Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400074744 | Potato | cytosol | 87.07 | 86.82 |
| Solyc05g052740.1.1 | Tomato | cytosol | 83.62 | 83.38 |
| VIT_04s0008g04940.t01 | Wine grape | cytosol, peroxisome, plastid | 52.87 | 51.83 |
| KRH61843 | Soybean | cytosol, peroxisome, plastid | 47.99 | 48.97 |
| KRH16040 | Soybean | cytosol | 47.7 | 47.84 |
| KRH05073 | Soybean | cytosol | 47.99 | 47.71 |
| KRH52518 | Soybean | cytosol | 47.41 | 47.55 |
| Solyc03g119910.2.1 | Tomato | cytosol | 46.26 | 45.35 |
| Solyc06g066820.2.1 | Tomato | cytosol, peroxisome, plastid | 46.55 | 43.32 |
| CDY31424 | Canola | cytosol | 40.52 | 40.29 |
| GSMUA_Achr5P09790_001 | Banana | cytosol | 42.82 | 40.27 |
| Bra020909.1-P | Field mustard | cytosol | 40.23 | 40.0 |
| CDX76441 | Canola | cytosol | 39.66 | 39.43 |
| AT4G21690.1 | Thale cress | cytosol | 39.08 | 38.97 |
| GSMUA_Achr4P08970_001 | Banana | cytosol, nucleus, peroxisome | 41.09 | 38.86 |
| GSMUA_Achr7P13240_001 | Banana | cytosol, nucleus, peroxisome | 41.38 | 38.3 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plastid | 37.36 | 36.41 |
| TraesCS3B01G141800.1 | Wheat | cytosol | 35.06 | 33.06 |
| TraesCS3A01G122600.1 | Wheat | cytosol | 34.77 | 32.7 |
| Zm00001d039634_P001 | Maize | cytosol | 35.63 | 32.46 |
| HORVU3Hr1G022840.8 | Barley | cytosol | 35.06 | 32.45 |
| Os01t0177400-01 | Rice | golgi | 34.48 | 32.43 |
| TraesCS3D01G124500.1 | Wheat | cytosol | 34.2 | 32.16 |
| EES00202 | Sorghum | cytosol, peroxisome, plastid | 33.91 | 30.33 |
| TraesCS2A01G540400.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 31.9 | 30.0 |
| Os05t0178100-01 | Rice | plasma membrane | 32.47 | 29.66 |
| TraesCS2B01G570900.1 | Wheat | cytosol | 31.9 | 29.6 |
| TraesCS2D01G542100.1 | Wheat | cytosol | 31.61 | 29.49 |
| HORVU2Hr1G118350.1 | Barley | cytosol | 31.03 | 28.65 |
| Zm00001d037627_P001 | Maize | cytosol | 30.75 | 28.61 |
| TraesCS2B01G570800.2 | Wheat | cytosol | 31.61 | 26.89 |
| KXG21453 | Sorghum | cytosol, peroxisome, plastid | 30.46 | 25.79 |
| Os04t0517600-00 | Rice | cytosol, peroxisome | 10.63 | 18.05 |
Protein Annotations
| MapMan:11.6.1.6 | Gene3D:2.60.120.330 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0006629 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009686 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009987 |
| GO:GO:0016491 | GO:GO:0016707 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | UniProt:K4AW33 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF197 | SUPFAM:SSF51197 | EnsemblPlantsGene:Solyc01g058250.1 | EnsemblPlants:Solyc01g058250.1.1 | UniParc:UPI0002761F1C |
Description
No Description!
Coordinates
chr1:+:65853391..65854603
Molecular Weight (calculated)
39581.5 Da
IEP (calculated)
6.833
GRAVY (calculated)
-0.187
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTSTLEEAY KENPLSLQHI LPIDFQSIQE VPNSHLWPNI NNVPTSHNDK NPNVPIIDLI DPNVVELMGH ACKTWGIFQV VNHGISLKYF DEVESQARRL
101: FALPTEQKVK VVRSTNGVTG YGTARITPFF SKFMWHEGFT IVDSPLDHAK ELWPNDYKKF CDVMENYQTK MKVLSFQLCM FILNYLQPSH EHSINSFEFE
201: GALQLNSYPC CPNPYHALGL APHTDSLFLT ILHQTNNTKG LQILKKDQGW TSIAPVSNDA LIVNVGDLLH ILSNGEFPSV YHRVLVDQTK HRVSLAYFFG
301: PQVESIISPL VSSQDNDGVV LKYRNVTVKE YLGLKAKHLE KVFSMIRI
101: FALPTEQKVK VVRSTNGVTG YGTARITPFF SKFMWHEGFT IVDSPLDHAK ELWPNDYKKF CDVMENYQTK MKVLSFQLCM FILNYLQPSH EHSINSFEFE
201: GALQLNSYPC CPNPYHALGL APHTDSLFLT ILHQTNNTKG LQILKKDQGW TSIAPVSNDA LIVNVGDLLH ILSNGEFPSV YHRVLVDQTK HRVSLAYFFG
301: PQVESIISPL VSSQDNDGVV LKYRNVTVKE YLGLKAKHLE KVFSMIRI
001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE
Arabidopsis Description
GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.