Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87302 | Canola | cytosol | 19.6 | 88.31 |
| CDY39986 | Canola | cytosol | 31.7 | 88.0 |
| CDY38661 | Canola | cytosol, nucleus, peroxisome | 89.63 | 86.87 |
| CDY37589 | Canola | cytosol, nucleus, peroxisome | 88.76 | 86.03 |
| Bra008480.1-P | Field mustard | cytosol, nucleus, peroxisome | 87.32 | 84.64 |
| AT1G15550.1 | Thale cress | cytosol, nucleus, peroxisome | 72.62 | 70.39 |
| CDX87303 | Canola | cytosol | 34.58 | 68.57 |
| KRH09799 | Soybean | cytosol, nucleus, peroxisome | 55.62 | 54.67 |
| KRH23520 | Soybean | cytosol | 54.47 | 53.69 |
| VIT_09s0002g05270.t01 | Wine grape | cytosol, nucleus, peroxisome | 55.91 | 53.15 |
| Solyc03g119910.2.1 | Tomato | cytosol | 53.89 | 52.68 |
| AT1G80330.1 | Thale cress | cytosol | 53.89 | 52.68 |
| PGSC0003DMT400014555 | Potato | cytosol | 53.89 | 52.53 |
| KRH44397 | Soybean | cytosol | 55.91 | 51.73 |
| VIT_09s0002g05300.t01 | Wine grape | cytosol | 52.74 | 50.97 |
| PGSC0003DMT400042582 | Potato | cytosol, nucleus, peroxisome | 54.47 | 50.81 |
| Solyc06g066820.2.1 | Tomato | cytosol, peroxisome, plastid | 54.47 | 50.53 |
| KRH47509 | Soybean | cytosol | 54.18 | 49.74 |
| GSMUA_Achr5P09790_001 | Banana | cytosol | 47.84 | 44.86 |
| GSMUA_Achr7P13240_001 | Banana | cytosol, nucleus, peroxisome | 48.13 | 44.41 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plastid | 42.36 | 41.18 |
| AT4G21690.1 | Thale cress | cytosol | 41.21 | 40.97 |
| GSMUA_Achr4P08970_001 | Banana | cytosol, nucleus, peroxisome | 42.36 | 39.95 |
| TraesCS3A01G122600.1 | Wheat | cytosol | 37.46 | 35.14 |
| Os01t0177400-01 | Rice | golgi | 37.18 | 34.86 |
| Zm00001d039634_P001 | Maize | cytosol | 38.04 | 34.55 |
| TraesCS3B01G141800.1 | Wheat | cytosol | 36.6 | 34.42 |
| TraesCS3D01G124500.1 | Wheat | cytosol | 36.02 | 33.78 |
| HORVU3Hr1G022840.8 | Barley | cytosol | 36.31 | 33.51 |
| EES00202 | Sorghum | cytosol, peroxisome, plastid | 37.18 | 33.16 |
| TraesCS2A01G540400.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 35.16 | 32.97 |
| HORVU2Hr1G118350.1 | Barley | cytosol | 34.87 | 32.1 |
| TraesCS2D01G542100.1 | Wheat | cytosol | 34.01 | 31.64 |
| Os05t0178100-01 | Rice | plasma membrane | 34.01 | 30.97 |
| TraesCS2B01G570900.1 | Wheat | cytosol | 33.14 | 30.67 |
| TraesCS2B01G570800.2 | Wheat | cytosol | 35.73 | 30.32 |
| Zm00001d037627_P001 | Maize | cytosol | 31.7 | 29.41 |
| KXG21453 | Sorghum | cytosol, peroxisome, plastid | 32.28 | 27.25 |
| Os04t0517600-00 | Rice | cytosol, peroxisome | 13.83 | 23.41 |
Protein Annotations
| MapMan:11.6.1.6 | Gene3D:2.60.120.330 | EntrezGene:844374 | ProteinID:AAG52442.1 | ProteinID:AEE36389.1 | EMBL:AF070937 |
| ArrayExpress:AT1G80340 | EnsemblPlantsGene:AT1G80340 | RefSeq:AT1G80340 | TAIR:AT1G80340 | RefSeq:AT1G80340-TAIR-G | EnsemblPlants:AT1G80340.1 |
| TAIR:AT1G80340.1 | InterPro:DIOX_N | Symbol:GA4H | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0006629 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009628 | GO:GO:0009639 | GO:GO:0009686 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009987 |
| GO:GO:0010114 | GO:GO:0016491 | GO:GO:0016707 | GO:GO:0046872 | GO:GO:0051213 | GO:GO:0055114 |
| InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | RefSeq:NP_178150.1 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 |
| PFAM:PF14226 | PO:PO:0000026 | PO:PO:0000048 | PO:PO:0004723 | PO:PO:0006081 | PO:PO:0007131 |
| PO:PO:0009005 | PO:PO:0009047 | PO:PO:0009066 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020130 |
| PO:PO:0020149 | PO:PO:0025257 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF95 | UniProt:Q9ZT84 |
| SUPFAM:SSF51197 | UniParc:UPI00000484C6 | : | : | : | : |
Description
GA3OX2Gibberellin 3-beta-dioxygenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT84]
Coordinates
chr1:-:30200466..30202349
Molecular Weight (calculated)
38784.5 Da
IEP (calculated)
7.080
GRAVY (calculated)
-0.125
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTLSDVFR SHPIHIPLSN PPDFKSLPDS YTWTPKDDLL FSASASDETL PLIDLSDIHV ATLVGHACTT WGAFQITNHG VPSRLLDDIE FLTGSLFRLP
101: VQRKLKAARS ENGVSGYGVA RIASFFNKKM WSEGFTVIGS PLHDFRKLWP SHHLKYCEII EEYEEHMQKL AAKLMWFALG SLGVEEKDIQ WAGPNSDFQG
201: TQAVIQLNHY PKCPEPDRAM GLAAHTDSTL MTILYQNNTA GLQVFRDDVG WVTAPPVPGS LVVNVGDLLH ILTNGIFPSV LHRARVNHVR SRFSMAYLWG
301: PPSDIMISPL PKLVDPLQSP LYPSLTWKQY LATKATHFNQ SLSIIRN
101: VQRKLKAARS ENGVSGYGVA RIASFFNKKM WSEGFTVIGS PLHDFRKLWP SHHLKYCEII EEYEEHMQKL AAKLMWFALG SLGVEEKDIQ WAGPNSDFQG
201: TQAVIQLNHY PKCPEPDRAM GLAAHTDSTL MTILYQNNTA GLQVFRDDVG WVTAPPVPGS LVVNVGDLLH ILTNGIFPSV LHRARVNHVR SRFSMAYLWG
301: PPSDIMISPL PKLVDPLQSP LYPSLTWKQY LATKATHFNQ SLSIIRN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.