CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16040	Soybean	cytosol	86.29	87.03
KRH61843	Soybean	cytosol, peroxisome, plastid	72.86	74.78
KRH52518	Soybean	cytosol	72.29	72.91
VIT_04s0008g04940.t01	Wine grape	cytosol, peroxisome, plastid	53.43	52.68
PGSC0003DMT400074744	Potato	cytosol	49.43	49.57
Solyc01g058250.1.1	Tomato	cytosol	47.71	47.99
Solyc05g052740.1.1	Tomato	cytosol	47.43	47.56
PGSC0003DMT400059595	Potato	cytosol	47.14	47.28
PGSC0003DMT400086139	Potato	cytosol	47.14	47.28
KRH44397	Soybean	cytosol	49.43	46.13
KRH23520	Soybean	cytosol	44.57	44.32
KRH09799	Soybean	cytosol, nucleus, peroxisome	44.0	43.63
KRH47509	Soybean	cytosol	46.86	43.39
CDY31424	Canola	cytosol	42.0	42.0
GSMUA_Achr5P09790_001	Banana	cytosol	44.29	41.89
CDX76441	Canola	cytosol	41.71	41.71
Bra020909.1-P	Field mustard	cytosol	41.71	41.71
PGSC0003DMT400044153	Potato	nucleus	34.57	41.16
AT4G21690.1	Thale cress	cytosol	40.86	40.97
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	41.14	39.13
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	42.0	39.1
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	38.29	37.53
TraesCS3B01G141800.1	Wheat	cytosol	37.14	35.23
Os01t0177400-01	Rice	golgi	37.14	35.14
TraesCS3A01G122600.1	Wheat	cytosol	36.86	34.86
TraesCS3D01G124500.1	Wheat	cytosol	36.57	34.59
Zm00001d039634_P001	Maize	cytosol	37.71	34.55
HORVU3Hr1G022840.8	Barley	cytosol	36.29	33.78
TraesCS2A01G540400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	35.43	33.51
HORVU2Hr1G118350.1	Barley	cytosol	35.43	32.89
TraesCS2D01G542100.1	Wheat	cytosol	34.86	32.71
EES00202	Sorghum	cytosol, peroxisome, plastid	36.0	32.39
TraesCS2B01G570900.1	Wheat	cytosol	34.57	32.27
TraesCS2B01G570800.2	Wheat	cytosol	36.57	31.3
Os05t0178100-01	Rice	plasma membrane	34.0	31.23
Zm00001d037627_P001	Maize	cytosol	33.14	31.02
KXG21453	Sorghum	cytosol, peroxisome, plastid	34.86	29.68
Os04t0517600-00	Rice	cytosol, peroxisome	12.0	20.49

Protein Annotations

EntrezGene:100808546	MapMan:11.6.1.6	Gene3D:2.60.120.330	EMBL:ACUP02010664	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_17G205300
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009416	GO:GO:0009628	GO:GO:0009686
GO:GO:0009719	GO:GO:0009740	GO:GO:0009987	GO:GO:0016491	GO:GO:0016707	GO:GO:0046872
GO:GO:0055114	UniProt:I1MWM9	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KRH05073
ProteinID:KRH05073	ProteinID:KRH05073.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF197	SUPFAM:SSF51197	UniParc:UPI000233F4FF	SEG:seg

Description

hypothetical protein

Coordinates

chr17:+:33370565..33373187

Molecular Weight (calculated)

39129.1 Da

IEP (calculated)

7.152

GRAVY (calculated)

-0.246

Length

350 amino acids

Sequence
(BLAST)

001: MATTLSEAYR DHPLHLHHII PLDFSSLRTL PDSHAWPQSE DGDGDDDNHG IGSPIPIIDL MDPNAMELIG LACENWGAFQ LKNHGIPLSV VEEVEEEAKR
101: LFALPADRKL KALRSATGAT GYGRARISPF FPKHMWHEGF TIMGSPCDDA KKIWPNDYAP FCTIMDNYQK QMKALADKLA HMIFNLLGGI SEEQKRWING
201: STNNLCEAVQ LNFYPRCPEP NRAMGLAPHT DTSLLTILHQ SQTNGLQIFK EGAGWVPVHP HPSSLVVHTG DILHILSNSR FRCALHRVMV NSARERYSVA
301: YFYGPPVDHV VSPLVLDSLP RFRSLTVKEY IGIKAKNLRG ALSLISMLKN

Best Arabidopsis Sequence Match ( AT1G15550.1 )
(BLAST)

001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE

Arabidopsis Description

GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.