CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47509	Soybean	cytosol	92.0	91.27
KRH09799	Soybean	cytosol, nucleus, peroxisome	67.73	71.95
KRH23520	Soybean	cytosol	66.67	71.02
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	61.6	63.29
CDX87302	Canola	cytosol	12.8	62.34
Solyc03g119910.2.1	Tomato	cytosol	57.87	61.13
PGSC0003DMT400014555	Potato	cytosol	57.07	60.11
CDY39663	Canola	cytosol, nucleus, peroxisome	56.53	59.05
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	56.27	58.77
AT1G15550.1	Thale cress	cytosol, nucleus, peroxisome	56.0	58.66
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	58.4	58.56
CDY36572	Canola	cytosol, nucleus, peroxisome	56.0	58.5
CDX81720	Canola	cytosol, nucleus, peroxisome	55.73	58.38
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	55.47	58.1
CDY68965	Canola	cytosol, nucleus, peroxisome	55.47	58.1
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	57.6	58.06
VIT_09s0002g05300.t01	Wine grape	cytosol	54.67	57.1
CDY39986	Canola	cytosol	18.93	56.8
AT1G80340.1	Thale cress	cytosol	51.73	55.91
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	53.33	55.87
CDY38661	Canola	cytosol, nucleus, peroxisome	53.07	55.59
CDY37589	Canola	cytosol, nucleus, peroxisome	52.8	55.31
Bra008481.1-P	Field mustard	cytosol	48.8	52.14
CDY37588	Canola	cytosol, nucleus, peroxisome	48.27	51.57
CDX87303	Canola	cytosol	24.0	51.43
CDY38660	Canola	cytosol	47.73	51.0
AT1G80330.1	Thale cress	cytosol	48.0	50.7
KRH61843	Soybean	cytosol, peroxisome, plastid	45.6	50.15
GSMUA_Achr5P09790_001	Banana	cytosol	49.33	50.0
KRH05073	Soybean	cytosol	46.13	49.43
KRH16040	Soybean	cytosol	45.07	48.7
KRH52518	Soybean	cytosol	44.8	48.41
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	46.4	46.28
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	41.87	43.98
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	42.93	43.75
Zm00001d039634_P001	Maize	cytosol	37.33	36.65
TraesCS3B01G141800.1	Wheat	cytosol	36.0	36.59
Os01t0177400-01	Rice	golgi	36.0	36.49
TraesCS3D01G124500.1	Wheat	cytosol	35.73	36.22
TraesCS3A01G122600.1	Wheat	cytosol	35.47	35.95
HORVU3Hr1G022840.8	Barley	cytosol	35.47	35.37
TraesCS2A01G540400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	34.13	34.59
EES00202	Sorghum	cytosol, peroxisome, plastid	35.2	33.93
TraesCS2D01G542100.1	Wheat	cytosol	33.6	33.78
TraesCS2B01G570900.1	Wheat	cytosol	33.33	33.33
HORVU2Hr1G118350.1	Barley	cytosol	32.53	32.36
Zm00001d037627_P001	Maize	cytosol	32.27	32.35
Os05t0178100-01	Rice	plasma membrane	32.0	31.5
TraesCS2B01G570800.2	Wheat	cytosol	33.33	30.56
KXG21453	Sorghum	cytosol, peroxisome, plastid	32.27	29.44
Os04t0517600-00	Rice	cytosol, peroxisome	13.87	25.37

Protein Annotations

EntrezGene:100794180	MapMan:11.6.1.6	Gene3D:2.60.120.330	EMBL:ACUP02004928	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_08G208300
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009416	GO:GO:0009628	GO:GO:0009686
GO:GO:0009719	GO:GO:0009740	GO:GO:0009987	GO:GO:0016491	GO:GO:0016707	GO:GO:0046872
GO:GO:0055114	UniProt:I1KVA1	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KRH44397
ProteinID:KRH44397	ProteinID:KRH44397.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF95	SUPFAM:SSF51197	UniParc:UPI0002337E48	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:16875101..16877234

Molecular Weight (calculated)

41672.0 Da

IEP (calculated)

8.357

GRAVY (calculated)

-0.190

Length

375 amino acids

Sequence
(BLAST)

001: MPSLSEAFRG HPVYLHQKHH DFNSLQELPD SYAWTQPDDD DHRLTNYPSN NKTKTVVPII DLNDPNAPNL IGHACKTWGV FQVVNHGIPT SLFSDIQRAS
101: LALFSLPLHQ KLKAARSPDG VSGYGRARIS SFFPKLMWSE CFTILDSPLD LFLKLWPQDY AKYCDIVVEY EAAMKKLAAK LMCLMLASLG IPKEDIKWAG
201: PKGEFNGACA ALHWNSYPSC PDPDRAMGLA AHTDSTLLTI LHQNNVNGLQ VLKEGEGWVA VPPLPGGLVI NVGDLLHILS NGLYPSVLHR VRVNRTRQRF
301: SVAYLYGPPT NVQISPQVKL VGPTRPVLYR SVTWNEYLGT KAKLFNKALS AVRLSSSING LFDVNEDKSN DFQVG

Best Arabidopsis Sequence Match ( AT1G15550.1 )
(BLAST)

001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE

Arabidopsis Description

GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.