Factsheet for TraesCS3D01G124500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G141800.1	Wheat	cytosol	93.78	94.04
TraesCS3A01G122600.1	Wheat	cytosol	93.51	93.51
HORVU3Hr1G022840.8	Barley	cytosol	94.59	93.09
Zm00001d039634_P001	Maize	cytosol	79.19	76.7
EES00202	Sorghum	cytosol, peroxisome, plastid	77.57	73.78
Os01t0177400-01	Rice	golgi	72.7	72.7
TraesCS2D01G542100.1	Wheat	cytosol	64.32	63.81
CDX87302	Canola	cytosol	10.81	51.95
GSMUA_Achr5P09790_001	Banana	cytosol	44.05	44.05
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	41.35	40.69
VIT_04s0008g04940.t01	Wine grape	cytosol, peroxisome, plastid	38.38	40.0
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	39.73	39.95
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	38.38	39.78
VIT_09s0002g05300.t01	Wine grape	cytosol	38.11	39.28
CDY39986	Canola	cytosol	13.24	39.2
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	38.65	39.18
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	39.19	38.98
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	39.19	38.77
PGSC0003DMT400014555	Potato	cytosol	36.76	38.2
Solyc03g119910.2.1	Tomato	cytosol	36.49	38.03
CDY39663	Canola	cytosol, nucleus, peroxisome	36.76	37.88
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	36.76	37.88
CDY68965	Canola	cytosol, nucleus, peroxisome	36.49	37.71
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	36.49	37.71
AT1G15550.1	Thale cress	cytosol, nucleus, peroxisome	36.49	37.71
KRH09799	Soybean	cytosol, nucleus, peroxisome	35.95	37.68
CDY36572	Canola	cytosol, nucleus, peroxisome	36.49	37.6
CDX81720	Canola	cytosol, nucleus, peroxisome	36.22	37.43
KRH61843	Soybean	cytosol, peroxisome, plastid	34.32	37.24
KRH23520	Soybean	cytosol	35.14	36.93
KRH05073	Soybean	cytosol	34.59	36.57
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	35.14	36.31
AT1G80340.1	Thale cress	cytosol	33.78	36.02
CDY37589	Canola	cytosol, nucleus, peroxisome	34.59	35.75
CDY38661	Canola	cytosol, nucleus, peroxisome	34.59	35.75
KRH44397	Soybean	cytosol	36.22	35.73
CDY37588	Canola	cytosol, nucleus, peroxisome	33.78	35.61
KRH52518	Soybean	cytosol	33.24	35.45
Bra008481.1-P	Field mustard	cytosol	33.51	35.33
PGSC0003DMT400059595	Potato	cytosol	32.97	34.96
KRH47509	Soybean	cytosol	35.68	34.92
KRH16040	Soybean	cytosol	32.7	34.87
CDY38660	Canola	cytosol	32.97	34.76
CDY31424	Canola	cytosol	32.43	34.29
Bra020909.1-P	Field mustard	cytosol	32.43	34.29
Solyc01g058250.1.1	Tomato	cytosol	32.16	34.2
PGSC0003DMT400074744	Potato	cytosol	31.89	33.81
AT1G80330.1	Thale cress	cytosol	32.43	33.8
CDX76441	Canola	cytosol	31.89	33.71
PGSC0003DMT400086139	Potato	cytosol	31.62	33.52
Solyc05g052740.1.1	Tomato	cytosol	31.08	32.95
AT4G21690.1	Thale cress	cytosol	30.54	32.38
PGSC0003DMT400044153	Potato	nucleus	25.14	31.63
CDX87303	Canola	cytosol	14.59	30.86

Protein Annotations

EnsemblPlants:TraesCS3D01G124500.1	EnsemblPlantsGene:TraesCS3D01G124500	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF245	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:11.6.1.6	:	:

Description

No Description!

Coordinates

chr3D:+:82411917..82413425

Molecular Weight (calculated)

40357.4 Da

IEP (calculated)

7.243

GRAVY (calculated)

-0.077

Length

370 amino acids

Sequence
(BLAST)

001: MPTPAHLSKD PRYFDFRAAR RVPETHAWPG LHDHPVVDGS GAGGGPDAVP VVDMRDPCAA EAVALAAQDW GAFLLEGHGV PLELLARVEA AIAGMFALPA
101: SEKMRAVRRP GDSCGYGSPP ISSFFSKCMW SEGYTFSPAN LRSDLRKLWP KAGHDYRHFC AVMEEFHREM RALADKLLEL FLVALGLTGE QVAAVESEQK
201: IAETMTATMH LNWYPKCPDP KRALGLIAHT DSGFFTFVLQ SLVPGLQLFR HGPDRWVTVP AVPGAMVVNV GDLFQILTNG RFHSVYHRAV VNRDSDRISL
301: GYFLGPPAHV KVAPLREALA GTPAAYRAVT WPEYMGVRKK AFTTGASALK MVAISTDNDA ANHTDDLISS

Best Arabidopsis Sequence Match ( AT1G15550.1 )
(BLAST)

001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE

Arabidopsis Description

GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.