Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37588 | Canola | cytosol, nucleus, peroxisome | 93.16 | 93.16 |
| AT1G80330.1 | Thale cress | cytosol | 82.34 | 81.41 |
| CDX87302 | Canola | cytosol | 13.68 | 62.34 |
| CDY39663 | Canola | cytosol, nucleus, peroxisome | 55.56 | 54.32 |
| CDY68965 | Canola | cytosol, nucleus, peroxisome | 54.42 | 53.35 |
| CDY36572 | Canola | cytosol, nucleus, peroxisome | 54.42 | 53.2 |
| CDX81720 | Canola | cytosol, nucleus, peroxisome | 54.13 | 53.07 |
| CDY39986 | Canola | cytosol | 18.52 | 52.0 |
| CDY37589 | Canola | cytosol, nucleus, peroxisome | 52.42 | 51.4 |
| CDY38661 | Canola | cytosol, nucleus, peroxisome | 52.42 | 51.4 |
| Solyc03g119910.2.1 | Tomato | cytosol | 51.85 | 51.27 |
| VIT_09s0002g05270.t01 | Wine grape | cytosol, nucleus, peroxisome | 52.14 | 50.14 |
| PGSC0003DMT400014555 | Potato | cytosol | 50.71 | 50.0 |
| Solyc06g066820.2.1 | Tomato | cytosol, peroxisome, plastid | 52.99 | 49.73 |
| PGSC0003DMT400042582 | Potato | cytosol, nucleus, peroxisome | 51.0 | 48.12 |
| KRH44397 | Soybean | cytosol | 51.0 | 47.73 |
| VIT_09s0002g05300.t01 | Wine grape | cytosol | 48.72 | 47.63 |
| KRH47509 | Soybean | cytosol | 51.0 | 47.35 |
| KRH09799 | Soybean | cytosol, nucleus, peroxisome | 47.29 | 47.03 |
| KRH23520 | Soybean | cytosol | 46.72 | 46.59 |
| GSMUA_Achr5P09790_001 | Banana | cytosol | 45.01 | 42.7 |
| CDX76441 | Canola | cytosol | 42.17 | 42.29 |
| CDX87303 | Canola | cytosol | 21.08 | 42.29 |
| CDY31424 | Canola | cytosol | 42.17 | 42.29 |
| GSMUA_Achr7P13240_001 | Banana | cytosol, nucleus, peroxisome | 44.16 | 41.22 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plastid | 39.32 | 38.66 |
| GSMUA_Achr4P08970_001 | Banana | cytosol, nucleus, peroxisome | 40.46 | 38.59 |
| TraesCS3B01G141800.1 | Wheat | cytosol | 35.04 | 33.33 |
| Zm00001d039634_P001 | Maize | cytosol | 36.18 | 33.25 |
| TraesCS3A01G122600.1 | Wheat | cytosol | 35.04 | 33.24 |
| HORVU3Hr1G022840.8 | Barley | cytosol | 35.33 | 32.98 |
| TraesCS2A01G540400.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 34.76 | 32.97 |
| TraesCS3D01G124500.1 | Wheat | cytosol | 34.76 | 32.97 |
| Os01t0177400-01 | Rice | golgi | 34.47 | 32.7 |
| HORVU2Hr1G118350.1 | Barley | cytosol | 35.04 | 32.63 |
| TraesCS2D01G542100.1 | Wheat | cytosol | 33.9 | 31.9 |
| EES00202 | Sorghum | cytosol, peroxisome, plastid | 35.04 | 31.62 |
| TraesCS2B01G570900.1 | Wheat | cytosol | 33.62 | 31.47 |
| Os05t0178100-01 | Rice | plasma membrane | 33.9 | 31.23 |
| TraesCS2B01G570800.2 | Wheat | cytosol | 35.9 | 30.81 |
| Zm00001d037627_P001 | Maize | cytosol | 32.48 | 30.48 |
| KXG21453 | Sorghum | cytosol, peroxisome, plastid | 33.33 | 28.47 |
| Os04t0517600-00 | Rice | cytosol, peroxisome | 14.53 | 24.88 |
Protein Annotations
| MapMan:11.6.1.6 | Gene3D:2.60.120.330 | GO:A0A078HJJ6 | UniProt:A0A078HJJ6 | EnsemblPlants:CDY38660 | ProteinID:CDY38660 |
| ProteinID:CDY38660.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00066377001 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF95 | SUPFAM:SSF51197 | UniParc:UPI0004EDD4F1 | : |
Description
BnaC02g23190DBnaC02g23190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJJ6]
Coordinates
chrLK032429:-:67981..69416
Molecular Weight (calculated)
38664.3 Da
IEP (calculated)
5.982
GRAVY (calculated)
-0.109
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSITEDVSI GNLGSLQTLP DSFTWNFTAA DSLLPPSSAT VKEFIPVINL SDPDVTTLLG NACKTWGAFQ IANHGISQSL LDDVESLSKT FFDMPSERKL
101: EAASSNKGVS GYGEPRISPF FEKKMWSEGL TIADGSYRNQ FLTIWPRDYT KYCGIIEEYK GEMENLANRL LSCILGSLGV TVDDIEWAQK TEKSGSKMGR
201: GVIRLNHYPV CPEPERAMGL AAHTDSCLLT ILHQSNMGGL QVFKEESGWV TVEPIPGVLV VNIGDLFHIL SNGKFPSVVH RARVNQTKSR ISIAYLWGGP
301: AGDVKISPIS KIVGPVGPYL YRPVTWSEYL RIKFEVFDKA LDAIRVVNPT N
101: EAASSNKGVS GYGEPRISPF FEKKMWSEGL TIADGSYRNQ FLTIWPRDYT KYCGIIEEYK GEMENLANRL LSCILGSLGV TVDDIEWAQK TEKSGSKMGR
201: GVIRLNHYPV CPEPERAMGL AAHTDSCLLT ILHQSNMGGL QVFKEESGWV TVEPIPGVLV VNIGDLFHIL SNGKFPSVVH RARVNQTKSR ISIAYLWGGP
301: AGDVKISPIS KIVGPVGPYL YRPVTWSEYL RIKFEVFDKA LDAIRVVNPT N
001: MPSLAEEICI GNLGSLQTLP ESFTWKLTAA DSLLRPSSAV SFDAVEESIP VIDLSNPDVT TLIGDASKTW GAFQIANHGI SQKLLDDIES LSKTLFDMPS
101: ERKLEAASSD KGVSGYGEPR ISPFFEKKMW SEGFTIADDS YRNHFNTLWP HDHTKYCGII QEYVDEMEKL ASRLLYCILG SLGVTVEDIE WAHKLEKSGS
201: KVGRGAIRLN HYPVCPEPER AMGLAAHTDS TILTILHQSN TGGLQVFREE SGWVTVEPAP GVLVVNIGDL FHILSNGKIP SVVHRAKVNH TRSRISIAYL
301: WGGPAGDVQI APISKLTGPA EPSLYRSITW KEYLQIKYEV FDKAMDAIRV VNPTN
101: ERKLEAASSD KGVSGYGEPR ISPFFEKKMW SEGFTIADDS YRNHFNTLWP HDHTKYCGII QEYVDEMEKL ASRLLYCILG SLGVTVEDIE WAHKLEKSGS
201: KVGRGAIRLN HYPVCPEPER AMGLAAHTDS TILTILHQSN TGGLQVFREE SGWVTVEPAP GVLVVNIGDL FHILSNGKIP SVVHRAKVNH TRSRISIAYL
301: WGGPAGDVQI APISKLTGPA EPSLYRSITW KEYLQIKYEV FDKAMDAIRV VNPTN
Arabidopsis Description
GA3OX4Gibberellin 3-beta-dioxygenase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C971]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.