Factsheet for TraesCS2B01G570800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G118350.1	Barley	cytosol	71.15	77.19
TraesCS2B01G570900.1	Wheat	cytosol	65.77	71.73
TraesCS3B01G141800.1	Wheat	cytosol	62.84	69.65
Zm00001d039634_P001	Maize	cytosol	60.88	65.18
Os01t0177400-01	Rice	golgi	58.68	64.86
EES00202	Sorghum	cytosol, peroxisome, plastid	59.66	62.72
CDX87302	Canola	cytosol	10.02	53.25
GSMUA_Achr5P09790_001	Banana	cytosol	39.12	43.24
CDY39986	Canola	cytosol	12.71	41.6
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	36.43	39.63
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	35.45	39.4
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	33.5	38.38
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	33.99	38.08
VIT_09s0002g05300.t01	Wine grape	cytosol	33.01	37.6
VIT_04s0008g04940.t01	Wine grape	cytosol, peroxisome, plastid	32.52	37.46
CDY37588	Canola	cytosol, nucleus, peroxisome	31.54	36.75
Bra008481.1-P	Field mustard	cytosol	31.54	36.75
KRH61843	Soybean	cytosol, peroxisome, plastid	30.56	36.66
KRH05073	Soybean	cytosol	31.3	36.57
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	33.25	36.36
PGSC0003DMT400014555	Potato	cytosol	31.54	36.24
CDY38660	Canola	cytosol	30.81	35.9
Solyc03g119910.2.1	Tomato	cytosol	31.05	35.77
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	32.52	35.75
AT1G80340.1	Thale cress	cytosol	30.32	35.73
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	31.3	35.65
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	31.05	35.47
CDY68965	Canola	cytosol, nucleus, peroxisome	31.05	35.47
KRH52518	Soybean	cytosol	30.07	35.45
Bra020909.1-P	Field mustard	cytosol	30.32	35.43
CDY39663	Canola	cytosol, nucleus, peroxisome	31.05	35.38
CDY36572	Canola	cytosol, nucleus, peroxisome	31.05	35.38
CDX81720	Canola	cytosol, nucleus, peroxisome	30.81	35.2
CDY37589	Canola	cytosol, nucleus, peroxisome	30.81	35.2
KRH09799	Soybean	cytosol, nucleus, peroxisome	30.32	35.13
AT1G80330.1	Thale cress	cytosol	30.32	34.93
AT1G15550.1	Thale cress	cytosol, nucleus, peroxisome	30.56	34.92
CDY38661	Canola	cytosol, nucleus, peroxisome	30.56	34.92
KRH16040	Soybean	cytosol	29.58	34.87
CDY31424	Canola	cytosol	29.83	34.86
CDX76441	Canola	cytosol	29.83	34.86
KRH23520	Soybean	cytosol	29.83	34.66
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	30.32	34.64
AT4G21690.1	Thale cress	cytosol	29.1	34.1
KRH44397	Soybean	cytosol	30.56	33.33
PGSC0003DMT400059595	Potato	cytosol	28.12	32.95
KRH47509	Soybean	cytosol	30.07	32.54
PGSC0003DMT400074744	Potato	cytosol	27.14	31.81
Solyc01g058250.1.1	Tomato	cytosol	26.89	31.61
PGSC0003DMT400086139	Potato	cytosol	26.65	31.23
Solyc05g052740.1.1	Tomato	cytosol	26.16	30.66
PGSC0003DMT400044153	Potato	nucleus	21.52	29.93
CDX87303	Canola	cytosol	11.49	26.86

Protein Annotations

EnsemblPlants:TraesCS2B01G570800.2	EnsemblPlantsGene:TraesCS2B01G570800	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF245	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr2B:-:761322698..761324007

Molecular Weight (calculated)

44784.6 Da

IEP (calculated)

6.363

GRAVY (calculated)

-0.216

Length

409 amino acids

Sequence
(BLAST)

001: MPTPSKLNKD PHNHYFDLGA ARQVPETHAW EGLHEHPVVD GGVGAGEDAV PVVDMQDPHA AEAVARASEQ WGAFLLQGHG VPRELLARVE AGIAGMFALP
101: KTDKMRAARQ GGDPYGYGLP HIALYFSKTM WSEGYSLSPT NLRPELRKIW PDAGHDYSQF CGVMEEFHKE MRALADKLME LFLVALGLTG PQIAGVEAEH
201: KLTETMSETI HLNWYVVQMA TLPAATRVST CLTCTLLHAC RYPKCPDPKR ALGMKAHTDS GFFALLMQSQ VPGLHLFRHG PPADRWVEVP AVPGALVVNI
301: GDLFQILTNG RFRSVYHRAV VNRDRERISL AYFLGPAANA KVGPLKEVVG GGRPAYRALT WPEYIIVRKE AFANGGADLE FTKGGTALEM VSINPDDDDG
401: MDDQGDISS

Best Arabidopsis Sequence Match ( AT1G80330.1 )
(BLAST)

001: MPSLAEEICI GNLGSLQTLP ESFTWKLTAA DSLLRPSSAV SFDAVEESIP VIDLSNPDVT TLIGDASKTW GAFQIANHGI SQKLLDDIES LSKTLFDMPS
101: ERKLEAASSD KGVSGYGEPR ISPFFEKKMW SEGFTIADDS YRNHFNTLWP HDHTKYCGII QEYVDEMEKL ASRLLYCILG SLGVTVEDIE WAHKLEKSGS
201: KVGRGAIRLN HYPVCPEPER AMGLAAHTDS TILTILHQSN TGGLQVFREE SGWVTVEPAP GVLVVNIGDL FHILSNGKIP SVVHRAKVNH TRSRISIAYL
301: WGGPAGDVQI APISKLTGPA EPSLYRSITW KEYLQIKYEV FDKAMDAIRV VNPTN

Arabidopsis Description

GA3OX4Gibberellin 3-beta-dioxygenase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C971]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.