Factsheet for Os03t0748900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G392900.1	Wheat	cytosol	86.69	88.6
EER93456	Sorghum	cytosol	87.41	88.04
TraesCS5A01G387800.1	Wheat	cytosol	85.61	87.5
Zm00001d013271_P003	Maize	cytosol	86.69	85.77
TraesCS5D01G397700.2	Wheat	cytosol	84.53	84.84
GSMUA_Achr4P10680_001	Banana	cytosol	69.06	72.45
GSMUA_Achr8P04640_001	Banana	cytosol	66.19	69.17
VIT_08s0032g00290.t01	Wine grape	cytosol	65.11	67.54
PGSC0003DMT400018578	Potato	cytosol	65.11	65.82
KRH06674	Soybean	cytosol	65.11	65.58
Solyc10g076890.1.1	Tomato	cytosol	64.39	65.57
HORVU5Hr1G095000.1	Barley	nucleus	86.69	65.31
KRG94865	Soybean	cytosol	57.55	64.78
CDY38176	Canola	cytosol	61.15	64.64
Bra039914.1-P	Field mustard	cytosol	61.15	64.64
CDY25131	Canola	cytosol, mitochondrion, nucleus, plastid	60.43	63.16
AT5G32450.1	Thale cress	cytosol	57.91	60.3
CDY60084	Canola	cytosol, nucleus, plastid	13.31	48.68
Os06t0112400-01	Rice	plasma membrane	42.81	45.59
GSMUA_AchrUn_...	Banana	cytosol	25.54	44.1
Os03t0713600-01	Rice	cytosol	41.37	40.49
Zm00001d033453_P001	Maize	cytosol	43.53	36.01
Os04t0594400-01	Rice	plasma membrane	39.57	35.03
Os04t0641400-02	Rice	plastid	32.73	31.71
Os11t0549537-00	Rice	mitochondrion, plastid	24.82	28.51
Os04t0624800-01	Rice	nucleus	37.05	27.39

Protein Annotations

Gene3D:3.30.70.330	MapMan:35.1	EntrezGene:4334112	ProteinID:AAL58957.1	ProteinID:ABF98879.1	EMBL:AK061165
ProteinID:BAF13187.1	ProteinID:BAS86387.1	ProteinID:EEE59931.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	EnsemblPlantsGene:Os03g0748900	EnsemblPlants:Os03t0748900-01
PFAM:PF00076	PFscan:PS50102	PANTHER:PTHR32343	PANTHER:PTHR32343:SF9	UniProt:Q10CV5	InterPro:RBD_domain_sf
InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54928	UniParc:UPI00000A0231	RefSeq:XP_015627996.1	SEG:seg

Description

Aldo/keto reductase domain containing protein. (Os03t0748900-01)

Coordinates

chr3:+:30825190..30829241

Molecular Weight (calculated)

29988.6 Da

IEP (calculated)

9.762

GRAVY (calculated)

-0.231

Length

278 amino acids

Sequence
(BLAST)

001: MEGERRAVRT VRVRNISDLA GEREVREFFS FSGEIEHVDI RCDGVATGRT AYVTFKDPKA LEIALLLSGA TIVDRVVNIT PAEDYIYIPV TDQQLVVSEV
101: VGEVTSTAPN ADLDQPTEAN ASPTTGRVYV SKAHDVMTTV IARGSAMRQD AVNKAKAFDE KHQLRANASA KINSFDKRVG ISEKINSGIT VVNEKVKSVD
201: QRLHVSDKTM AALLAAERKL NDTGSAVKTN RYVSAGTSWL NGAFSKVAKA GHVAGSRTRE KFQIAVSNLT AKGPAVVA

Best Arabidopsis Sequence Match ( AT5G32450.1 )
(BLAST)

001: MQTTRSVQVN NVSDLATERE IHEFFSFSGD IEHIEIQKEF GQSRIAFVTF TDPKALEIAL LLSGATIVDQ IVTITRAENY VQRRETQEVR MLDNAMPLGL
101: QESTTQTKTN MDGNSRAYVS KAQDVVATVL AKGSALGQDA VNKAKAFDEK HQLRANASAK VSSFDKRVGL TEKLSVGISA VNEKVKSVDQ KLQVSDKTMA
201: AIFAAERKLN DTGSAVKSSR YVTAGAAWFS GAFSKVARVG QVAGSKTKEK FNLAVSNMSS KDTPIAV

Arabidopsis Description

Putative RRM-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8L9M9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.