Factsheet for TraesCS3B01G141800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G124500.1	Wheat	cytosol	94.04	93.78
TraesCS3A01G122600.1	Wheat	cytosol	92.68	92.43
HORVU3Hr1G022840.8	Barley	cytosol	93.5	91.76
Zm00001d039634_P001	Maize	cytosol	79.4	76.7
Os01t0177400-01	Rice	golgi	73.98	73.78
EES00202	Sorghum	cytosol, peroxisome, plastid	77.24	73.26
TraesCS2B01G570900.1	Wheat	cytosol	65.85	64.8
TraesCS2B01G570800.2	Wheat	cytosol	69.65	62.84
CDX87302	Canola	cytosol	10.84	51.95
GSMUA_Achr5P09790_001	Banana	cytosol	43.63	43.51
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	42.82	42.02
VIT_04s0008g04940.t01	Wine grape	cytosol, peroxisome, plastid	39.02	40.56
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	39.02	40.34
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	39.57	40.0
VIT_09s0002g05300.t01	Wine grape	cytosol	38.75	39.83
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	39.57	39.67
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	39.57	39.04
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	39.3	38.98
Solyc03g119910.2.1	Tomato	cytosol	37.13	38.59
PGSC0003DMT400014555	Potato	cytosol	37.13	38.48
CDY39986	Canola	cytosol	13.01	38.4
KRH61843	Soybean	cytosol, peroxisome, plastid	34.69	37.54
AT1G15550.1	Thale cress	cytosol, nucleus, peroxisome	36.31	37.43
KRH09799	Soybean	cytosol, nucleus, peroxisome	35.77	37.39
CDY39663	Canola	cytosol, nucleus, peroxisome	36.31	37.33
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	36.31	37.33
CDY68965	Canola	cytosol, nucleus, peroxisome	36.04	37.15
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	36.04	37.15
KRH05073	Soybean	cytosol	35.23	37.14
CDY36572	Canola	cytosol, nucleus, peroxisome	36.04	37.05
KRH23520	Soybean	cytosol	35.23	36.93
CDX81720	Canola	cytosol, nucleus, peroxisome	35.77	36.87
AT1G80340.1	Thale cress	cytosol	34.42	36.6
CDY37589	Canola	cytosol, nucleus, peroxisome	35.5	36.59
CDY38661	Canola	cytosol, nucleus, peroxisome	35.23	36.31
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	35.23	36.31
KRH52518	Soybean	cytosol	34.15	36.31
KRH44397	Soybean	cytosol	36.59	36.0
CDY37588	Canola	cytosol, nucleus, peroxisome	34.15	35.9
Bra008481.1-P	Field mustard	cytosol	33.88	35.61
PGSC0003DMT400059595	Potato	cytosol	33.6	35.53
KRH47509	Soybean	cytosol	36.31	35.45
KRH16040	Soybean	cytosol	33.33	35.45
Solyc01g058250.1.1	Tomato	cytosol	33.06	35.06
CDY38660	Canola	cytosol	33.33	35.04
PGSC0003DMT400074744	Potato	cytosol	32.52	34.38
CDY31424	Canola	cytosol	32.52	34.29
Bra020909.1-P	Field mustard	cytosol	32.52	34.29
PGSC0003DMT400086139	Potato	cytosol	32.25	34.1
AT1G80330.1	Thale cress	cytosol	32.79	34.08
CDX76441	Canola	cytosol	31.98	33.71
Solyc05g052740.1.1	Tomato	cytosol	31.71	33.52
AT4G21690.1	Thale cress	cytosol	30.62	32.38
PGSC0003DMT400044153	Potato	nucleus	25.75	32.31
CDX87303	Canola	cytosol	14.36	30.29

Protein Annotations

EnsemblPlants:TraesCS3B01G141800.1	EnsemblPlantsGene:TraesCS3B01G141800	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF245	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SUPFAM:SSF51197	MapMan:11.6.1.6	:	:	:

Description

No Description!

Coordinates

chr3B:+:128948333..128949833

Molecular Weight (calculated)

40286.4 Da

IEP (calculated)

6.927

GRAVY (calculated)

-0.045

Length

369 amino acids

Sequence
(BLAST)

001: MPTPAHLSKD PHYFDFRAAR RVPETHAWPG LHDHPVVDGS GAGGDPDAVP VVDMRDPFAA EAVGLAAQDW GAFLLVGHGV PLDLLARVEA AIAGMFALPA
101: SEKMRAVRRP GDSCGYGSPP ISSFFSKCMW SEGYTFSPAN LRSDLRKLWP KAGHDYRHFC AVMEEFHREM RALADKLLEL FLVALGLTGE QVAAVESEQK
201: IAETMTATMH LNWYPKCPDP KRALGLIAHT DSGFFTFVLQ SLVPGLQLFR HGPDRWVTVP AVPGAMVVNV GDLFQILTNG RFHSVYHRAV VNRESDRISL
301: GYFLGPPAHV KVAPLREALA GTPAAYRAVT WPEYMGVRKK AFTTGASALK MVAISTDDAA NDTDDLILS

Best Arabidopsis Sequence Match ( AT1G15550.1 )
(BLAST)

001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE

Arabidopsis Description

GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.