Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P10680_001 | Banana | cytosol | 48.45 | 29.43 |
| VIT_08s0032g00290.t01 | Wine grape | cytosol | 44.1 | 26.49 |
| TraesCS5B01G392900.1 | Wheat | cytosol | 44.72 | 26.47 |
| TraesCS5D01G397700.2 | Wheat | cytosol | 44.72 | 25.99 |
| KRG94865 | Soybean | cytosol | 39.75 | 25.91 |
| TraesCS5A01G387800.1 | Wheat | cytosol | 43.48 | 25.74 |
| EER93456 | Sorghum | cytosol | 44.1 | 25.72 |
| Zm00001d013271_P003 | Maize | cytosol | 44.72 | 25.62 |
| GSMUA_Achr8P04640_001 | Banana | cytosol | 42.24 | 25.56 |
| Os03t0748900-01 | Rice | cytosol | 44.1 | 25.54 |
| Bra039914.1-P | Field mustard | cytosol | 41.61 | 25.48 |
| CDY38176 | Canola | cytosol | 41.61 | 25.48 |
| AT5G32450.1 | Thale cress | cytosol | 41.61 | 25.09 |
| PGSC0003DMT400018578 | Potato | cytosol | 42.86 | 25.09 |
| Solyc10g076890.1.1 | Tomato | cytosol | 42.24 | 24.91 |
| CDY25131 | Canola | cytosol, mitochondrion, nucleus, plastid | 40.99 | 24.81 |
| KRH06674 | Soybean | cytosol | 40.37 | 23.55 |
| GSMUA_Achr9P23330_001 | Banana | nucleus, peroxisome, plastid | 31.68 | 20.9 |
| Zm00001d033453_P001 | Maize | cytosol | 40.37 | 19.35 |
| HORVU5Hr1G095000.1 | Barley | nucleus | 44.1 | 19.24 |
| GSMUA_AchrUn_... | Banana | cytosol, extracellular, nucleus | 30.43 | 17.63 |
| GSMUA_Achr5P14070_001 | Banana | cytosol, nucleus, plastid | 27.95 | 16.19 |
| GSMUA_Achr3P19960_001 | Banana | cytosol | 24.22 | 16.12 |
| GSMUA_Achr8P14700_001 | Banana | plastid | 29.81 | 15.74 |
| GSMUA_Achr4P00600_001 | Banana | cytosol, nucleus, plastid | 29.19 | 15.02 |
| GSMUA_Achr4P03340_001 | Banana | nucleus | 11.8 | 10.38 |
| CDY60084 | Canola | cytosol, nucleus, plastid | 4.35 | 9.21 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP19400_001 | EnsemblPlants:GSMUA_AchrUn_randomT19400_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG19400_001 | PANTHER:PTHR32343 | PANTHER:PTHR32343:SF9 | SEG:seg |
| UniParc:UPI000295D415 | UniProt:M0UAJ9 | MapMan:35.2 | : | : | : |
Description
RNA recognition motif containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG19400_001]
Coordinates
chrchrUn_random:+:93414668..93416173
Molecular Weight (calculated)
18086.1 Da
IEP (calculated)
8.495
GRAVY (calculated)
0.017
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MCICQGATFV DRIVNIAPVE NYIPMVEEEF WLVRQKLLLL ETTCQILRVQ AVLVVNKPPL VKLMMFASKA STRASETAMV TSFDRQVGLS EKITAGISIV
101: NEKVKSVDEK LHVSDKTIAA LIAAEWKLND TGANVKTNRW QRLAILQAPE QERSSNWQSQ I
101: NEKVKSVDEK LHVSDKTIAA LIAAEWKLND TGANVKTNRW QRLAILQAPE QERSSNWQSQ I
001: MQTTRSVQVN NVSDLATERE IHEFFSFSGD IEHIEIQKEF GQSRIAFVTF TDPKALEIAL LLSGATIVDQ IVTITRAENY VQRRETQEVR MLDNAMPLGL
101: QESTTQTKTN MDGNSRAYVS KAQDVVATVL AKGSALGQDA VNKAKAFDEK HQLRANASAK VSSFDKRVGL TEKLSVGISA VNEKVKSVDQ KLQVSDKTMA
201: AIFAAERKLN DTGSAVKSSR YVTAGAAWFS GAFSKVARVG QVAGSKTKEK FNLAVSNMSS KDTPIAV
101: QESTTQTKTN MDGNSRAYVS KAQDVVATVL AKGSALGQDA VNKAKAFDEK HQLRANASAK VSSFDKRVGL TEKLSVGISA VNEKVKSVDQ KLQVSDKTMA
201: AIFAAERKLN DTGSAVKSSR YVTAGAAWFS GAFSKVARVG QVAGSKTKEK FNLAVSNMSS KDTPIAV
Arabidopsis Description
Putative RRM-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8L9M9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.