CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 2
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52518	Soybean	cytosol	90.32	88.76
KRH05073	Soybean	cytosol	74.78	72.86
KRH16040	Soybean	cytosol	72.14	70.89
VIT_04s0008g04940.t01	Wine grape	cytosol, peroxisome, plastid	53.67	51.55
Solyc01g058250.1.1	Tomato	cytosol	48.97	47.99
PGSC0003DMT400074744	Potato	cytosol	48.97	47.85
PGSC0003DMT400059595	Potato	cytosol	46.92	45.85
Solyc05g052740.1.1	Tomato	cytosol	46.92	45.85
KRH44397	Soybean	cytosol	50.15	45.6
PGSC0003DMT400086139	Potato	cytosol	46.33	45.27
KRH23520	Soybean	cytosol	46.63	45.17
KRH09799	Soybean	cytosol, nucleus, peroxisome	46.04	44.48
KRH47509	Soybean	cytosol	48.39	43.65
GSMUA_Achr5P09790_001	Banana	cytosol	44.87	41.35
PGSC0003DMT400044153	Potato	nucleus	35.48	41.16
AT4G21690.1	Thale cress	cytosol	41.64	40.69
CDX76441	Canola	cytosol	41.35	40.29
Bra020909.1-P	Field mustard	cytosol	41.35	40.29
CDY31424	Canola	cytosol	41.06	40.0
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	43.7	39.63
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	42.23	39.13
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	40.47	38.66
Os01t0177400-01	Rice	golgi	38.71	35.68
Zm00001d039634_P001	Maize	cytosol	39.0	34.82
TraesCS3B01G141800.1	Wheat	cytosol	37.54	34.69
TraesCS3A01G122600.1	Wheat	cytosol	37.54	34.59
TraesCS3D01G124500.1	Wheat	cytosol	37.24	34.32
TraesCS2A01G540400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	36.95	34.05
HORVU3Hr1G022840.8	Barley	cytosol	37.54	34.04
HORVU2Hr1G118350.1	Barley	cytosol	36.66	33.16
TraesCS2B01G570900.1	Wheat	cytosol	36.36	33.07
EES00202	Sorghum	cytosol, peroxisome, plastid	37.54	32.9
Zm00001d037627_P001	Maize	cytosol	36.07	32.89
TraesCS2D01G542100.1	Wheat	cytosol	35.19	32.17
Os05t0178100-01	Rice	plasma membrane	35.48	31.76
TraesCS2B01G570800.2	Wheat	cytosol	36.66	30.56
KXG21453	Sorghum	cytosol, peroxisome, plastid	36.66	30.41
Os04t0517600-00	Rice	cytosol, peroxisome	11.14	18.54

Protein Annotations

EntrezGene:100818754	MapMan:11.6.1.6	Gene3D:2.60.120.330	EMBL:ACUP02002190	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_04G071000
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009416	GO:GO:0009628	GO:GO:0009686
GO:GO:0009719	GO:GO:0009740	GO:GO:0009987	GO:GO:0016491	GO:GO:0016707	GO:GO:0046872
GO:GO:0055114	UniProt:I1JUH8	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KRH61843
ProteinID:KRH61843	ProteinID:KRH61843.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF197	SUPFAM:SSF51197	UniParc:UPI000233A95D	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:5923731..5925765

Molecular Weight (calculated)

38422.9 Da

IEP (calculated)

7.131

GRAVY (calculated)

-0.238

Length

341 amino acids

Sequence
(BLAST)

001: MNTLSEAYKA HPLHLSHIIP LDFSSALSLP DSHAWPHCQP NDDASSSSSS SSIPIIDLMD PNAMDLIGHA CEKWGAFQLK NHGIPFGVIE DVEEEAKRLF
101: ALPTEQKLKA LRSPGGATGY GRARISPFFP KFMWHEGFTI IGSPSHDAKK IWPNDYARFC DLMENYEKQM KVLADRLTEM IFNLMDISEE KRKWVGASNI
201: SEAVQLNFYP SCPEPNRAMG LAPHTDTSLF TILHQSQITG LQIFKEGKGW VPVHPHPNTL VVHTGDLLHI ISNARFRCAL HRVTVNRTWE RYSVAYFYSP
301: PMDYVVSPLV HSVARFRDVT VKEYIGIKAK NFGEALSFIS T

Best Arabidopsis Sequence Match ( AT1G15550.1 )
(BLAST)

001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE

Arabidopsis Description

GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.