Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P08970_001 | Banana | cytosol, nucleus, peroxisome | 57.84 | 58.15 |
| CDX87302 | Canola | cytosol | 11.08 | 53.25 |
| GSMUA_Achr7P13240_001 | Banana | cytosol, nucleus, peroxisome | 53.51 | 52.66 |
| Solyc03g119910.2.1 | Tomato | cytosol | 50.0 | 52.11 |
| PGSC0003DMT400014555 | Potato | cytosol | 50.0 | 51.97 |
| KRH23520 | Soybean | cytosol | 48.92 | 51.42 |
| KRH09799 | Soybean | cytosol, nucleus, peroxisome | 48.92 | 51.27 |
| VIT_09s0002g05270.t01 | Wine grape | cytosol, nucleus, peroxisome | 50.54 | 51.23 |
| Solyc06g066820.2.1 | Tomato | cytosol, peroxisome, plastid | 51.35 | 50.8 |
| PGSC0003DMT400042582 | Potato | cytosol, nucleus, peroxisome | 50.81 | 50.54 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plastid | 48.11 | 49.86 |
| KRH44397 | Soybean | cytosol | 50.0 | 49.33 |
| AT1G15550.1 | Thale cress | cytosol, nucleus, peroxisome | 47.57 | 49.16 |
| KRH47509 | Soybean | cytosol | 50.0 | 48.94 |
| VIT_09s0002g05300.t01 | Wine grape | cytosol | 47.3 | 48.75 |
| Bra026757.1-P | Field mustard | cytosol, nucleus, peroxisome | 47.03 | 48.6 |
| CDY68965 | Canola | cytosol, nucleus, peroxisome | 47.03 | 48.6 |
| VIT_04s0008g04940.t01 | Wine grape | cytosol, peroxisome, plastid | 46.49 | 48.45 |
| CDX81720 | Canola | cytosol, nucleus, peroxisome | 46.76 | 48.32 |
| Bra026122.1-P | Field mustard | cytosol, nucleus, peroxisome | 46.76 | 48.19 |
| CDY39663 | Canola | cytosol, nucleus, peroxisome | 46.76 | 48.19 |
| CDY36572 | Canola | cytosol, nucleus, peroxisome | 46.49 | 47.91 |
| AT1G80340.1 | Thale cress | cytosol | 44.86 | 47.84 |
| Bra008480.1-P | Field mustard | cytosol, nucleus, peroxisome | 45.14 | 46.65 |
| Bra008481.1-P | Field mustard | cytosol | 44.05 | 46.44 |
| CDY37588 | Canola | cytosol, nucleus, peroxisome | 43.78 | 46.15 |
| CDY37589 | Canola | cytosol, nucleus, peroxisome | 44.59 | 46.09 |
| CDY38661 | Canola | cytosol, nucleus, peroxisome | 44.32 | 45.81 |
| Bra020909.1-P | Field mustard | cytosol | 42.7 | 45.14 |
| CDY38660 | Canola | cytosol | 42.7 | 45.01 |
| KRH61843 | Soybean | cytosol, peroxisome, plastid | 41.35 | 44.87 |
| CDY39986 | Canola | cytosol | 15.14 | 44.8 |
| KRH16040 | Soybean | cytosol | 41.89 | 44.67 |
| CDY31424 | Canola | cytosol | 42.16 | 44.57 |
| KRH05073 | Soybean | cytosol | 41.89 | 44.29 |
| TraesCS3D01G124500.1 | Wheat | cytosol | 44.05 | 44.05 |
| CDX76441 | Canola | cytosol | 41.62 | 44.0 |
| AT1G80330.1 | Thale cress | cytosol | 41.89 | 43.66 |
| TraesCS3B01G141800.1 | Wheat | cytosol | 43.51 | 43.63 |
| AT4G21690.1 | Thale cress | cytosol | 41.08 | 43.55 |
| KRH52518 | Soybean | cytosol | 40.81 | 43.52 |
| TraesCS3A01G122600.1 | Wheat | cytosol | 43.51 | 43.51 |
| Os01t0177400-01 | Rice | golgi | 42.97 | 42.97 |
| HORVU3Hr1G022840.8 | Barley | cytosol | 43.51 | 42.82 |
| Solyc01g058250.1.1 | Tomato | cytosol | 40.27 | 42.82 |
| Zm00001d039634_P001 | Maize | cytosol | 44.05 | 42.67 |
| CDX87303 | Canola | cytosol | 20.0 | 42.29 |
| TraesCS2A01G540400.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 41.89 | 41.89 |
| Solyc05g052740.1.1 | Tomato | cytosol | 39.46 | 41.83 |
| PGSC0003DMT400074744 | Potato | cytosol | 39.46 | 41.83 |
| PGSC0003DMT400059595 | Potato | cytosol | 39.46 | 41.83 |
| EES00202 | Sorghum | cytosol, peroxisome, plastid | 43.78 | 41.65 |
| PGSC0003DMT400086139 | Potato | cytosol | 39.19 | 41.55 |
| TraesCS2B01G570900.1 | Wheat | cytosol | 41.35 | 40.8 |
| TraesCS2D01G542100.1 | Wheat | cytosol | 40.81 | 40.48 |
| HORVU2Hr1G118350.1 | Barley | cytosol | 40.81 | 40.05 |
| TraesCS2B01G570800.2 | Wheat | cytosol | 43.24 | 39.12 |
| Os05t0178100-01 | Rice | plasma membrane | 39.73 | 38.58 |
| Zm00001d037627_P001 | Maize | cytosol | 38.65 | 38.24 |
| PGSC0003DMT400044153 | Potato | nucleus | 29.46 | 37.07 |
| KXG21453 | Sorghum | cytosol, peroxisome, plastid | 39.73 | 35.77 |
| Os04t0517600-00 | Rice | cytosol, peroxisome | 14.32 | 25.85 |
Protein Annotations
| MapMan:11.6.1.6 | Gene3D:2.60.120.330 | ncoils:Coil | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 |
| EnsemblPlantsGene:GSMUA_Achr5G09790_001 | EnsemblPlants:GSMUA_Achr5P09790_001 | EnsemblPlants:GSMUA_Achr5T09790_001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 |
| UniProt:M0SX58 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 |
| PANTHER:PTHR10209:SF95 | SUPFAM:SSF51197 | UniParc:UPI000295E291 | SEG:seg | : | : |
Description
Gibberellin 3-beta-dioxygenase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G09790_001]
Coordinates
chr5:+:7004255..7005466
Molecular Weight (calculated)
40135.2 Da
IEP (calculated)
6.447
GRAVY (calculated)
-0.071
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMPTASELI RHHHAHPLDF ESVREVPDSH AWPDLHDHPT ASAQGAVVPV IDLSATATNV LEQLARACES WGAFQVTGHG VPPGLLRRVE AAARGVFALP
101: TNRKLEAARP ADGVSGYGRA RISCFFPKLM WSEGFTIAGS PVDHARTLWP DDDALAFCDV IEEYKEEMKQ LARKLMRMML MSLGLTEAEA EAETETGWIG
201: PGDEAGGMSA VLQLNSYPVC PDPDRAMGMA AHTDSTLLTL LFQSNTSGLQ VLQVVGDTGR DRAARWVTVP PMPGALIVNV GDLFQILSNG RYRSVIHRAV
301: VNRTSHRVSV AYMCGPPAAS KVEPIVKLVG PGSGPVYRPV TWPEYLSVKG KLFDKALASV MRTEVSLEHT
101: TNRKLEAARP ADGVSGYGRA RISCFFPKLM WSEGFTIAGS PVDHARTLWP DDDALAFCDV IEEYKEEMKQ LARKLMRMML MSLGLTEAEA EAETETGWIG
201: PGDEAGGMSA VLQLNSYPVC PDPDRAMGMA AHTDSTLLTL LFQSNTSGLQ VLQVVGDTGR DRAARWVTVP PMPGALIVNV GDLFQILSNG RYRSVIHRAV
301: VNRTSHRVSV AYMCGPPAAS KVEPIVKLVG PGSGPVYRPV TWPEYLSVKG KLFDKALASV MRTEVSLEHT
001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE
Arabidopsis Description
GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.