Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400086139 | Potato | cytosol | 88.83 | 88.83 |
| PGSC0003DMT400074744 | Potato | cytosol | 83.95 | 83.95 |
| PGSC0003DMT400044153 | Potato | nucleus | 66.76 | 79.25 |
| VIT_04s0008g04940.t01 | Wine grape | cytosol, peroxisome, plastid | 53.87 | 52.96 |
| KRH05073 | Soybean | cytosol | 47.28 | 47.14 |
| KRH61843 | Soybean | cytosol, peroxisome, plastid | 45.85 | 46.92 |
| KRH16040 | Soybean | cytosol | 45.85 | 46.11 |
| KRH52518 | Soybean | cytosol | 45.56 | 45.82 |
| PGSC0003DMT400014555 | Potato | cytosol | 44.99 | 44.1 |
| PGSC0003DMT400042582 | Potato | cytosol, nucleus, peroxisome | 45.56 | 42.74 |
| CDY31424 | Canola | cytosol | 42.12 | 42.0 |
| Bra020909.1-P | Field mustard | cytosol | 41.55 | 41.43 |
| CDX76441 | Canola | cytosol | 41.26 | 41.14 |
| AT4G21690.1 | Thale cress | cytosol | 40.97 | 40.97 |
| GSMUA_Achr5P09790_001 | Banana | cytosol | 41.83 | 39.46 |
| GSMUA_Achr7P13240_001 | Banana | cytosol, nucleus, peroxisome | 42.41 | 39.36 |
| GSMUA_Achr4P08970_001 | Banana | cytosol, nucleus, peroxisome | 40.11 | 38.04 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plastid | 38.11 | 37.25 |
| Os01t0177400-01 | Rice | golgi | 36.1 | 34.05 |
| Zm00001d039634_P001 | Maize | cytosol | 36.96 | 33.77 |
| TraesCS3B01G141800.1 | Wheat | cytosol | 35.53 | 33.6 |
| TraesCS3A01G122600.1 | Wheat | cytosol | 35.53 | 33.51 |
| TraesCS3D01G124500.1 | Wheat | cytosol | 34.96 | 32.97 |
| HORVU3Hr1G022840.8 | Barley | cytosol | 35.24 | 32.71 |
| EES00202 | Sorghum | cytosol, peroxisome, plastid | 36.1 | 32.39 |
| TraesCS2A01G540400.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 32.95 | 31.08 |
| Os05t0178100-01 | Rice | plasma membrane | 33.24 | 30.45 |
| TraesCS2D01G542100.1 | Wheat | cytosol | 32.38 | 30.29 |
| TraesCS2B01G570900.1 | Wheat | cytosol | 32.38 | 30.13 |
| HORVU2Hr1G118350.1 | Barley | cytosol | 32.09 | 29.71 |
| Zm00001d037627_P001 | Maize | cytosol | 31.52 | 29.41 |
| TraesCS2B01G570800.2 | Wheat | cytosol | 32.95 | 28.12 |
| KXG21453 | Sorghum | cytosol, peroxisome, plastid | 30.95 | 26.28 |
| Os04t0517600-00 | Rice | cytosol, peroxisome | 10.6 | 18.05 |
Protein Annotations
| EntrezGene:102586814 | MapMan:11.6.1.6 | Gene3D:2.60.120.330 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 |
| InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | UniProt:M1C4G2 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 |
| PFAM:PF14226 | EnsemblPlantsGene:PGSC0003DMG400023158 | PGSC:PGSC0003DMG400023158 | EnsemblPlants:PGSC0003DMT400059595 | PFscan:PS51471 | PANTHER:PTHR10209 |
| PANTHER:PTHR10209:SF197 | SUPFAM:SSF51197 | UniParc:UPI000296867A | RefSeq:XP_006366661.1 | : | : |
Description
Gibberellin 3beta-hydroxylase3 [Source:PGSC_GENE;Acc:PGSC0003DMG400023158]
Coordinates
chr2:-:18952133..18953442
Molecular Weight (calculated)
39563.6 Da
IEP (calculated)
7.137
GRAVY (calculated)
-0.192
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTSTLEES FKENPQSLQH ILPIDFHSIQ EVPNSHLWPD INNSPISHDE KNPNVPMIDL LAPNVVELIG HACKTWGIFQ VVNHGVSLEL FDEVESQARR
101: LFALPAEQKV KVVRSTSGAT GYGTARITPF FSKFMWHEGF TIMDSPLDHA KKLWPHDYQK ICEVMENYQK KMKALSFQLW LLILNYLQPS QEHSIKSFES
201: TGALQLNSYP CCPNPNHALG LAPHTDSLFL TILHQTNNTK GLQILKKNQV WTSIAPVSND ALIVNVGDLL HILSNGEFPS VYHRVLVDQT KHRVSLAYFF
301: GPQVDSMIVP LVSSEDNVGA IPKYRNVKVK EYLDLKAKHL EKVFSMIRF
101: LFALPAEQKV KVVRSTSGAT GYGTARITPF FSKFMWHEGF TIMDSPLDHA KKLWPHDYQK ICEVMENYQK KMKALSFQLW LLILNYLQPS QEHSIKSFES
201: TGALQLNSYP CCPNPNHALG LAPHTDSLFL TILHQTNNTK GLQILKKNQV WTSIAPVSND ALIVNVGDLL HILSNGEFPS VYHRVLVDQT KHRVSLAYFF
301: GPQVDSMIVP LVSSEDNVGA IPKYRNVKVK EYLDLKAKHL EKVFSMIRF
001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE
Arabidopsis Description
GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.