CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037627_P001	Maize	cytosol	68.13	74.87
Os05t0178100-01	Rice	plasma membrane	52.31	56.43
EES00202	Sorghum	cytosol, peroxisome, plastid	48.42	51.16
CDX87302	Canola	cytosol	8.76	46.75
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	34.79	40.06
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	36.5	39.89
GSMUA_Achr5P09790_001	Banana	cytosol	35.77	39.73
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	35.52	39.67
KRH61843	Soybean	cytosol, peroxisome, plastid	30.41	36.66
PGSC0003DMT400014555	Potato	cytosol	31.63	36.52
VIT_04s0008g04940.t01	Wine grape	cytosol, peroxisome, plastid	31.39	36.34
Solyc03g119910.2.1	Tomato	cytosol	30.9	35.77
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	31.63	35.62
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	32.36	35.56
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	32.12	35.48
KRH52518	Soybean	cytosol	29.93	35.45
CDY39986	Canola	cytosol	10.71	35.2
KRH16040	Soybean	cytosol	29.44	34.87
KRH05073	Soybean	cytosol	29.68	34.86
VIT_09s0002g05300.t01	Wine grape	cytosol	30.17	34.54
CDY37588	Canola	cytosol, nucleus, peroxisome	29.2	34.19
Bra008481.1-P	Field mustard	cytosol	29.2	34.19
KRH23520	Soybean	cytosol	29.2	34.09
KRH09799	Soybean	cytosol, nucleus, peroxisome	29.2	33.99
CDY38660	Canola	cytosol	28.47	33.33
CDY39663	Canola	cytosol, nucleus, peroxisome	28.95	33.15
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	28.71	32.87
AT1G15550.1	Thale cress	cytosol, nucleus, peroxisome	28.47	32.68
AT1G80330.1	Thale cress	cytosol	28.22	32.68
CDY36572	Canola	cytosol, nucleus, peroxisome	28.47	32.59
CDY68965	Canola	cytosol, nucleus, peroxisome	28.22	32.4
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	28.22	32.4
CDX81720	Canola	cytosol, nucleus, peroxisome	28.22	32.4
AT1G80340.1	Thale cress	cytosol	27.25	32.28
KRH44397	Soybean	cytosol	29.44	32.27
Bra020909.1-P	Field mustard	cytosol	27.25	32.0
PGSC0003DMT400086139	Potato	cytosol	27.01	31.81
CDY38661	Canola	cytosol, nucleus, peroxisome	27.49	31.56
CDY37589	Canola	cytosol, nucleus, peroxisome	27.49	31.56
CDX76441	Canola	cytosol	26.76	31.43
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	27.25	31.28
AT4G21690.1	Thale cress	cytosol	26.52	31.23
KRH47509	Soybean	cytosol	28.71	31.22
CDY31424	Canola	cytosol	26.52	31.14
PGSC0003DMT400074744	Potato	cytosol	26.28	30.95
PGSC0003DMT400059595	Potato	cytosol	26.28	30.95
Solyc01g058250.1.1	Tomato	cytosol	25.79	30.46
Solyc05g052740.1.1	Tomato	cytosol	25.79	30.37
PGSC0003DMT400044153	Potato	nucleus	20.68	28.91
CDX87303	Canola	cytosol	10.95	25.71

Protein Annotations

MapMan:50.1.13	UniProt:A0A1B6P725	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPR005123
EnsemblPlants:KXG21453	ProteinID:KXG21453	ProteinID:KXG21453.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF245	EnsemblPlantsGene:SORBI_3009G064700	SUPFAM:SSF51197	UniParc:UPI00081ABE40
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:6887949..6889275

Molecular Weight (calculated)

44603.5 Da

IEP (calculated)

6.922

GRAVY (calculated)

-0.133

Length

411 amino acids

Sequence
(BLAST)

001: MMPSSSSSAS TPAAASGGLF ELGSAASVPE THAWPGVNEH PSVESAGRDA VPVVDMGMGG PDDADAAARA VARAAEEWGA FLLVGHGVPR GVAARAEAQV
101: ARLFALPAPD KARAARRRRA AAAAAAGYGM PPLALRFSKL MWSEAYTFPA AAVRDEFRRV WPDAGDDYLR FWYVRTPVWY VTRATLPHVD LHLHVHACMR
201: APSDVMEEYD REMRALGGRL LDLFFMALGG GLTDDDQIAG GETTTTERKI RDNLTAMMHP ILYPKCPEPE RAMGLAPHTD SGFITLITQS AGVPGLQLLR
301: RGPDRWVTVP APPGAFVVVL GDLFQVLTNG RYRSALHRAV VNRERDRISV PYFLGPPDGM KVAPLASALL PGRRKAAFRA VTWPEYMELK HKVLGTDTSA
401: LEMLQLDEEE M

Best Arabidopsis Sequence Match ( AT1G80330.1 )
(BLAST)

001: MPSLAEEICI GNLGSLQTLP ESFTWKLTAA DSLLRPSSAV SFDAVEESIP VIDLSNPDVT TLIGDASKTW GAFQIANHGI SQKLLDDIES LSKTLFDMPS
101: ERKLEAASSD KGVSGYGEPR ISPFFEKKMW SEGFTIADDS YRNHFNTLWP HDHTKYCGII QEYVDEMEKL ASRLLYCILG SLGVTVEDIE WAHKLEKSGS
201: KVGRGAIRLN HYPVCPEPER AMGLAAHTDS TILTILHQSN TGGLQVFREE SGWVTVEPAP GVLVVNIGDL FHILSNGKIP SVVHRAKVNH TRSRISIAYL
301: WGGPAGDVQI APISKLTGPA EPSLYRSITW KEYLQIKYEV FDKAMDAIRV VNPTN

Arabidopsis Description

GA3OX4Gibberellin 3-beta-dioxygenase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C971]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.