Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g119910.2.1 | Tomato | cytosol | 91.29 | 91.55 |
| PGSC0003DMT400042582 | Potato | cytosol, nucleus, peroxisome | 74.72 | 71.51 |
| VIT_09s0002g05270.t01 | Wine grape | cytosol, nucleus, peroxisome | 67.98 | 66.3 |
| CDX87302 | Canola | cytosol | 14.04 | 64.94 |
| KRH09799 | Soybean | cytosol, nucleus, peroxisome | 62.92 | 63.46 |
| KRH23520 | Soybean | cytosol | 61.8 | 62.5 |
| CDY39986 | Canola | cytosol | 20.51 | 58.4 |
| KRH44397 | Soybean | cytosol | 60.11 | 57.07 |
| KRH47509 | Soybean | cytosol | 59.83 | 56.35 |
| Bra026757.1-P | Field mustard | cytosol, nucleus, peroxisome | 56.46 | 56.15 |
| CDY68965 | Canola | cytosol, nucleus, peroxisome | 56.46 | 56.15 |
| Bra026122.1-P | Field mustard | cytosol, nucleus, peroxisome | 56.46 | 55.99 |
| CDY39663 | Canola | cytosol, nucleus, peroxisome | 56.46 | 55.99 |
| CDY36572 | Canola | cytosol, nucleus, peroxisome | 56.18 | 55.71 |
| CDX81720 | Canola | cytosol, nucleus, peroxisome | 55.9 | 55.59 |
| VIT_09s0002g05300.t01 | Wine grape | cytosol | 55.62 | 55.15 |
| AT1G15550.1 | Thale cress | cytosol, nucleus, peroxisome | 55.34 | 55.03 |
| AT1G80340.1 | Thale cress | cytosol | 52.53 | 53.89 |
| CDY38661 | Canola | cytosol, nucleus, peroxisome | 53.09 | 52.79 |
| CDY37589 | Canola | cytosol, nucleus, peroxisome | 53.09 | 52.79 |
| Bra008480.1-P | Field mustard | cytosol, nucleus, peroxisome | 53.09 | 52.79 |
| AT1G80330.1 | Thale cress | cytosol | 52.25 | 52.39 |
| Bra008481.1-P | Field mustard | cytosol | 50.28 | 51.0 |
| CDY37588 | Canola | cytosol, nucleus, peroxisome | 50.0 | 50.71 |
| CDY38660 | Canola | cytosol | 50.0 | 50.71 |
| GSMUA_Achr5P09790_001 | Banana | cytosol | 51.97 | 50.0 |
| GSMUA_Achr4P08970_001 | Banana | cytosol, nucleus, peroxisome | 50.0 | 48.37 |
| GSMUA_Achr7P13240_001 | Banana | cytosol, nucleus, peroxisome | 50.0 | 47.34 |
| PGSC0003DMT400074744 | Potato | cytosol | 44.38 | 45.27 |
| PGSC0003DMT400059595 | Potato | cytosol | 44.1 | 44.99 |
| CDX87303 | Canola | cytosol | 21.91 | 44.57 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plastid | 44.1 | 43.98 |
| PGSC0003DMT400086139 | Potato | cytosol | 42.7 | 43.55 |
| Os01t0177400-01 | Rice | golgi | 40.17 | 38.65 |
| Zm00001d039634_P001 | Maize | cytosol | 39.89 | 37.17 |
| TraesCS3B01G141800.1 | Wheat | cytosol | 38.48 | 37.13 |
| TraesCS3A01G122600.1 | Wheat | cytosol | 38.2 | 36.76 |
| TraesCS3D01G124500.1 | Wheat | cytosol | 38.2 | 36.76 |
| PGSC0003DMT400044153 | Potato | nucleus | 30.34 | 36.73 |
| HORVU3Hr1G022840.8 | Barley | cytosol | 38.2 | 36.17 |
| EES00202 | Sorghum | cytosol, peroxisome, plastid | 39.33 | 35.99 |
| TraesCS2D01G542100.1 | Wheat | cytosol | 37.08 | 35.39 |
| HORVU2Hr1G118350.1 | Barley | cytosol | 37.08 | 35.01 |
| TraesCS2A01G540400.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 36.24 | 34.86 |
| TraesCS2B01G570900.1 | Wheat | cytosol | 35.96 | 34.13 |
| Zm00001d037627_P001 | Maize | cytosol | 34.55 | 32.89 |
| KXG21453 | Sorghum | cytosol, peroxisome, plastid | 36.52 | 31.63 |
| TraesCS2B01G570800.2 | Wheat | cytosol | 36.24 | 31.54 |
| Os05t0178100-01 | Rice | plasma membrane | 33.71 | 31.5 |
| Os04t0517600-00 | Rice | cytosol, peroxisome | 14.61 | 25.37 |
Protein Annotations
| EntrezGene:102582924 | MapMan:11.6.1.6 | Gene3D:2.60.120.330 | ProteinID:AAK91506 | ProteinID:AAK91506.1 | EMBL:AY039110 |
| ncoils:Coil | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | UniProt:M1A4G2 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | EnsemblPlantsGene:PGSC0003DMG400005698 |
| PGSC:PGSC0003DMG400005698 | EnsemblPlants:PGSC0003DMT400014555 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF95 | SUPFAM:SSF51197 |
| UniParc:UPI0002969C67 | RefSeq:XP_006341659.1 | SEG:seg | : | : | : |
Description
Gibberellin 3-oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400005698]
Coordinates
chr3:+:59335795..59337223
Molecular Weight (calculated)
39411.3 Da
IEP (calculated)
8.285
GRAVY (calculated)
-0.215
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSIISSEKQ LDLYSIKELP ESHAWRSSLD DDGSRNINVE SIPVIDLNDD KFAIDRIGHA CKTWGAFQII NHNISQRLLN DMETCGTRLF SLPMQQKLKA
101: ARSSDGIAGY GVARISSFFS KLMWSEGFTI FGSPLEHARQ LWPHNYNKFC DVIEEYENEM EKLAGRLMGL MLGSLGITKE DVKWAVGPRS GCSALQLNSY
201: PACPDPDRAM GLAAHTDSTI LTILHQNNTS GLQVFREGNG WVTVPPLCGA LVINVGDLLH ILSNGLYPSV LHRAVVNRTR HRLSVAYLYG PPSGVKISPL
301: SKLVDQRNPP MYRPVTWSEY LGTKAKHFDK ALSSVRLCAP RIGFANSKDQ SGVQVG
101: ARSSDGIAGY GVARISSFFS KLMWSEGFTI FGSPLEHARQ LWPHNYNKFC DVIEEYENEM EKLAGRLMGL MLGSLGITKE DVKWAVGPRS GCSALQLNSY
201: PACPDPDRAM GLAAHTDSTI LTILHQNNTS GLQVFREGNG WVTVPPLCGA LVINVGDLLH ILSNGLYPSV LHRAVVNRTR HRLSVAYLYG PPSGVKISPL
301: SKLVDQRNPP MYRPVTWSEY LGTKAKHFDK ALSSVRLCAP RIGFANSKDQ SGVQVG
001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE
Arabidopsis Description
GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.