Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400086139 | Potato | cytosol | 93.98 | 93.98 |
| Solyc01g058250.1.1 | Tomato | cytosol | 83.38 | 83.62 |
| VIT_04s0008g04940.t01 | Wine grape | cytosol, peroxisome, plastid | 53.58 | 52.68 |
| KRH05073 | Soybean | cytosol | 47.56 | 47.43 |
| KRH61843 | Soybean | cytosol, peroxisome, plastid | 45.85 | 46.92 |
| KRH16040 | Soybean | cytosol | 45.85 | 46.11 |
| KRH52518 | Soybean | cytosol | 45.56 | 45.82 |
| Solyc03g119910.2.1 | Tomato | cytosol | 43.84 | 43.1 |
| Solyc06g066820.2.1 | Tomato | cytosol, peroxisome, plastid | 44.41 | 41.44 |
| CDY31424 | Canola | cytosol | 41.55 | 41.43 |
| AT4G21690.1 | Thale cress | cytosol | 40.97 | 40.97 |
| Bra020909.1-P | Field mustard | cytosol | 40.97 | 40.86 |
| CDX76441 | Canola | cytosol | 40.69 | 40.57 |
| GSMUA_Achr5P09790_001 | Banana | cytosol | 41.83 | 39.46 |
| GSMUA_Achr7P13240_001 | Banana | cytosol, nucleus, peroxisome | 41.83 | 38.83 |
| GSMUA_Achr4P08970_001 | Banana | cytosol, nucleus, peroxisome | 39.83 | 37.77 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plastid | 38.4 | 37.53 |
| Zm00001d039634_P001 | Maize | cytosol | 35.24 | 32.2 |
| Os01t0177400-01 | Rice | golgi | 34.1 | 32.16 |
| TraesCS3B01G141800.1 | Wheat | cytosol | 33.52 | 31.71 |
| TraesCS3A01G122600.1 | Wheat | cytosol | 33.24 | 31.35 |
| TraesCS3D01G124500.1 | Wheat | cytosol | 32.95 | 31.08 |
| HORVU3Hr1G022840.8 | Barley | cytosol | 33.24 | 30.85 |
| EES00202 | Sorghum | cytosol, peroxisome, plastid | 34.38 | 30.85 |
| TraesCS2A01G540400.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 32.09 | 30.27 |
| TraesCS2B01G570900.1 | Wheat | cytosol | 32.09 | 29.87 |
| TraesCS2D01G542100.1 | Wheat | cytosol | 31.52 | 29.49 |
| Os05t0178100-01 | Rice | plasma membrane | 32.09 | 29.4 |
| Zm00001d037627_P001 | Maize | cytosol | 31.23 | 29.14 |
| HORVU2Hr1G118350.1 | Barley | cytosol | 30.66 | 28.38 |
| TraesCS2B01G570800.2 | Wheat | cytosol | 30.66 | 26.16 |
| KXG21453 | Sorghum | cytosol, peroxisome, plastid | 30.37 | 25.79 |
| Os04t0517600-00 | Rice | cytosol, peroxisome | 10.6 | 18.05 |
Protein Annotations
| MapMan:11.6.1.6 | Gene3D:2.60.120.330 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0006629 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009686 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009987 |
| GO:GO:0016491 | GO:GO:0016707 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | UniProt:K4C1V4 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF197 | SUPFAM:SSF51197 | EnsemblPlantsGene:Solyc05g052740.1 | EnsemblPlants:Solyc05g052740.1.1 | UniParc:UPI0002765F12 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:62927457..62928745
Molecular Weight (calculated)
39988.1 Da
IEP (calculated)
7.137
GRAVY (calculated)
-0.188
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSTLEESF KENPQSPQHI LPIDFHLIQE VPNSHLWPNI NNFPINHDEK NPNVPIIDLL APNVVQLIGH ACKTWGIFQV INHGISLDFF DEVESQARRL
101: FALPVEEKVK VMRSTSGATG YGTARITPFF SKFMWHEGFT IMDSPLDHAK KLWPHDYQEF CDVMENYQKK MKALSFQLWL FILNYLQPSQ EHLINSFEFT
201: QALQLNSYPC CPNPNHALGL APHTDSLFLT ILHQTNNTKG LQILKKDQEW TSITPISNDA LIVNVGDLLH ILSNGEFPSV YHRVLVDQTK HRVSLAYFFG
301: PQVDSTIVPL VSFDKNVGVV VPKYRKVKVK EYLSLKAKHL EKVFSLIRS
101: FALPVEEKVK VMRSTSGATG YGTARITPFF SKFMWHEGFT IMDSPLDHAK KLWPHDYQEF CDVMENYQKK MKALSFQLWL FILNYLQPSQ EHLINSFEFT
201: QALQLNSYPC CPNPNHALGL APHTDSLFLT ILHQTNNTKG LQILKKDQEW TSITPISNDA LIVNVGDLLH ILSNGEFPSV YHRVLVDQTK HRVSLAYFFG
301: PQVDSTIVPL VSFDKNVGVV VPKYRKVKVK EYLSLKAKHL EKVFSLIRS
001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE
Arabidopsis Description
GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.