CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23520	Soybean	cytosol	92.92	93.18
KRH44397	Soybean	cytosol	71.95	67.73
KRH47509	Soybean	cytosol	72.24	67.46
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	66.57	64.38
CDX87302	Canola	cytosol	13.88	63.64
PGSC0003DMT400014555	Potato	cytosol	63.46	62.92
Solyc03g119910.2.1	Tomato	cytosol	62.61	62.25
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	63.17	59.63
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	62.61	59.41
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	58.92	58.1
CDX81720	Canola	cytosol, nucleus, peroxisome	58.92	58.1
CDY68965	Canola	cytosol, nucleus, peroxisome	58.92	58.1
AT1G15550.1	Thale cress	cytosol, nucleus, peroxisome	58.36	57.54
CDY39663	Canola	cytosol, nucleus, peroxisome	58.07	57.1
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	57.51	56.55
CDY36572	Canola	cytosol, nucleus, peroxisome	57.22	56.27
CDY39986	Canola	cytosol	19.83	56.0
VIT_09s0002g05300.t01	Wine grape	cytosol	56.66	55.71
AT1G80340.1	Thale cress	cytosol	54.67	55.62
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	55.52	54.75
CDY38661	Canola	cytosol, nucleus, peroxisome	55.24	54.47
CDY37589	Canola	cytosol, nucleus, peroxisome	54.96	54.19
CDX87303	Canola	cytosol	25.5	51.43
AT1G80330.1	Thale cress	cytosol	49.29	49.01
GSMUA_Achr5P09790_001	Banana	cytosol	51.27	48.92
CDY37588	Canola	cytosol, nucleus, peroxisome	48.16	48.43
Bra008481.1-P	Field mustard	cytosol	47.88	48.15
CDY38660	Canola	cytosol	47.03	47.29
KRH61843	Soybean	cytosol, peroxisome, plastid	44.48	46.04
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	48.73	45.74
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	46.18	45.66
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	46.18	44.29
KRH05073	Soybean	cytosol	43.63	44.0
KRH52518	Soybean	cytosol	43.06	43.8
KRH16040	Soybean	cytosol	43.06	43.8
Os01t0177400-01	Rice	golgi	38.53	36.76
Zm00001d039634_P001	Maize	cytosol	39.66	36.65
TraesCS3D01G124500.1	Wheat	cytosol	37.68	35.95
TraesCS3A01G122600.1	Wheat	cytosol	37.68	35.95
TraesCS3B01G141800.1	Wheat	cytosol	37.39	35.77
HORVU3Hr1G022840.8	Barley	cytosol	37.68	35.37
TraesCS2A01G540400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	36.54	34.86
EES00202	Sorghum	cytosol, peroxisome, plastid	38.24	34.7
TraesCS2D01G542100.1	Wheat	cytosol	36.26	34.32
TraesCS2B01G570900.1	Wheat	cytosol	35.13	33.07
Zm00001d037627_P001	Maize	cytosol	33.71	31.82
HORVU2Hr1G118350.1	Barley	cytosol	33.71	31.57
Os05t0178100-01	Rice	plasma membrane	33.71	31.23
TraesCS2B01G570800.2	Wheat	cytosol	35.13	30.32
KXG21453	Sorghum	cytosol, peroxisome, plastid	33.99	29.2
Os04t0517600-00	Rice	cytosol, peroxisome	13.88	23.9

Protein Annotations

EntrezGene:100798572	MapMan:11.6.1.6	Gene3D:2.60.120.330	EMBL:ACUP02009109	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_15G012100
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009416	GO:GO:0009628	GO:GO:0009686
GO:GO:0009719	GO:GO:0009740	GO:GO:0009987	GO:GO:0016491	GO:GO:0016707	GO:GO:0046872
GO:GO:0055114	UniProt:I1MCK0	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KRH09799
ProteinID:KRH09799	ProteinID:KRH09799.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF95	SUPFAM:SSF51197	UniParc:UPI000233B8AB	SEG:seg	:

Description

hypothetical protein

Coordinates

chr15:-:964629..966624

Molecular Weight (calculated)

39315.2 Da

IEP (calculated)

7.919

GRAVY (calculated)

-0.264

Length

353 amino acids

Sequence
(BLAST)

001: MPSLSEAYRS HPVHVQHKHP DLNSLQELPE SYTWTHHGHD DHTNSPASNE SVPVIDLNDP NASKLIHHAC TTWGAYQVLN HGIPMSLLQD IQWVGETLFS
101: LPSHQKHKAA RSPDGVDGYG LARISSFFPK LMWSEGFTIV GSPLEHFRQL WPQDYDKYCD FVMQYDEAMK KLVGKLMLLM LDSLGITKED LKWAGSKGQF
201: EKTCAALQLN SYPTCPDPDR AMGLAAHTDS TLLTILYQNN ISGLQVHRKG VGWVTVPPLS GGLVINVGDL LHILSNGLYP SVLHRVLVNR IQRRLSVAYL
301: CGPPPNVEIC PHAKLVGPNK PPLYKAVTWN EYLGTKAKHF NKALSTVRLC APS

Best Arabidopsis Sequence Match ( AT1G15550.1 )
(BLAST)

001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE

Arabidopsis Description

GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.