCSVQV TLALMLTIFL IVPFVLYST
101: ITQVEAALRE SYIEEGKQPL RWVNLDEEER DDLAAFLSGT CQTTQSTNDE YMEVKQAKKE DKIVDIYTFR NRDISASEKS SKDVISVNKD TDYLIEIKAD
201: AVSRSNDDLV SQTDRTTSTR KTWSPPNYGA LKIVIADEGE QRDKPTRTVD ATPKEKGFRN LFWKQKFEDY PQATRIVRMF NQRFGGIGIC QSQRQFQSPL
301: HLRYGCSVQV TLALMLTIFL IVPFVLYST
001: MMVVNSFDLW QKDVFFSAAE EVQKSTDIME SAYRLWIREK KDEICKELQA ALGTAKWQLE EFEKAVRLSH KRCGDNDSSS TRHKQFVTAI ENQIHRVETS
101: LQEAYSENGK KPLRWVDLNE EERDDLAMFL SGSSRTSQSF SGESSIKSRE STNSSLVENV MEVSAKVTFK KAKVYGDGSE CVIDIEERVT PGQAEKSVGL
201: RRIWSSPNFN SLRIIVPGGD NEEEKETLVA QIEATPKVKG TKSVLWMQRL PDHNQLFDKT GCFQNPIRLP FNHPIKFIVS LLLMVFLLLP FVVYLS
101: LQEAYSENGK KPLRWVDLNE EERDDLAMFL SGSSRTSQSF SGESSIKSRE STNSSLVENV MEVSAKVTFK KAKVYGDGSE CVIDIEERVT PGQAEKSVGL
201: RRIWSSPNFN SLRIIVPGGD NEEEKETLVA QIEATPKVKG TKSVLWMQRL PDHNQLFDKT GCFQNPIRLP FNHPIKFIVS LLLMVFLLLP FVVYLS
Arabidopsis Description
At2g18860 [Source:UniProtKB/TrEMBL;Acc:Q501A1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.