Factsheet for TraesCS2B01G570900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G542100.1	Wheat	cytosol	81.6	82.04
TraesCS2A01G540400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	78.93	80.0
TraesCS3B01G141800.1	Wheat	cytosol	64.8	65.85
TraesCS2B01G570800.2	Wheat	cytosol	71.73	65.77
Os01t0177400-01	Rice	golgi	62.93	63.78
Zm00001d039634_P001	Maize	cytosol	64.27	63.09
EES00202	Sorghum	cytosol, peroxisome, plastid	62.93	60.67
CDX87302	Canola	cytosol	9.87	48.05
GSMUA_Achr5P09790_001	Banana	cytosol	40.8	41.35
CDY39986	Canola	cytosol	13.07	39.2
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	37.87	38.59
VIT_04s0008g04940.t01	Wine grape	cytosol, peroxisome, plastid	36.27	38.31
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	36.27	38.1
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	36.8	37.81
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	37.87	37.77
VIT_09s0002g05300.t01	Wine grape	cytosol	35.73	37.33
KRH61843	Soybean	cytosol, peroxisome, plastid	33.07	36.36
PGSC0003DMT400014555	Potato	cytosol	34.13	35.96
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	35.73	35.83
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	34.13	35.75
CDY68965	Canola	cytosol, nucleus, peroxisome	34.13	35.75
Solyc03g119910.2.1	Tomato	cytosol	33.6	35.49
CDX81720	Canola	cytosol, nucleus, peroxisome	33.87	35.47
KRH52518	Soybean	cytosol	32.8	35.45
CDY39663	Canola	cytosol, nucleus, peroxisome	33.87	35.38
AT1G15550.1	Thale cress	cytosol, nucleus, peroxisome	33.6	35.2
KRH09799	Soybean	cytosol, nucleus, peroxisome	33.07	35.13
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	33.6	35.1
CDY36572	Canola	cytosol, nucleus, peroxisome	33.33	34.82
KRH05073	Soybean	cytosol	32.27	34.57
KRH23520	Soybean	cytosol	32.27	34.38
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	33.87	34.14
Bra020909.1-P	Field mustard	cytosol	31.73	34.0
CDY31424	Canola	cytosol	31.73	34.0
CDX76441	Canola	cytosol	31.47	33.71
CDY38660	Canola	cytosol	31.47	33.62
CDY37588	Canola	cytosol, nucleus, peroxisome	31.47	33.62
AT4G21690.1	Thale cress	cytosol	31.2	33.52
KRH16040	Soybean	cytosol	30.93	33.43
KRH44397	Soybean	cytosol	33.33	33.33
Bra008481.1-P	Field mustard	cytosol	31.2	33.33
AT1G80340.1	Thale cress	cytosol	30.67	33.14
KRH47509	Soybean	cytosol	33.33	33.07
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	31.47	32.96
AT1G80330.1	Thale cress	cytosol	31.2	32.96
CDY37589	Canola	cytosol, nucleus, peroxisome	30.93	32.4
PGSC0003DMT400059595	Potato	cytosol	30.13	32.38
CDY38661	Canola	cytosol, nucleus, peroxisome	30.67	32.12
Solyc05g052740.1.1	Tomato	cytosol	29.87	32.09
PGSC0003DMT400086139	Potato	cytosol	29.87	32.09
Solyc01g058250.1.1	Tomato	cytosol	29.6	31.9
PGSC0003DMT400074744	Potato	cytosol	29.33	31.52
PGSC0003DMT400044153	Potato	nucleus	23.47	29.93
CDX87303	Canola	cytosol	12.53	26.86

Protein Annotations

EnsemblPlants:TraesCS2B01G570900.1	EnsemblPlantsGene:TraesCS2B01G570900	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF245	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:11.6.1.6	:	:

Description

No Description!

Coordinates

chr2B:-:761327834..761329174

Molecular Weight (calculated)

41346.0 Da

IEP (calculated)

5.577

GRAVY (calculated)

-0.309

Length

375 amino acids

Sequence
(BLAST)

001: MSAPSQLSKD PRNNYFDFGA ARQVPETHMW EGLYEHPVVD GGVRAGEDAV PVVDMQDPRA AEAVARASEQ WGVFLLEGHG IPSELLARVE AGIAGMFALP
101: TPEKMRAERQ DGEPYGYGLP HIASYSSKAT WSEGYTLSPA SLRAELRRVW PDAGEDYRHF CDVMEEFHRQ MRAVADKLTV LFLAALGLAG EQIAAVEAER
201: KIVETMSETV TMHLNWYPKC PDPKRALGMT THTDSGFFTF VMQSHVPGMQ LFRRGPDRWV GVPPGALIVN IGDLFQILTN GRFRSAYHRA VVNRDNARVS
301: VAYHLGPPAD VKVAPLREAV GAGKPAYRTV TWREYIVVRK EAFATGGSAL EMVSLSPDDH DDEGDGADHI SEIPS

Best Arabidopsis Sequence Match ( AT4G21690.1 )
(BLAST)

001: MSSVTQLFKN NPVNRDRIIP LDFTNTKTLP DSHVWSKPEP ETTSGPIPVI SLSNPEEHGL LRQACEEWGV FHITDHGVSH SLLHNVDCQM KRLFSLPMHR
101: KILAVRSPDE STGYGVVRIS MFYDKLMWSE GFSVMGSSLR RHATLLWPDD HAEFCNVMEE YQKAMDDLSH RLISMLMGSL GLTHEDLGWL VPDKTGSGTD
201: SIQSFLQLNS YPVCPDPHLA MGLAPHTDSS LLTILYQGNI PGLEIESPQE EGSRWIGVEP IEGSLVVIMG DLSHIISNGQ FRSTMHRAVV NKTHHRVSAA
301: YFAGPPKNLQ IGPLTSDKNH PPIYRRLIWE EYLAAKATHF NKALTLFRC

Arabidopsis Description

GA3OX3GA3OX3 [Source:UniProtKB/TrEMBL;Acc:A0A178V5K5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.