Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG90327 | Soybean | cytosol | 92.4 | 92.4 |
| VIT_11s0052g00960.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 31.31 | 60.59 |
| CDY49304 | Canola | cytosol, golgi | 40.73 | 49.26 |
| CDY03541 | Canola | cytosol, golgi | 41.95 | 49.11 |
| CDY28171 | Canola | cytosol | 41.64 | 49.1 |
| CDY14181 | Canola | golgi | 41.34 | 48.4 |
| CDY12994 | Canola | cytosol, golgi | 40.12 | 48.0 |
| Bra010294.1-P | Field mustard | golgi | 41.03 | 47.87 |
| AT4G30240.1 | Thale cress | cytosol, golgi | 41.64 | 45.67 |
| CDX68636 | Canola | cytosol | 39.82 | 43.81 |
| AT2G18860.1 | Thale cress | cytosol | 39.21 | 43.58 |
| Bra011176.1-P | Field mustard | cytosol | 41.95 | 41.95 |
| CDY14469 | Canola | cytosol, golgi | 40.73 | 37.33 |
| GSMUA_Achr2P04930_001 | Banana | cytosol | 37.99 | 36.34 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, nucleus | 37.99 | 34.44 |
| GSMUA_Achr1P10310_001 | Banana | cytosol | 38.3 | 33.87 |
| KRH05610 | Soybean | nucleus | 31.91 | 31.44 |
| Bra038827.1-P | Field mustard | cytosol, plasma membrane | 38.3 | 30.0 |
| KRH61384 | Soybean | cytosol | 30.4 | 29.5 |
| Os08t0244100-01 | Rice | cytosol, golgi, nucleus | 31.61 | 28.81 |
| EES14780 | Sorghum | cytosol, golgi, nucleus | 30.7 | 28.29 |
| Zm00001d024418_P004 | Maize | cytosol | 31.31 | 27.91 |
| KRH52070 | Soybean | cytosol, nucleus, peroxisome | 30.4 | 25.71 |
Protein Annotations
| EMBL:ACUP02010328 | EnsemblPlants:KRH02874 | EnsemblPlantsGene:GLYMA_17G063600 | Gene3D:1.20.58.90 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | GO:GO:0048193 | InterPro:SNARE |
| InterPro:Syntaxin-6_N | PANTHER:PTHR34949 | PANTHER:PTHR34949:SF3 | PFAM:PF09177 | ProteinID:KRH02874 | ProteinID:KRH02874.1 |
| SUPFAM:SSF47661 | UniParc:UPI0006EDE7B0 | UniProt:A0A0R0F9H9 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr17:-:4891509..4893406
Molecular Weight (calculated)
37978.5 Da
IEP (calculated)
5.364
GRAVY (calculated)
-0.690
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVANSFDLW RKDGFFSAAE EVQESADIME SAYRAWLREK RERSTPEELN ELCRELQTAL GTAKWQLEEF DKAVRLSYRH HGDDNTSTRH RQFISAIESQ
101: ITQVEAALRE SYIEEGKQPL RWVNLDEEER DDLAAFLSGT CQTTQSTNDD CMEVKQAKKE DKIVDINTFR NRDISASEKS SKDVISVNKD TDYVIEIKAD
201: AVSRSNDDVV SQTDRTTSTR KTWSPPNYGA LKIVIADEDE QRDKPTRTVD ATPKEKGFRN LFWKQKFEEY PQAMRVVHMF NQRFGRIGIC QSQRQFQSPL
301: HLRYGCSVQV TLALMLTIFL IGKLSISCC
101: ITQVEAALRE SYIEEGKQPL RWVNLDEEER DDLAAFLSGT CQTTQSTNDD CMEVKQAKKE DKIVDINTFR NRDISASEKS SKDVISVNKD TDYVIEIKAD
201: AVSRSNDDVV SQTDRTTSTR KTWSPPNYGA LKIVIADEDE QRDKPTRTVD ATPKEKGFRN LFWKQKFEEY PQAMRVVHMF NQRFGRIGIC QSQRQFQSPL
301: HLRYGCSVQV TLALMLTIFL IGKLSISCC
001: MMVANSFDLW QKDVFFSAAE EVQESADIME SAYRLWFKEK RDGRVSVESD ELCKELQAAL STAKWQLEEF ERAVSLSHGN CRDDTTLTRH KQFVTAIENQ
101: IYQVESTLLE SLSENGKQPL RWVDLNKEER DDLAMFLSGS SQTSESLNSD SINLRDSSTS SVAENPRGIN GRREGRCYGD SPDCVIDIDD IGSPESADKK
201: GGTRRTWSSP NVPNISALRI NVPVNAKEEE REKFLSHIED TPKEKGAKPM FWLQRCRDYN QLFDRVKVYQ RRFRVPLSRP IKLILSLTLI LILLLFILRT
101: IYQVESTLLE SLSENGKQPL RWVDLNKEER DDLAMFLSGS SQTSESLNSD SINLRDSSTS SVAENPRGIN GRREGRCYGD SPDCVIDIDD IGSPESADKK
201: GGTRRTWSSP NVPNISALRI NVPVNAKEEE REKFLSHIED TPKEKGAKPM FWLQRCRDYN QLFDRVKVYQ RRFRVPLSRP IKLILSLTLI LILLLFILRT
Arabidopsis Description
AT4g30240/F9N11_90 [Source:UniProtKB/TrEMBL;Acc:Q944G8]
SUBAcon: [golgi,cytosol]
SUBAcon: [golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.