Factsheet for GSMUA_AchrUn_randomP03870_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	60.22	57.18
CDX87302	Canola	cytosol	11.2	51.95
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	49.86	48.37
GSMUA_Achr5P09790_001	Banana	cytosol	49.86	48.11
KRH09799	Soybean	cytosol, nucleus, peroxisome	45.66	46.18
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	46.5	45.48
KRH23520	Soybean	cytosol	44.82	45.45
VIT_09s0002g05300.t01	Wine grape	cytosol	45.38	45.13
Solyc03g119910.2.1	Tomato	cytosol	43.98	44.23
PGSC0003DMT400014555	Potato	cytosol	43.98	44.1
CDY68965	Canola	cytosol, nucleus, peroxisome	43.98	43.85
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	43.98	43.85
CDX81720	Canola	cytosol, nucleus, peroxisome	43.7	43.58
AT1G15550.1	Thale cress	cytosol, nucleus, peroxisome	43.42	43.3
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	43.42	43.18
CDY36572	Canola	cytosol, nucleus, peroxisome	43.14	42.9
CDY39663	Canola	cytosol, nucleus, peroxisome	43.14	42.9
VIT_04s0008g04940.t01	Wine grape	cytosol, peroxisome, plastid	42.3	42.54
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	44.54	42.51
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	44.26	42.47
CDY39986	Canola	cytosol	14.85	42.4
AT1G80340.1	Thale cress	cytosol	41.18	42.36
KRH44397	Soybean	cytosol	43.98	41.87
CDX87303	Canola	cytosol	20.45	41.71
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	41.46	41.34
KRH47509	Soybean	cytosol	43.7	41.27
CDY38661	Canola	cytosol, nucleus, peroxisome	41.18	41.06
CDY37589	Canola	cytosol, nucleus, peroxisome	41.18	41.06
KRH61843	Soybean	cytosol, peroxisome, plastid	38.66	40.47
AT4G21690.1	Thale cress	cytosol	39.5	40.4
CDY31424	Canola	cytosol	39.22	40.0
KRH52518	Soybean	cytosol	38.66	39.77
Bra020909.1-P	Field mustard	cytosol	38.94	39.71
CDY38660	Canola	cytosol	38.66	39.32
Bra008481.1-P	Field mustard	cytosol	38.66	39.32
Os01t0177400-01	Rice	golgi	40.62	39.19
AT1G80330.1	Thale cress	cytosol	38.94	39.15
CDX76441	Canola	cytosol	38.38	39.14
CDY37588	Canola	cytosol, nucleus, peroxisome	38.38	39.03
TraesCS3B01G141800.1	Wheat	cytosol	40.34	39.02
Zm00001d039634_P001	Maize	cytosol	41.46	38.74
Solyc05g052740.1.1	Tomato	cytosol	37.53	38.4
TraesCS3D01G124500.1	Wheat	cytosol	39.78	38.38
KRH05073	Soybean	cytosol	37.53	38.29
PGSC0003DMT400059595	Potato	cytosol	37.25	38.11
TraesCS3A01G122600.1	Wheat	cytosol	39.5	38.11
KRH16040	Soybean	cytosol	36.69	37.75
PGSC0003DMT400086139	Potato	cytosol	36.69	37.54
HORVU3Hr1G022840.8	Barley	cytosol	39.5	37.5
Solyc01g058250.1.1	Tomato	cytosol	36.41	37.36
EES00202	Sorghum	cytosol, peroxisome, plastid	40.62	37.28
TraesCS2A01G540400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	38.38	37.03
PGSC0003DMT400074744	Potato	cytosol	35.57	36.39
TraesCS2B01G570900.1	Wheat	cytosol	38.1	36.27
TraesCS2D01G542100.1	Wheat	cytosol	37.53	35.92
HORVU2Hr1G118350.1	Barley	cytosol	37.82	35.81
Zm00001d037627_P001	Maize	cytosol	37.25	35.56
KXG21453	Sorghum	cytosol, peroxisome, plastid	40.06	34.79
Os05t0178100-01	Rice	plasma membrane	36.41	34.12
TraesCS2B01G570800.2	Wheat	cytosol	38.38	33.5
PGSC0003DMT400044153	Potato	nucleus	27.17	32.99
Os04t0517600-00	Rice	cytosol, peroxisome	12.61	21.95

Protein Annotations

MapMan:11.6.1.6	Gene3D:2.60.120.330	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG03870_001
EnsemblPlants:GSMUA_AchrUn_randomP03870_001	EnsemblPlants:GSMUA_AchrUn_randomT03870_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0U649
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF95
SUPFAM:SSF51197	UniParc:UPI0002966B13	SEG:seg	:	:	:

Description

Putative Gibberellin 3-beta-dioxygenase 1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG03870_001]

Coordinates

chrchrUn_random:+:17581786..17582964

Molecular Weight (calculated)

39806.5 Da

IEP (calculated)

6.184

GRAVY (calculated)

-0.246

Length

357 amino acids

Sequence
(BLAST)

001: MASLTARPLH QLELNTLSHV PDAYAWSALN DLPYGDDVVP VVDLASPDAV GLIGRACEEW GAFQITGHGI PLHLLDRVEA QTRLLFSLPT AQKLKAARGP
101: GSLSGYGLAN TSSFYSNIFW SEGFTIIGSP YDDARKLWPE DYEEYCCVME EYNRLIKALS GRLLRSMMLS LGLHEEDMDW AGLLSKADPV LQLNYYPACP
201: EPDRAIGIAH HTDSSFITIL YQSSGESGLQ LVHREDAAGP ARWVTVPPRR GALVVNVGDL CEIVFNGRIR SVMHRAIVNR TQTRVSVAYF CGPPRQFNVA
301: PIGKLVGPNE RPAYRAMSWP EFLSLKRKLY NKTLEYLRSP EEEAEDHKNT SEMANQK

Best Arabidopsis Sequence Match ( AT1G15550.1 )
(BLAST)

001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE

Arabidopsis Description

GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.