Factsheet for Bra020909.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76441	Canola	cytosol	97.43	97.43
CDY31424	Canola	cytosol	96.57	96.57
AT4G21690.1	Thale cress	cytosol	84.57	84.81
VIT_04s0008g04940.t01	Wine grape	cytosol, peroxisome, plastid	46.0	45.35
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	43.71	42.74
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	43.71	42.74
GSMUA_Achr5P09790_001	Banana	cytosol	45.14	42.7
Bra008481.1-P	Field mustard	cytosol	42.57	42.45
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	42.86	41.78
KRH05073	Soybean	cytosol	41.71	41.71
PGSC0003DMT400059595	Potato	cytosol	41.43	41.55
KRH61843	Soybean	cytosol, peroxisome, plastid	40.29	41.35
PGSC0003DMT400086139	Potato	cytosol	41.14	41.26
KRH16040	Soybean	cytosol	40.86	41.21
KRH52518	Soybean	cytosol	40.86	41.21
Solyc05g052740.1.1	Tomato	cytosol	40.86	40.97
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	43.71	40.69
Solyc01g058250.1.1	Tomato	cytosol	40.0	40.23
PGSC0003DMT400074744	Potato	cytosol	39.43	39.54
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	39.71	38.94
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	40.86	38.86
Os01t0177400-01	Rice	golgi	37.14	35.14
PGSC0003DMT400044153	Potato	nucleus	28.57	34.01
Zm00001d039634_P001	Maize	cytosol	36.0	32.98
TraesCS3A01G122600.1	Wheat	cytosol	34.57	32.7
TraesCS3B01G141800.1	Wheat	cytosol	34.29	32.52
HORVU3Hr1G022840.8	Barley	cytosol	34.86	32.45
TraesCS3D01G124500.1	Wheat	cytosol	34.29	32.43
Os05t0178100-01	Rice	plasma membrane	34.86	32.02
TraesCS2B01G570900.1	Wheat	cytosol	34.0	31.73
EES00202	Sorghum	cytosol, peroxisome, plastid	35.14	31.62
TraesCS2D01G542100.1	Wheat	cytosol	33.14	31.1
TraesCS2A01G540400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	32.86	31.08
HORVU2Hr1G118350.1	Barley	cytosol	33.43	31.03
Zm00001d037627_P001	Maize	cytosol	32.86	30.75
TraesCS2B01G570800.2	Wheat	cytosol	35.43	30.32
KXG21453	Sorghum	cytosol, peroxisome, plastid	32.0	27.25
Os04t0517600-00	Rice	cytosol, peroxisome	12.57	21.46

Protein Annotations

MapMan:11.6.1.6	Gene3D:2.60.120.330	EnsemblPlantsGene:Bra020909	EnsemblPlants:Bra020909.1	EnsemblPlants:Bra020909.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4DWL5
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF95	SUPFAM:SSF51197	UniParc:UPI0002545A21	:	:	:

Description

AT4G21690 (E=3e-178) ATGA3OX3, GA3OX3 | GA3OX3 (GIBBERELLIN 3-OXIDASE 3); iron ion binding / oxidoreductase

Coordinates

chrA08:-:11280044..11282048

Molecular Weight (calculated)

39562.7 Da

IEP (calculated)

7.321

GRAVY (calculated)

-0.225

Length

350 amino acids

Sequence
(BLAST)

001: MSSVAQLFKN NPVNHDRIIP LDFTNTKTLP DSHVWSKPEL EPEPMTRPIP VISISSPEKV LLRHACEEWG VFHITDHGVP LSLLHNVECQ MKRLFSLPMH
101: RKILAVRSPD ESTGYGVVRI SMFYDKLMWS EGFSVMDSSL RRHATLIWPD DHAEFCNVIE EYQKEMANLS HRLVSMVMGS LGLTHKELRW LVPNITGSRT
201: DSSQSFLQLN SYPVCPDPDL AMGLAPHTDS SLLTILYQGN IPGLEIQNLQ AEKSRWIGVE PVEGGLVVIM GDLSHIISNG RFKSTMHRAV VNKTHHRVSA
301: AYFSGPPKNL QIGPLTADTD HPPLYRRLTW EEYLAAKATH FNKALSLFRC

Best Arabidopsis Sequence Match ( AT4G21690.1 )
(BLAST)

001: MSSVTQLFKN NPVNRDRIIP LDFTNTKTLP DSHVWSKPEP ETTSGPIPVI SLSNPEEHGL LRQACEEWGV FHITDHGVSH SLLHNVDCQM KRLFSLPMHR
101: KILAVRSPDE STGYGVVRIS MFYDKLMWSE GFSVMGSSLR RHATLLWPDD HAEFCNVMEE YQKAMDDLSH RLISMLMGSL GLTHEDLGWL VPDKTGSGTD
201: SIQSFLQLNS YPVCPDPHLA MGLAPHTDSS LLTILYQGNI PGLEIESPQE EGSRWIGVEP IEGSLVVIMG DLSHIISNGQ FRSTMHRAVV NKTHHRVSAA
301: YFAGPPKNLQ IGPLTSDKNH PPIYRRLIWE EYLAAKATHF NKALTLFRC

Arabidopsis Description

GA3OX3GA3OX3 [Source:UniProtKB/TrEMBL;Acc:A0A178V5K5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.