Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008481.1-P | Field mustard | cytosol | 97.44 | 97.44 |
| CDY38660 | Canola | cytosol | 93.16 | 93.16 |
| AT1G80330.1 | Thale cress | cytosol | 80.91 | 80.0 |
| CDX87302 | Canola | cytosol | 13.68 | 62.34 |
| CDY39663 | Canola | cytosol, nucleus, peroxisome | 55.56 | 54.32 |
| CDY36572 | Canola | cytosol, nucleus, peroxisome | 54.99 | 53.76 |
| CDY68965 | Canola | cytosol, nucleus, peroxisome | 54.7 | 53.63 |
| CDX81720 | Canola | cytosol, nucleus, peroxisome | 54.42 | 53.35 |
| CDY38661 | Canola | cytosol, nucleus, peroxisome | 52.42 | 51.4 |
| CDY37589 | Canola | cytosol, nucleus, peroxisome | 52.42 | 51.4 |
| Solyc03g119910.2.1 | Tomato | cytosol | 51.85 | 51.27 |
| VIT_09s0002g05270.t01 | Wine grape | cytosol, nucleus, peroxisome | 52.42 | 50.41 |
| CDY39986 | Canola | cytosol | 17.95 | 50.4 |
| Solyc06g066820.2.1 | Tomato | cytosol, peroxisome, plastid | 53.28 | 50.0 |
| PGSC0003DMT400014555 | Potato | cytosol | 50.71 | 50.0 |
| KRH44397 | Soybean | cytosol | 51.57 | 48.27 |
| KRH09799 | Soybean | cytosol, nucleus, peroxisome | 48.43 | 48.16 |
| PGSC0003DMT400042582 | Potato | cytosol, nucleus, peroxisome | 51.0 | 48.12 |
| KRH47509 | Soybean | cytosol | 51.28 | 47.62 |
| KRH23520 | Soybean | cytosol | 47.29 | 47.16 |
| VIT_09s0002g05300.t01 | Wine grape | cytosol | 48.15 | 47.08 |
| CDX87303 | Canola | cytosol | 21.94 | 44.0 |
| GSMUA_Achr5P09790_001 | Banana | cytosol | 46.15 | 43.78 |
| CDX76441 | Canola | cytosol | 41.88 | 42.0 |
| CDY31424 | Canola | cytosol | 41.88 | 42.0 |
| GSMUA_Achr7P13240_001 | Banana | cytosol, nucleus, peroxisome | 44.73 | 41.76 |
| GSMUA_Achr4P08970_001 | Banana | cytosol, nucleus, peroxisome | 40.46 | 38.59 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plastid | 39.03 | 38.38 |
| TraesCS3B01G141800.1 | Wheat | cytosol | 35.9 | 34.15 |
| TraesCS3A01G122600.1 | Wheat | cytosol | 35.9 | 34.05 |
| Zm00001d039634_P001 | Maize | cytosol | 37.04 | 34.03 |
| Os01t0177400-01 | Rice | golgi | 35.61 | 33.78 |
| TraesCS3D01G124500.1 | Wheat | cytosol | 35.61 | 33.78 |
| HORVU3Hr1G022840.8 | Barley | cytosol | 36.18 | 33.78 |
| TraesCS2A01G540400.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 34.47 | 32.7 |
| HORVU2Hr1G118350.1 | Barley | cytosol | 35.04 | 32.63 |
| EES00202 | Sorghum | cytosol, peroxisome, plastid | 35.9 | 32.39 |
| TraesCS2D01G542100.1 | Wheat | cytosol | 34.19 | 32.17 |
| Os05t0178100-01 | Rice | plasma membrane | 34.76 | 32.02 |
| Zm00001d037627_P001 | Maize | cytosol | 33.62 | 31.55 |
| TraesCS2B01G570800.2 | Wheat | cytosol | 36.75 | 31.54 |
| TraesCS2B01G570900.1 | Wheat | cytosol | 33.62 | 31.47 |
| KXG21453 | Sorghum | cytosol, peroxisome, plastid | 34.19 | 29.2 |
| Os04t0517600-00 | Rice | cytosol, peroxisome | 14.81 | 25.37 |
Protein Annotations
| MapMan:11.6.1.6 | Gene3D:2.60.120.330 | GO:A0A078HL48 | UniProt:A0A078HL48 | EnsemblPlants:CDY37588 | ProteinID:CDY37588 |
| ProteinID:CDY37588.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00064222001 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF95 | SUPFAM:SSF51197 | UniParc:UPI0004EDD328 | : |
Description
BnaA02g19820DBnaA02g19820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HL48]
Coordinates
chrLK032403:-:187424..188670
Molecular Weight (calculated)
38528.2 Da
IEP (calculated)
5.452
GRAVY (calculated)
-0.091
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSINEDVSI GNLGSLQTLP DSFTWKLTAA DSILPPSSAA VKESIPVIDL SDPDVTNLLG NACKTWGAFQ IANHGVSQSL LDDVESLSKT FFDMPSERKL
101: EAASSNKGVS GYGEPRISLF FEKKMWSEGL TIADGSYRNQ FLTIWPRDYT KYCGIIEEYK GEMEKLASRL LSCILGSLGV TVDDIEWAKK TEKSESKMGQ
201: SVIRLNHYPV CPEPERAMGL AAHTDSCLLT ILHQSNMGGL QVFKEESGWV TVEPIPGVLV VNIGDLFHIL SNGKFPSVVH RARVNRTKSR ISIAYLWGGP
301: AGEVEISPIS KIVGPVGPCL YRPVTWSEYL RIKFEVFDKA LDAIGVVNPT N
101: EAASSNKGVS GYGEPRISLF FEKKMWSEGL TIADGSYRNQ FLTIWPRDYT KYCGIIEEYK GEMEKLASRL LSCILGSLGV TVDDIEWAKK TEKSESKMGQ
201: SVIRLNHYPV CPEPERAMGL AAHTDSCLLT ILHQSNMGGL QVFKEESGWV TVEPIPGVLV VNIGDLFHIL SNGKFPSVVH RARVNRTKSR ISIAYLWGGP
301: AGEVEISPIS KIVGPVGPCL YRPVTWSEYL RIKFEVFDKA LDAIGVVNPT N
001: MPSLAEEICI GNLGSLQTLP ESFTWKLTAA DSLLRPSSAV SFDAVEESIP VIDLSNPDVT TLIGDASKTW GAFQIANHGI SQKLLDDIES LSKTLFDMPS
101: ERKLEAASSD KGVSGYGEPR ISPFFEKKMW SEGFTIADDS YRNHFNTLWP HDHTKYCGII QEYVDEMEKL ASRLLYCILG SLGVTVEDIE WAHKLEKSGS
201: KVGRGAIRLN HYPVCPEPER AMGLAAHTDS TILTILHQSN TGGLQVFREE SGWVTVEPAP GVLVVNIGDL FHILSNGKIP SVVHRAKVNH TRSRISIAYL
301: WGGPAGDVQI APISKLTGPA EPSLYRSITW KEYLQIKYEV FDKAMDAIRV VNPTN
101: ERKLEAASSD KGVSGYGEPR ISPFFEKKMW SEGFTIADDS YRNHFNTLWP HDHTKYCGII QEYVDEMEKL ASRLLYCILG SLGVTVEDIE WAHKLEKSGS
201: KVGRGAIRLN HYPVCPEPER AMGLAAHTDS TILTILHQSN TGGLQVFREE SGWVTVEPAP GVLVVNIGDL FHILSNGKIP SVVHRAKVNH TRSRISIAYL
301: WGGPAGDVQI APISKLTGPA EPSLYRSITW KEYLQIKYEV FDKAMDAIRV VNPTN
Arabidopsis Description
GA3OX4Gibberellin 3-beta-dioxygenase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C971]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.