Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38660 | Canola | cytosol | 81.41 | 82.34 |
| Bra008481.1-P | Field mustard | cytosol | 80.56 | 81.48 |
| CDY37588 | Canola | cytosol, nucleus, peroxisome | 80.0 | 80.91 |
| AT1G80340.1 | Thale cress | cytosol | 52.68 | 53.89 |
| AT1G15550.1 | Thale cress | cytosol, nucleus, peroxisome | 53.52 | 53.07 |
| PGSC0003DMT400014555 | Potato | cytosol | 52.39 | 52.25 |
| Solyc06g066820.2.1 | Tomato | cytosol, peroxisome, plastid | 54.93 | 52.14 |
| Solyc03g119910.2.1 | Tomato | cytosol | 51.83 | 51.83 |
| PGSC0003DMT400042582 | Potato | cytosol, nucleus, peroxisome | 52.68 | 50.27 |
| KRH09799 | Soybean | cytosol, nucleus, peroxisome | 49.01 | 49.29 |
| KRH23520 | Soybean | cytosol | 48.45 | 48.86 |
| VIT_09s0002g05270.t01 | Wine grape | cytosol, nucleus, peroxisome | 50.14 | 48.77 |
| KRH44397 | Soybean | cytosol | 50.7 | 48.0 |
| VIT_09s0002g05300.t01 | Wine grape | cytosol | 47.61 | 47.08 |
| KRH47509 | Soybean | cytosol | 49.86 | 46.83 |
| GSMUA_Achr5P09790_001 | Banana | cytosol | 43.66 | 41.89 |
| AT4G21690.1 | Thale cress | cytosol | 40.85 | 41.55 |
| GSMUA_Achr7P13240_001 | Banana | cytosol, nucleus, peroxisome | 43.38 | 40.96 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plastid | 39.15 | 38.94 |
| GSMUA_Achr4P08970_001 | Banana | cytosol, nucleus, peroxisome | 40.28 | 38.86 |
| Os01t0177400-01 | Rice | golgi | 34.37 | 32.97 |
| TraesCS3B01G141800.1 | Wheat | cytosol | 34.08 | 32.79 |
| TraesCS3A01G122600.1 | Wheat | cytosol | 34.08 | 32.7 |
| TraesCS2A01G540400.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 33.8 | 32.43 |
| TraesCS3D01G124500.1 | Wheat | cytosol | 33.8 | 32.43 |
| Zm00001d039634_P001 | Maize | cytosol | 34.65 | 32.2 |
| HORVU3Hr1G022840.8 | Barley | cytosol | 34.08 | 32.18 |
| TraesCS2D01G542100.1 | Wheat | cytosol | 33.52 | 31.9 |
| HORVU2Hr1G118350.1 | Barley | cytosol | 33.24 | 31.3 |
| TraesCS2B01G570900.1 | Wheat | cytosol | 32.96 | 31.2 |
| EES00202 | Sorghum | cytosol, peroxisome, plastid | 33.8 | 30.85 |
| Zm00001d037627_P001 | Maize | cytosol | 32.39 | 30.75 |
| Os05t0178100-01 | Rice | plasma membrane | 32.68 | 30.45 |
| TraesCS2B01G570800.2 | Wheat | cytosol | 34.93 | 30.32 |
| KXG21453 | Sorghum | cytosol, peroxisome, plastid | 32.68 | 28.22 |
| Os04t0517600-00 | Rice | cytosol, peroxisome | 14.37 | 24.88 |
Protein Annotations
| MapMan:11.6.1.6 | Gene3D:2.60.120.330 | EntrezGene:844373 | ProteinID:AAG52440.1 | ProteinID:AEE36388.1 | ArrayExpress:AT1G80330 |
| EnsemblPlantsGene:AT1G80330 | RefSeq:AT1G80330 | TAIR:AT1G80330 | RefSeq:AT1G80330-TAIR-G | EnsemblPlants:AT1G80330.1 | TAIR:AT1G80330.1 |
| Symbol:ATGA3OX4 | Unigene:At.33922 | InterPro:DIOX_N | EMBL:DQ459178 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0006629 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009686 | GO:GO:0009719 | GO:GO:0009740 |
| GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016707 | GO:GO:0046872 | GO:GO:0051213 | GO:GO:0055114 |
| InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | RefSeq:NP_178149.1 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 |
| PFAM:PF14226 | PO:PO:0009001 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009046 | PO:PO:0009066 |
| PO:PO:0020023 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF95 | UniProt:Q9C971 |
| SUPFAM:SSF51197 | UniParc:UPI00000484C5 | : | : | : | : |
Description
GA3OX4Gibberellin 3-beta-dioxygenase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C971]
Coordinates
chr1:-:30198061..30199537
Molecular Weight (calculated)
39154.6 Da
IEP (calculated)
5.583
GRAVY (calculated)
-0.167
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSLAEEICI GNLGSLQTLP ESFTWKLTAA DSLLRPSSAV SFDAVEESIP VIDLSNPDVT TLIGDASKTW GAFQIANHGI SQKLLDDIES LSKTLFDMPS
101: ERKLEAASSD KGVSGYGEPR ISPFFEKKMW SEGFTIADDS YRNHFNTLWP HDHTKYCGII QEYVDEMEKL ASRLLYCILG SLGVTVEDIE WAHKLEKSGS
201: KVGRGAIRLN HYPVCPEPER AMGLAAHTDS TILTILHQSN TGGLQVFREE SGWVTVEPAP GVLVVNIGDL FHILSNGKIP SVVHRAKVNH TRSRISIAYL
301: WGGPAGDVQI APISKLTGPA EPSLYRSITW KEYLQIKYEV FDKAMDAIRV VNPTN
101: ERKLEAASSD KGVSGYGEPR ISPFFEKKMW SEGFTIADDS YRNHFNTLWP HDHTKYCGII QEYVDEMEKL ASRLLYCILG SLGVTVEDIE WAHKLEKSGS
201: KVGRGAIRLN HYPVCPEPER AMGLAAHTDS TILTILHQSN TGGLQVFREE SGWVTVEPAP GVLVVNIGDL FHILSNGKIP SVVHRAKVNH TRSRISIAYL
301: WGGPAGDVQI APISKLTGPA EPSLYRSITW KEYLQIKYEV FDKAMDAIRV VNPTN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.