Factsheet for TraesCS2D01G542100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G540400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	86.06	86.76
TraesCS2B01G570900.1	Wheat	cytosol	82.04	81.6
TraesCS3D01G124500.1	Wheat	cytosol	63.81	64.32
HORVU2Hr1G118350.1	Barley	cytosol	63.27	62.6
Zm00001d039634_P001	Maize	cytosol	61.66	60.21
Os01t0177400-01	Rice	golgi	59.25	59.73
EES00202	Sorghum	cytosol, peroxisome, plastid	60.86	58.35
CDX87302	Canola	cytosol	9.65	46.75
GSMUA_Achr5P09790_001	Banana	cytosol	40.48	40.81
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	38.34	39.18
VIT_04s0008g04940.t01	Wine grape	cytosol, peroxisome, plastid	37.0	38.87
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	38.61	38.3
VIT_09s0002g05300.t01	Wine grape	cytosol	36.46	37.88
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	37.27	37.77
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	35.92	37.53
PGSC0003DMT400014555	Potato	cytosol	35.39	37.08
Solyc03g119910.2.1	Tomato	cytosol	35.12	36.9
KRH09799	Soybean	cytosol, nucleus, peroxisome	34.32	36.26
CDY39986	Canola	cytosol	12.06	36.0
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	34.32	35.75
CDY68965	Canola	cytosol, nucleus, peroxisome	34.32	35.75
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	35.66	35.56
KRH23520	Soybean	cytosol	33.51	35.51
CDX81720	Canola	cytosol, nucleus, peroxisome	34.05	35.47
KRH61843	Soybean	cytosol, peroxisome, plastid	32.17	35.19
KRH05073	Soybean	cytosol	32.71	34.86
CDY39663	Canola	cytosol, nucleus, peroxisome	33.51	34.82
KRH52518	Soybean	cytosol	32.17	34.58
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	33.24	34.54
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	34.32	34.41
AT1G15550.1	Thale cress	cytosol, nucleus, peroxisome	32.98	34.36
CDY36572	Canola	cytosol, nucleus, peroxisome	32.98	34.26
CDY37588	Canola	cytosol, nucleus, peroxisome	32.17	34.19
AT1G80340.1	Thale cress	cytosol	31.64	34.01
Bra008481.1-P	Field mustard	cytosol	31.9	33.9
CDY38660	Canola	cytosol	31.9	33.9
KRH16040	Soybean	cytosol	31.37	33.72
KRH44397	Soybean	cytosol	33.78	33.6
AT1G80330.1	Thale cress	cytosol	31.9	33.52
CDY37589	Canola	cytosol, nucleus, peroxisome	32.17	33.52
KRH47509	Soybean	cytosol	33.78	33.33
CDY38661	Canola	cytosol, nucleus, peroxisome	31.9	33.24
CDY31424	Canola	cytosol	31.1	33.14
Bra020909.1-P	Field mustard	cytosol	31.1	33.14
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	31.64	32.96
CDX76441	Canola	cytosol	30.83	32.86
AT4G21690.1	Thale cress	cytosol	30.56	32.66
PGSC0003DMT400059595	Potato	cytosol	30.29	32.38
PGSC0003DMT400074744	Potato	cytosol	29.76	31.81
PGSC0003DMT400086139	Potato	cytosol	29.76	31.81
Solyc01g058250.1.1	Tomato	cytosol	29.49	31.61
Solyc05g052740.1.1	Tomato	cytosol	29.49	31.52
PGSC0003DMT400044153	Potato	nucleus	24.13	30.61
CDX87303	Canola	cytosol	13.14	28.0

Protein Annotations

EnsemblPlants:TraesCS2D01G542100.1	EnsemblPlantsGene:TraesCS2D01G542100	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF245	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SUPFAM:SSF51197	MapMan:11.6.1.6	:	:	:

Description

No Description!

Coordinates

chr2D:-:620684627..620686402

Molecular Weight (calculated)

40899.6 Da

IEP (calculated)

6.963

GRAVY (calculated)

-0.274

Length

373 amino acids

Sequence
(BLAST)

001: MSAPSQLSKH PHNNYFDFGA ARQVPETHTW EGLYEHPLVD GGVGAAEDAV PVVDLRDPHA AEAVARASEQ WGTFLLEGHG IPSELLARVE AGIASMFALP
101: ASEKMRAARQ DGQSHGYGLP PIASYFPKTT RSEGYTLSPA NLRAELRKMW PDAGEDYRHF CDVMEEFHRQ MRLASDKLTV LFLAALGVAG VEAERKIVDT
201: MSETVTMHLN WYPKCPDPKR TLGLATHTDS GFFTFVMQSH VSGMQLFRRG PDRWPGLVGV PPGALIVNIS DLFQILTNGR FCSTYHRAVV NRDSTRVSVA
301: YHLGPPAGVK VAPLREAVGC GKPAYRTVTW REYFLVRKEA FATGGSALQM VSLSPGDHKN HGDGADQISE ISS

Best Arabidopsis Sequence Match ( AT1G15550.1 )
(BLAST)

001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE

Arabidopsis Description

GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.