Factsheet for Bra008481.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37588	Canola	cytosol, nucleus, peroxisome	97.44	97.44
AT1G80330.1	Thale cress	cytosol	81.48	80.56
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	55.84	54.6
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	55.56	54.47
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	52.99	51.96
Solyc03g119910.2.1	Tomato	cytosol	52.14	51.55
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	54.13	50.8
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	52.42	50.41
PGSC0003DMT400014555	Potato	cytosol	51.0	50.28
KRH44397	Soybean	cytosol	52.14	48.8
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	51.57	48.66
KRH47509	Soybean	cytosol	51.85	48.15
KRH09799	Soybean	cytosol, nucleus, peroxisome	48.15	47.88
KRH23520	Soybean	cytosol	47.58	47.44
VIT_09s0002g05300.t01	Wine grape	cytosol	47.86	46.8
GSMUA_Achr5P09790_001	Banana	cytosol	46.44	44.05
Bra020909.1-P	Field mustard	cytosol	42.45	42.57
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	44.73	41.76
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	39.32	38.66
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	40.46	38.59
Zm00001d039634_P001	Maize	cytosol	37.04	34.03
TraesCS3B01G141800.1	Wheat	cytosol	35.61	33.88
Os01t0177400-01	Rice	golgi	35.61	33.78
TraesCS3A01G122600.1	Wheat	cytosol	35.61	33.78
TraesCS3D01G124500.1	Wheat	cytosol	35.33	33.51
HORVU3Hr1G022840.8	Barley	cytosol	35.9	33.51
TraesCS2A01G540400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	34.47	32.7
EES00202	Sorghum	cytosol, peroxisome, plastid	35.9	32.39
HORVU2Hr1G118350.1	Barley	cytosol	34.76	32.36
Os05t0178100-01	Rice	plasma membrane	35.04	32.28
TraesCS2D01G542100.1	Wheat	cytosol	33.9	31.9
TraesCS2B01G570800.2	Wheat	cytosol	36.75	31.54
Zm00001d037627_P001	Maize	cytosol	33.33	31.28
TraesCS2B01G570900.1	Wheat	cytosol	33.33	31.2
KXG21453	Sorghum	cytosol, peroxisome, plastid	34.19	29.2
Os04t0517600-00	Rice	cytosol, peroxisome	14.53	24.88

Protein Annotations

MapMan:11.6.1.6	Gene3D:2.60.120.330	EnsemblPlantsGene:Bra008481	EnsemblPlants:Bra008481.1	EnsemblPlants:Bra008481.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009686	GO:GO:0009987	GO:GO:0016491	GO:GO:0016707	GO:GO:0046872
GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4CW84	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF95
SUPFAM:SSF51197	UniParc:UPI0002546C4A	:	:	:	:

Description

AT1G80330 (E=4e-169) ATGA3OX4, GA3OX4 | GA3OX4 (GIBBERELLIN 3-OXIDASE 4); gibberellin 3-beta-dioxygenase

Coordinates

chrA02:+:15903681..15904927

Molecular Weight (calculated)

38601.3 Da

IEP (calculated)

5.708

GRAVY (calculated)

-0.093

Length

351 amino acids

Sequence
(BLAST)

001: MPSINEDVSI GNLGSLQTLP DSFTWKLTAA DSILPPSSAA VKESIPVIDL SDPDVTNLLG NACKTWGAFQ IANHGVSQSL LDDVESLSKT FFDMPSERKL
101: EAASSNKGVS GYGEPRISLF FEKKMWSEGL TIADGSYRNQ FLTIWPRDYT KYCGIIEEYK GEMEKLASRL LSCILGSLGV TVDDIEWAKK TEKSESKMGQ
201: SVIRLNHYPV CPEPERAMGL AAHTDSCLLT ILHQSNMGGL QVFKEESGWV TVEPIPGVLV VNIGDLFHIL SNGKFPSVVH RARVNRTKSR ISIAYLWGGP
301: AGEVEISPIS KIVGPVGPCL YRPVTWSEYL RIKFEVFDKA LDAIRVVNAT N

Best Arabidopsis Sequence Match ( AT1G80330.1 )
(BLAST)

001: MPSLAEEICI GNLGSLQTLP ESFTWKLTAA DSLLRPSSAV SFDAVEESIP VIDLSNPDVT TLIGDASKTW GAFQIANHGI SQKLLDDIES LSKTLFDMPS
101: ERKLEAASSD KGVSGYGEPR ISPFFEKKMW SEGFTIADDS YRNHFNTLWP HDHTKYCGII QEYVDEMEKL ASRLLYCILG SLGVTVEDIE WAHKLEKSGS
201: KVGRGAIRLN HYPVCPEPER AMGLAAHTDS TILTILHQSN TGGLQVFREE SGWVTVEPAP GVLVVNIGDL FHILSNGKIP SVVHRAKVNH TRSRISIAYL
301: WGGPAGDVQI APISKLTGPA EPSLYRSITW KEYLQIKYEV FDKAMDAIRV VNPTN

Arabidopsis Description

GA3OX4Gibberellin 3-beta-dioxygenase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C971]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.