Factsheet for Os05t0178100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 5
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037627_P001	Maize	cytosol	57.74	58.82
Os01t0177400-01	Rice	golgi	53.28	54.86
KXG21453	Sorghum	cytosol, peroxisome, plastid	56.43	52.31
CDX87302	Canola	cytosol	10.24	50.65
CDY39986	Canola	cytosol	13.91	42.4
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	40.42	40.96
GSMUA_Achr5P09790_001	Banana	cytosol	38.58	39.73
VIT_04s0008g04940.t01	Wine grape	cytosol, peroxisome, plastid	35.43	38.03
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	34.12	36.41
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	35.17	36.41
KRH61843	Soybean	cytosol, peroxisome, plastid	31.76	35.48
Bra008481.1-P	Field mustard	cytosol	32.28	35.04
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	32.81	34.92
CDY68965	Canola	cytosol, nucleus, peroxisome	32.81	34.92
KRH52518	Soybean	cytosol	31.76	34.87
Bra020909.1-P	Field mustard	cytosol	32.02	34.86
CDY39663	Canola	cytosol, nucleus, peroxisome	32.81	34.82
CDY37588	Canola	cytosol, nucleus, peroxisome	32.02	34.76
AT1G15550.1	Thale cress	cytosol, nucleus, peroxisome	32.55	34.64
CDX76441	Canola	cytosol	31.76	34.57
CDY31424	Canola	cytosol	31.76	34.57
VIT_09s0002g05300.t01	Wine grape	cytosol	32.55	34.54
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	32.55	34.54
CDX81720	Canola	cytosol, nucleus, peroxisome	32.28	34.36
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	32.28	34.36
CDY37589	Canola	cytosol, nucleus, peroxisome	32.28	34.36
CDY36572	Canola	cytosol, nucleus, peroxisome	32.28	34.26
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	32.81	34.25
Solyc03g119910.2.1	Tomato	cytosol	31.76	34.08
AT1G80340.1	Thale cress	cytosol	30.97	34.01
KRH05073	Soybean	cytosol	31.23	34.0
CDY38660	Canola	cytosol	31.23	33.9
AT4G21690.1	Thale cress	cytosol	30.97	33.81
KRH23520	Soybean	cytosol	31.23	33.81
CDY38661	Canola	cytosol, nucleus, peroxisome	31.76	33.8
KRH16040	Soybean	cytosol	30.71	33.72
KRH09799	Soybean	cytosol, nucleus, peroxisome	31.23	33.71
PGSC0003DMT400014555	Potato	cytosol	31.5	33.71
PGSC0003DMT400059595	Potato	cytosol	30.45	33.24
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	32.28	33.06
AT1G80330.1	Thale cress	cytosol	30.45	32.68
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	32.02	32.62
Solyc01g058250.1.1	Tomato	cytosol	29.66	32.47
PGSC0003DMT400086139	Potato	cytosol	29.66	32.38
PGSC0003DMT400074744	Potato	cytosol	29.4	32.09
Solyc05g052740.1.1	Tomato	cytosol	29.4	32.09
KRH44397	Soybean	cytosol	31.5	32.0
KRH47509	Soybean	cytosol	31.23	31.48
PGSC0003DMT400044153	Potato	nucleus	22.05	28.57
Os04t0517600-00	Rice	cytosol, peroxisome	15.22	28.29
CDX87303	Canola	cytosol	11.81	25.71

Protein Annotations

MapMan:11.6.1.6	Gene3D:2.60.120.330	UniProt:A0A0P0WII8	ProteinID:BAS92534.1	InterPro:DIOX_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009416	GO:GO:0009628	GO:GO:0009685	GO:GO:0009686
GO:GO:0009719	GO:GO:0009740	GO:GO:0009987	GO:GO:0016491	GO:GO:0016707	GO:GO:0046872
GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlantsGene:Os05g0178100	EnsemblPlants:Os05t0178100-01
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF245
SUPFAM:SSF51197	UniParc:UPI0003D52617	SEG:seg	:	:	:

Description

GIBBERELLIN 3BETA-HYDROXYLASE 1GA 3beta-hydroxylase1, GA metabolism (Os05t0178100-01)

Coordinates

chr5:-:4660662..4662565

Molecular Weight (calculated)

41184.9 Da

IEP (calculated)

6.357

GRAVY (calculated)

-0.204

Length

381 amino acids

Sequence
(BLAST)

001: MTSSSTSPTS PTSPLAAAAD NGVAAAYFNF RGAERVPESH VWKGMHEKDT APVAAADADG GDAVPVVDMS GGDDAAVAAV ARAAEEWGGF LLVGHGVTAE
101: ALARVEAQAA RLFALPADDK ARGARRPGGG NTGYGVPPYL LRYPKQMWAE GYTFPPPAIR DEFRRVWPDA GDDYHRFCSA MEEYDSSMRA LGERLLAMFF
201: KALGLAGNDA PGGETERKIR ETLTSTIHLN MFPRCPDPDR VVGLAAHTDS GFFTFILQSP VPGLQLLRHR PDRWVTVPGT PGALIVVVGD LFHVLTNGRF
301: HSVFHRAVVN RERDRISMPY FLGPPADMKV TPLVAAGSPE SKAVYQAVTW PEYMAVRDKL FGTNISALSM IRVAKEEDKE S

Best Arabidopsis Sequence Match ( AT1G15550.1 )
(BLAST)

001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE

Arabidopsis Description

GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.