CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09799	Soybean	cytosol, nucleus, peroxisome	93.18	92.92
KRH47509	Soybean	cytosol	71.59	66.67
KRH44397	Soybean	cytosol	71.02	66.67
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	65.91	63.56
CDX87302	Canola	cytosol	13.64	62.34
PGSC0003DMT400014555	Potato	cytosol	62.5	61.8
Solyc03g119910.2.1	Tomato	cytosol	62.22	61.69
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	63.92	60.16
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	63.35	59.95
CDX81720	Canola	cytosol, nucleus, peroxisome	59.09	58.1
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	59.09	58.1
CDY68965	Canola	cytosol, nucleus, peroxisome	59.09	58.1
CDY39663	Canola	cytosol, nucleus, peroxisome	58.52	57.38
AT1G15550.1	Thale cress	cytosol, nucleus, peroxisome	58.24	57.26
CDY36572	Canola	cytosol, nucleus, peroxisome	57.95	56.82
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	57.95	56.82
CDY39986	Canola	cytosol	19.6	55.2
VIT_09s0002g05300.t01	Wine grape	cytosol	56.25	55.15
AT1G80340.1	Thale cress	cytosol	53.69	54.47
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	54.83	53.91
CDY38661	Canola	cytosol, nucleus, peroxisome	54.55	53.63
CDY37589	Canola	cytosol, nucleus, peroxisome	54.26	53.35
CDX87303	Canola	cytosol	25.57	51.43
GSMUA_Achr5P09790_001	Banana	cytosol	51.42	48.92
AT1G80330.1	Thale cress	cytosol	48.86	48.45
Bra008481.1-P	Field mustard	cytosol	47.44	47.58
CDY37588	Canola	cytosol, nucleus, peroxisome	47.16	47.29
CDY38660	Canola	cytosol	46.59	46.72
KRH61843	Soybean	cytosol, peroxisome, plastid	45.17	46.63
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	45.45	44.82
KRH05073	Soybean	cytosol	44.32	44.57
KRH52518	Soybean	cytosol	43.75	44.38
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	47.16	44.15
KRH16040	Soybean	cytosol	43.47	44.09
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	45.74	43.75
Zm00001d039634_P001	Maize	cytosol	39.2	36.13
Os01t0177400-01	Rice	golgi	37.78	35.95
TraesCS3B01G141800.1	Wheat	cytosol	36.93	35.23
TraesCS3D01G124500.1	Wheat	cytosol	36.93	35.14
TraesCS3A01G122600.1	Wheat	cytosol	36.93	35.14
HORVU3Hr1G022840.8	Barley	cytosol	36.93	34.57
EES00202	Sorghum	cytosol, peroxisome, plastid	38.07	34.45
TraesCS2A01G540400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	35.8	34.05
TraesCS2D01G542100.1	Wheat	cytosol	35.51	33.51
TraesCS2B01G570900.1	Wheat	cytosol	34.38	32.27
Zm00001d037627_P001	Maize	cytosol	33.52	31.55
Os05t0178100-01	Rice	plasma membrane	33.81	31.23
HORVU2Hr1G118350.1	Barley	cytosol	33.24	31.03
TraesCS2B01G570800.2	Wheat	cytosol	34.66	29.83
KXG21453	Sorghum	cytosol, peroxisome, plastid	34.09	29.2
Os04t0517600-00	Rice	cytosol, peroxisome	13.64	23.41

Protein Annotations

EntrezGene:100776755	MapMan:11.6.1.6	Gene3D:2.60.120.330	EMBL:ACUP02008471	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_13G361700
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009416	GO:GO:0009628	GO:GO:0009686
GO:GO:0009719	GO:GO:0009740	GO:GO:0009987	GO:GO:0016491	GO:GO:0016707	GO:GO:0046872
GO:GO:0055114	UniProt:I1M5P4	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KRH23520
ProteinID:KRH23520	ProteinID:KRH23520.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF95	SUPFAM:SSF51197	UniParc:UPI000233B542	:	:

Description

hypothetical protein

Coordinates

chr13:+:44856120..44858325

Molecular Weight (calculated)

39247.3 Da

IEP (calculated)

8.397

GRAVY (calculated)

-0.256

Length

352 amino acids

Sequence
(BLAST)

001: MPSLSEAYRA HPVHVQHKHP DLNSLQELPE SYTWTHHSHD DHTPAASNES VPVIDLNDPN ASKLIHHACI TWGAYQVVNH AIPMSLLQDI QWVGETLFSL
101: PCHQKQKAAR SPDGADGYGL ARISSFFPKL MWSEGFTIVG SPLEHFRQLW PQDYHKYCDI VKRYDEAMKK LVGKLMWLML DSLGITKEDL KWAGSKGQFK
201: KTCAALQLNS YPTCPDPDRA MGLAAHTDST LLTILYQNNI SGLQVHRKGG GWVTVAPVPE GLVINVGDLL HILSNGLYPS VLHRVLVNRI QQRLSVAYLC
301: GPPPNVEICP HAKLVGPNKP PLYKAVTWNE YLGTKAKHFN KALSTVRLCA PS

Best Arabidopsis Sequence Match ( AT1G15550.1 )
(BLAST)

001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE

Arabidopsis Description

GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.