Factsheet for GSMUA_Achr7P13240_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	57.18	60.22
CDX87302	Canola	cytosol	11.44	55.84
GSMUA_Achr5P09790_001	Banana	cytosol	52.66	53.51
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	50.53	51.63
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	49.47	50.96
Solyc03g119910.2.1	Tomato	cytosol	47.61	50.42
PGSC0003DMT400014555	Potato	cytosol	47.34	50.0
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	48.94	49.2
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	48.67	49.19
KRH09799	Soybean	cytosol, nucleus, peroxisome	45.74	48.73
AT1G80340.1	Thale cress	cytosol	44.41	48.13
CDX81720	Canola	cytosol, nucleus, peroxisome	45.48	47.77
AT1G15550.1	Thale cress	cytosol, nucleus, peroxisome	45.48	47.77
CDY68965	Canola	cytosol, nucleus, peroxisome	45.48	47.77
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	45.48	47.77
CDY39663	Canola	cytosol, nucleus, peroxisome	45.48	47.63
VIT_09s0002g05300.t01	Wine grape	cytosol	45.48	47.63
VIT_04s0008g04940.t01	Wine grape	cytosol, peroxisome, plastid	44.95	47.61
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	45.21	47.35
CDY39986	Canola	cytosol	15.69	47.2
KRH23520	Soybean	cytosol	44.15	47.16
CDY36572	Canola	cytosol, nucleus, peroxisome	44.95	47.08
KRH44397	Soybean	cytosol	46.28	46.4
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	43.88	46.09
KRH47509	Soybean	cytosol	46.28	46.03
CDY38661	Canola	cytosol, nucleus, peroxisome	43.62	45.81
CDY37589	Canola	cytosol, nucleus, peroxisome	43.62	45.81
CDY37588	Canola	cytosol, nucleus, peroxisome	41.76	44.73
Bra008481.1-P	Field mustard	cytosol	41.76	44.73
CDY31424	Canola	cytosol	41.49	44.57
CDX76441	Canola	cytosol	41.22	44.29
CDY38660	Canola	cytosol	41.22	44.16
Bra020909.1-P	Field mustard	cytosol	40.69	43.71
KRH61843	Soybean	cytosol, peroxisome, plastid	39.63	43.7
AT4G21690.1	Thale cress	cytosol	40.43	43.55
AT1G80330.1	Thale cress	cytosol	40.96	43.38
KRH52518	Soybean	cytosol	39.89	43.23
TraesCS3B01G141800.1	Wheat	cytosol	42.02	42.82
PGSC0003DMT400059595	Potato	cytosol	39.36	42.41
Os01t0177400-01	Rice	golgi	41.49	42.16
TraesCS3A01G122600.1	Wheat	cytosol	41.49	42.16
PGSC0003DMT400086139	Potato	cytosol	39.1	42.12
KRH05073	Soybean	cytosol	39.1	42.0
Solyc05g052740.1.1	Tomato	cytosol	38.83	41.83
KRH16040	Soybean	cytosol	38.56	41.79
HORVU3Hr1G022840.8	Barley	cytosol	41.76	41.76
Zm00001d039634_P001	Maize	cytosol	42.29	41.62
PGSC0003DMT400074744	Potato	cytosol	38.56	41.55
Solyc01g058250.1.1	Tomato	cytosol	38.3	41.38
TraesCS3D01G124500.1	Wheat	cytosol	40.69	41.35
Os05t0178100-01	Rice	plasma membrane	40.96	40.42
EES00202	Sorghum	cytosol, peroxisome, plastid	41.76	40.36
CDX87303	Canola	cytosol	18.62	40.0
TraesCS2A01G540400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	38.83	39.46
TraesCS2D01G542100.1	Wheat	cytosol	38.3	38.61
HORVU2Hr1G118350.1	Barley	cytosol	38.56	38.46
TraesCS2B01G570900.1	Wheat	cytosol	37.77	37.87
Zm00001d037627_P001	Maize	cytosol	36.97	37.17
KXG21453	Sorghum	cytosol, peroxisome, plastid	39.89	36.5
TraesCS2B01G570800.2	Wheat	cytosol	39.63	36.43
PGSC0003DMT400044153	Potato	nucleus	28.46	36.39
Os04t0517600-00	Rice	cytosol, peroxisome	14.89	27.32

Protein Annotations

MapMan:11.6.1.6	Gene3D:2.60.120.330	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G13240_001
EnsemblPlants:GSMUA_Achr7P13240_001	EnsemblPlants:GSMUA_Achr7T13240_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0TH61
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF95	SUPFAM:SSF51197	UniParc:UPI000294DA9C	SEG:seg	:	:

Description

Gibberellin 3-beta-dioxygenase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G13240_001]

Coordinates

chr7:-:10639164..10640374

Molecular Weight (calculated)

41483.4 Da

IEP (calculated)

6.563

GRAVY (calculated)

-0.236

Length

376 amino acids

Sequence
(BLAST)

001: MPSLSDQPLI HHLQQFEFKT LTEVPDSHAW PVVNDHPHGD DAVPVIDLAC PDAARLIGQA CEEWGAFQIT GHGVPVDLLD RLEAQTRRLF SLPTGQKLKA
101: ARSPGGVTGY GIANISAFFS KLFWSEGFTI VGSPHDEARK LWPDDSAEFC GAIEEYTSWM KPLGCRLMLL MLASLGLSEG EIDWAVPSND TTHEAPAPVI
201: QLNSYPACPD PDRAMGLAEH TDSSLFTVLY QGSVRGLQLL HGNHPTRRAR WVTVPPLPGA LVVNVGDLSH ILSNGRFQSV THRAIVNRTQ TRISVAYFYG
301: PPAHFKIAPI EKLMGPQQGP AYRAVTWPEY LTLKRRLYNQ ALASIRLPTE GEEESRTNTS EIITAAYTRR HGEAKV

Best Arabidopsis Sequence Match ( AT1G15550.1 )
(BLAST)

001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE

Arabidopsis Description

GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.